RNA–Protein interactions for RNA: ENSMUST00000000964.5

Hoxa1-201, Transcript of Homeobox protein Hox-A1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxa1, Length 2,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa1-201ENSMUST00000000964 4933428G20RikQ9D3X4 101 aa3.96□□□□□ -1.78
Hoxa1-201ENSMUST00000000964 Sprr2kO70562 68 aa3.95□□□□□ -1.78
Hoxa1-201ENSMUST00000000964 Lce1lQ9D1G7 135 aa3.95□□□□□ -1.78
Hoxa1-201ENSMUST00000000964 Sprr2iO70560 76 aa3.95□□□□□ -1.78
Hoxa1-201ENSMUST00000000964 Gm10272F7CZ33 110 aa3.94□□□□□ -1.78
Hoxa1-201ENSMUST00000000964 Krtap19-9aF8WH65 55 aa3.93□□□□□ -1.78
Hoxa1-201ENSMUST00000000964 2300003K06RikA2A4M0 262 aa3.88□□□□□ -1.79
Hoxa1-201ENSMUST00000000964 Krtap20-2E9Q0A8 60 aa3.86□□□□□ -1.79
Hoxa1-201ENSMUST00000000964 Lce1hQ9D6R3 140 aa3.86□□□□□ -1.79
Hoxa1-201ENSMUST00000000964 Lce1eQ9D139 143 aa3.83□□□□□ -1.8
Hoxa1-201ENSMUST00000000964 Lce1iQ9D6P5 149 aa3.83□□□□□ -1.8
Hoxa1-201ENSMUST00000000964 Krtap8-1O08633 61 aa3.82□□□□□ -1.8
Hoxa1-201ENSMUST00000000964 Mt2P02798 61 aa3.82□□□□□ -1.8
Hoxa1-201ENSMUST00000000964 Lce1a1Q9CQH5 143 aa3.82□□□□□ -1.8
Hoxa1-201ENSMUST00000000964 Lce1dQ9D731 133 aa3.8□□□□□ -1.8
Hoxa1-201ENSMUST00000000964 Spink7Q6IE32 76 aa3.79□□□□□ -1.8
Hoxa1-201ENSMUST00000000964 Eppk1Q8R0W0 6548 aa3.75□□□□□ -1.81
Hoxa1-201ENSMUST00000000964 Lce1a2Q9D1K4 149 aa3.74□□□□□ -1.81
Hoxa1-201ENSMUST00000000964 Sprr2gO70558 76 aa3.72□□□□□ -1.81
Hoxa1-201ENSMUST00000000964 Sprr2fO70557 76 aa3.69□□□□□ -1.82
Hoxa1-201ENSMUST00000000964 Gm11938Q9D3H4 131 aa3.69□□□□□ -1.82
Hoxa1-201ENSMUST00000000964 Krtap22-2J3QNX6 67 aa3.67□□□□□ -1.82
Hoxa1-201ENSMUST00000000964 Gm10024A0A0A0MQA4 119 aa3.51□□□□□ -1.85
Hoxa1-201ENSMUST00000000964 Sprr2dO70555 85 aa3.5□□□□□ -1.85
Hoxa1-201ENSMUST00000000964 Gm11559Q9D3H7 191 aa3.48□□□□□ -1.85
Hoxa1-201ENSMUST00000000964 Krtap5-2Q9D5Z7 189 aa3.48□□□□□ -1.85
Hoxa1-201ENSMUST00000000964 Gm11639A0A1D5RLM8 5808 aa3.44□□□□□ -1.86
Hoxa1-201ENSMUST00000000964 Sprr2eO70556 76 aa3.39□□□□□ -1.87
Hoxa1-201ENSMUST00000000964 Gm4553A0A1B0GSA9 284 aa3.37□□□□□ -1.87
Hoxa1-201ENSMUST00000000964 Gm11568A2A4M2 211 aa3.37□□□□□ -1.87
Hoxa1-201ENSMUST00000000964 Gm11554B1AQB2 190 aa3.36□□□□□ -1.87
Hoxa1-201ENSMUST00000000964 Kmt2dQ6PDK2 5588 aa3.35□□□□□ -1.87
Hoxa1-201ENSMUST00000000964 Lce1kJ3QP15 125 aa3.29□□□□□ -1.88
Hoxa1-201ENSMUST00000000964 Gpr98Q8VHN7 6298 aaKnown RBP3.27□□□□□ -1.89
Hoxa1-201ENSMUST00000000964 Gm2431E9Q8S1 172 aa3.25□□□□□ -1.89
Hoxa1-201ENSMUST00000000964 Krtap19-9bQ99NG9 58 aa3.24□□□□□ -1.89
Hoxa1-201ENSMUST00000000964 Krtap9-1Q64526 186 aa3.24□□□□□ -1.89
Hoxa1-201ENSMUST00000000964 Krtap19-4Q925H7 84 aa3.24□□□□□ -1.89
Hoxa1-201ENSMUST00000000964 Krtap4-16Q91W93 202 aa3.23□□□□□ -1.89
Hoxa1-201ENSMUST00000000964 Gm45337A0A1B0GS71 263 aa3.2□□□□□ -1.9
Hoxa1-201ENSMUST00000000964 Gm10142J3KMP7 120 aa3.2□□□□□ -1.9
Hoxa1-201ENSMUST00000000964 Gm10100J3QK64 120 aa3.19□□□□□ -1.9
Hoxa1-201ENSMUST00000000964 Sprr2hO70559 108 aa3.12□□□□□ -1.91
Hoxa1-201ENSMUST00000000964 Macf1Q9QXZ0 7354 aaKnown RBP3.11□□□□□ -1.91
Hoxa1-201ENSMUST00000000964 Lce1cQ9D1C5 147 aa3.11□□□□□ -1.91
Hoxa1-201ENSMUST00000000964 Gm39115A0A1B0GSH7 232 aa3.1□□□□□ -1.91
Hoxa1-201ENSMUST00000000964 Gm40460A0A1B0GR10 244 aa3.09□□□□□ -1.92
Hoxa1-201ENSMUST00000000964 Gm7579A0A1B0GRJ4 243 aa3.09□□□□□ -1.92
Hoxa1-201ENSMUST00000000964 Krtap5-5Q2TA51 241 aa3.09□□□□□ -1.92
Hoxa1-201ENSMUST00000000964 Krtap5-4Q62220 223 aa3.09□□□□□ -1.92
Hoxa1-201ENSMUST00000000964 Lce1fB9EJP6 147 aa3.05□□□□□ -1.92
Hoxa1-201ENSMUST00000000964 Lce3bQ9CQM7 98 aa3.05□□□□□ -1.92
Hoxa1-201ENSMUST00000000964 Muc19Q6PZE0 7524 aa3.05□□□□□ -1.92
Hoxa1-201ENSMUST00000000964 Syne1Q6ZWR6 8799 aa3.03□□□□□ -1.92
Hoxa1-201ENSMUST00000000964 Lce3dE9Q8V1 98 aa3.03□□□□□ -1.92
Hoxa1-201ENSMUST00000000964 Gm10153A0A1B0GRL1 320 aa3.02□□□□□ -1.93
Hoxa1-201ENSMUST00000000964 Lce3eF8VQJ0 98 aa3.02□□□□□ -1.93
Hoxa1-201ENSMUST00000000964 Lce3fQ6PAI4 98 aa3.02□□□□□ -1.93
Hoxa1-201ENSMUST00000000964 Lce3cQ91V05 98 aa2.98□□□□□ -1.93
Hoxa1-201ENSMUST00000000964 Gm45618A0A1B0GSA0 219 aa2.98□□□□□ -1.93
Hoxa1-201ENSMUST00000000964 Lce3aQ497I5 98 aa2.97□□□□□ -1.93
Hoxa1-201ENSMUST00000000964 Hmcn1D3YXG0 5634 aa2.93□□□□□ -1.94
Hoxa1-201ENSMUST00000000964 Mt1P02802 61 aaKnown RBP2.86□□□□□ -1.95
Hoxa1-201ENSMUST00000000964 DstQ91ZU6 7393 aaKnown RBP2.86□□□□□ -1.95
Hoxa1-201ENSMUST00000000964 NebE9Q1W3 7152 aa2.85□□□□□ -1.95
Hoxa1-201ENSMUST00000000964 AhnakE9Q616 5656 aaKnown RBP2.78□□□□□ -1.97
Hoxa1-201ENSMUST00000000964 Gm11567Q9D141 195 aa2.75□□□□□ -1.97
Hoxa1-201ENSMUST00000000964 Mt3P28184 68 aa2.71□□□□□ -1.98
Hoxa1-201ENSMUST00000000964 Gm29735A0A1B0GT06 219 aa2.69□□□□□ -1.98
Hoxa1-201ENSMUST00000000964 ObscnA2AAJ9 8891 aaKnown RBP2.65□□□□□ -1.99
Hoxa1-201ENSMUST00000000964 Muc16A0A140LJ72 8478 aa2.14□□□□□ -2.07
Hoxa1-201ENSMUST00000000964 Sprr2bO70554 98 aa2.08□□□□□ -2.08
Hoxa1-201ENSMUST00000000964 Krtap5-1Q64507 230 aa2.01□□□□□ -2.09
Hoxa1-201ENSMUST00000000964 1110025L11RikO09048 78 aa1.99□□□□□ -2.09
Hoxa1-201ENSMUST00000000964 Krtap6-5Q925H3 78 aa1.99□□□□□ -2.09
Hoxa1-201ENSMUST00000000964 Gm4559A4IF42 199 aa1.93□□□□□ -2.1
Hoxa1-201ENSMUST00000000964 Phgr1Q8K0G7 91 aa1.88□□□□□ -2.11
Hoxa1-201ENSMUST00000000964 Gm10229O08631 77 aa1.8□□□□□ -2.12
Hoxa1-201ENSMUST00000000964 Krtap6-2O08884 159 aa1.65□□□□□ -2.15
Hoxa1-201ENSMUST00000000964 Krtap21-1Q925H4 128 aa1.6□□□□□ -2.15
Retrieved 80 of 22,080 RNA–protein pairs in 1185.9 ms