RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 USP14P54578 494 aa13.75□□□□□ -0.21
SMARCE1-214ENST00000578112 ATP8B2P98198 1209 aa13.75□□□□□ -0.21
SMARCE1-214ENST00000578112 LBX2Q6XYB7 198 aa13.75□□□□□ -0.21
SMARCE1-214ENST00000578112 SH3RF3Q8TEJ3 882 aaPredicted RBP13.75□□□□□ -0.21
SMARCE1-214ENST00000578112 RGS2P41220 211 aa13.75□□□□□ -0.21
SMARCE1-214ENST00000578112 ZKSCAN2Q63HK3 967 aa13.75□□□□□ -0.21
SMARCE1-214ENST00000578112 USP6NLQ92738 828 aa13.75□□□□□ -0.21
SMARCE1-214ENST00000578112 HERVK_113P62684 666 aa13.74□□□□□ -0.21
SMARCE1-214ENST00000578112 CCNA1P78396 465 aa13.74□□□□□ -0.21
SMARCE1-214ENST00000578112 CRACR2BQ8N4Y2 399 aaPredicted RBP13.74□□□□□ -0.21
SMARCE1-214ENST00000578112 GDF15Q99988 308 aa13.74□□□□□ -0.21
SMARCE1-214ENST00000578112 ZBTB21Q9ULJ3 1066 aa13.74□□□□□ -0.21
SMARCE1-214ENST00000578112 PAWRQ96IZ0 340 aaKnown RBP13.74□□□□□ -0.21
SMARCE1-214ENST00000578112 RABGAP1Q9Y3P9 1069 aa13.74□□□□□ -0.21
SMARCE1-214ENST00000578112 ZKSCAN1P17029 563 aaPredicted RBP13.73□□□□□ -0.21
SMARCE1-214ENST00000578112 LRIT3Q3SXY7 679 aa13.73□□□□□ -0.21
SMARCE1-214ENST00000578112 TATDN1Q6P1N9 297 aa13.73□□□□□ -0.21
SMARCE1-214ENST00000578112 ERC1Q8IUD2 1116 aa13.73□□□□□ -0.21
SMARCE1-214ENST00000578112 APBA2Q99767 749 aa13.73□□□□□ -0.21
SMARCE1-214ENST00000578112 MYH1P12882 1939 aa13.73□□□□□ -0.21
SMARCE1-214ENST00000578112 PNMA6EA0A0J9YXQ4 647 aa13.73□□□□□ -0.21
SMARCE1-214ENST00000578112 MSCO60682 206 aa13.73□□□□□ -0.21
SMARCE1-214ENST00000578112 MTMR2Q13614 643 aa13.73□□□□□ -0.21
SMARCE1-214ENST00000578112 MORN1Q5T089 497 aa13.73□□□□□ -0.21
SMARCE1-214ENST00000578112 USP17L15C9J2P7 530 aa13.72□□□□□ -0.21
SMARCE1-214ENST00000578112 USP17L13C9JLJ4 530 aa13.72□□□□□ -0.21
SMARCE1-214ENST00000578112 USP17L11C9JVI0 530 aa13.72□□□□□ -0.21
SMARCE1-214ENST00000578112 USP17L18D6R9N7 530 aa13.72□□□□□ -0.21
SMARCE1-214ENST00000578112 USP17L22D6RA61 530 aa13.72□□□□□ -0.21
SMARCE1-214ENST00000578112 USP17L17D6RBQ6 530 aa13.72□□□□□ -0.21
SMARCE1-214ENST00000578112 USP17L19D6RCP7 530 aa13.72□□□□□ -0.21
SMARCE1-214ENST00000578112 USP17L20D6RJB6 530 aa13.72□□□□□ -0.21
SMARCE1-214ENST00000578112 USP17L24Q0WX57 530 aa13.72□□□□□ -0.21
SMARCE1-214ENST00000578112 RRP1BQ14684 758 aaKnown RBP13.72□□□□□ -0.21
SMARCE1-214ENST00000578112 TBC1D9Q6ZT07 1266 aa13.72□□□□□ -0.21
SMARCE1-214ENST00000578112 PLEKHH3Q7Z736 793 aa13.72□□□□□ -0.21
SMARCE1-214ENST00000578112 TTC6Q86TZ1 520 aa13.72□□□□□ -0.21
SMARCE1-214ENST00000578112 AATFQ9NY61 560 aaKnown RBP eCLIP13.72□□□□□ -0.21
SMARCE1-214ENST00000578112 FRMPD3Q5JV73 1810 aa13.72□□□□□ -0.21
SMARCE1-214ENST00000578112 ERVK-9P63128 1117 aa13.72□□□□□ -0.21
SMARCE1-214ENST00000578112 ERVK-24P63145 666 aa13.72□□□□□ -0.21
SMARCE1-214ENST00000578112 TRIB2Q92519 343 aa13.72□□□□□ -0.21
SMARCE1-214ENST00000578112 SLC15A5A6NIM6 579 aa13.71□□□□□ -0.21
SMARCE1-214ENST00000578112 CYP2E1P05181 493 aaPredicted RBP13.71□□□□□ -0.21
SMARCE1-214ENST00000578112 COL6A1P12109 1028 aa13.71□□□□□ -0.21
SMARCE1-214ENST00000578112 HSP90AB4PQ58FF6 505 aa13.71□□□□□ -0.21
SMARCE1-214ENST00000578112 PI16Q6UXB8 463 aa13.71□□□□□ -0.21
SMARCE1-214ENST00000578112 TGFBRAP1Q8WUH2 860 aa13.71□□□□□ -0.21
SMARCE1-214ENST00000578112 P2RX7Q99572 595 aaKnown RBP13.71□□□□□ -0.21
SMARCE1-214ENST00000578112 KIAA1683Q9H0B3 1180 aa13.71□□□□□ -0.21
SMARCE1-214ENST00000578112 DNAJC18Q9H819 358 aa13.71□□□□□ -0.21
SMARCE1-214ENST00000578112 HOXC6P09630 235 aa13.71□□□□□ -0.22
SMARCE1-214ENST00000578112 MNX1P50219 401 aaPredicted RBP13.71□□□□□ -0.22
SMARCE1-214ENST00000578112 OS9Q13438 667 aaPredicted RBP13.71□□□□□ -0.22
SMARCE1-214ENST00000578112 CCDC84Q86UT8 332 aaPredicted RBP13.71□□□□□ -0.22
SMARCE1-214ENST00000578112 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.71□□□□□ -0.22
SMARCE1-214ENST00000578112 RBPJLQ9UBG7 517 aa13.71□□□□□ -0.22
SMARCE1-214ENST00000578112 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.71□□□□□ -0.22
SMARCE1-214ENST00000578112 FAM196BA6NMK8 535 aa13.7□□□□□ -0.22
SMARCE1-214ENST00000578112 ECM2O94769 699 aaPredicted RBP13.7□□□□□ -0.22
SMARCE1-214ENST00000578112 TTF1Q15361 905 aaPredicted RBP13.7□□□□□ -0.22
SMARCE1-214ENST00000578112 CCAR1Q8IX12 1150 aaKnown RBP13.7□□□□□ -0.22
SMARCE1-214ENST00000578112 DBNDD2Q9BQY9 259 aa13.7□□□□□ -0.22
SMARCE1-214ENST00000578112 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.7□□□□□ -0.22
SMARCE1-214ENST00000578112 DOCK3Q8IZD9 2030 aa13.7□□□□□ -0.22
SMARCE1-214ENST00000578112 PRKAR2AP13861 404 aaKnown RBP13.69□□□□□ -0.22
SMARCE1-214ENST00000578112 MAP3K12Q12852 859 aa13.69□□□□□ -0.22
SMARCE1-214ENST00000578112 MAP2K5Q13163 448 aa13.69□□□□□ -0.22
SMARCE1-214ENST00000578112 MFSD14CQ5VZR4 134 aa13.69□□□□□ -0.22
SMARCE1-214ENST00000578112 GPR142Q7Z601 462 aa13.69□□□□□ -0.22
SMARCE1-214ENST00000578112 MAPKAPK5Q8IW41 473 aa13.69□□□□□ -0.22
SMARCE1-214ENST00000578112 A0A0G2JMZ2 1700 aa13.69□□□□□ -0.22
SMARCE1-214ENST00000578112 NAV1Q8NEY1 1877 aa13.69□□□□□ -0.22
SMARCE1-214ENST00000578112 TMEM57Q8N5G2 664 aa13.69□□□□□ -0.22
SMARCE1-214ENST00000578112 CABP5Q9NP86 173 aa13.69□□□□□ -0.22
SMARCE1-214ENST00000578112 EMILIN3Q9NT22 766 aa13.69□□□□□ -0.22
SMARCE1-214ENST00000578112 SERPINB13Q9UIV8 391 aa13.69□□□□□ -0.22
SMARCE1-214ENST00000578112 SURF6O75683 361 aaKnown RBP13.68□□□□□ -0.22
SMARCE1-214ENST00000578112 CYP7A1P22680 504 aa13.68□□□□□ -0.22
SMARCE1-214ENST00000578112 FAM109BQ6ICB4 259 aaPredicted RBP13.68□□□□□ -0.22
SMARCE1-214ENST00000578112 CATSPERGQ6ZRH7 1159 aa13.68□□□□□ -0.22
SMARCE1-214ENST00000578112 C7orf61Q8IZ16 206 aa13.68□□□□□ -0.22
SMARCE1-214ENST00000578112 SHCBP1Q8NEM2 672 aa13.68□□□□□ -0.22
SMARCE1-214ENST00000578112 SLURP2P0DP57 97 aa13.68□□□□□ -0.22
SMARCE1-214ENST00000578112 MS4A1P11836 297 aa13.68□□□□□ -0.22
SMARCE1-214ENST00000578112 ZAP70P43403 619 aa13.68□□□□□ -0.22
SMARCE1-214ENST00000578112 TDHQ8IZJ6 230 aa13.68□□□□□ -0.22
SMARCE1-214ENST00000578112 CYP2B6P20813 491 aa13.67□□□□□ -0.22
SMARCE1-214ENST00000578112 USP5P45974 858 aa13.67□□□□□ -0.22
SMARCE1-214ENST00000578112 DIS3LQ8TF46 1054 aaKnown RBP13.67□□□□□ -0.22
SMARCE1-214ENST00000578112 TXNRD2Q9NNW7 524 aa13.67□□□□□ -0.22
SMARCE1-214ENST00000578112 PIH1D3Q9NQM4 214 aaKnown RBP13.67□□□□□ -0.22
SMARCE1-214ENST00000578112 PTPREP23469 700 aa13.67□□□□□ -0.22
SMARCE1-214ENST00000578112 CACNB2Q08289 660 aaPredicted RBP13.67□□□□□ -0.22
SMARCE1-214ENST00000578112 OLFML2BQ68BL8 750 aa13.67□□□□□ -0.22
SMARCE1-214ENST00000578112 ADGRA1Q86SQ6 560 aa13.67□□□□□ -0.22
SMARCE1-214ENST00000578112 MB21D1Q8N884 522 aa13.67□□□□□ -0.22
SMARCE1-214ENST00000578112 FRAT1Q92837 279 aaPredicted RBP13.67□□□□□ -0.22
SMARCE1-214ENST00000578112 CWC22Q9HCG8 908 aaKnown RBP13.67□□□□□ -0.22
SMARCE1-214ENST00000578112 STAP2Q9UGK3 403 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms