RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 NPM3O75607 178 aaKnown RBP25.06■■□□□ 1.6
PSEN1-225ENST00000560005 ERICH6Q7L0X2 663 aa25.06■■□□□ 1.6
PSEN1-225ENST00000560005 ZNF384Q8TF68 577 aa25.06■■□□□ 1.6
PSEN1-225ENST00000560005 USP17L5A8MUK1 530 aa25.05■■□□□ 1.6
PSEN1-225ENST00000560005 PEX10O60683 326 aa25.05■■□□□ 1.6
PSEN1-225ENST00000560005 CAP2P40123 477 aa25.05■■□□□ 1.6
PSEN1-225ENST00000560005 SH3D19Q5HYK7 790 aa25.05■■□□□ 1.6
PSEN1-225ENST00000560005 COL6A1P12109 1028 aa25.04■■□□□ 1.6
PSEN1-225ENST00000560005 IRX3P78415 501 aaPredicted RBP25.04■■□□□ 1.6
PSEN1-225ENST00000560005 NUDT12Q9BQG2 462 aa25.04■■□□□ 1.6
PSEN1-225ENST00000560005 AS3MTQ9HBK9 375 aa25.04■■□□□ 1.6
PSEN1-225ENST00000560005 DNAH12Q6ZR08 3092 aa25.04■■□□□ 1.6
PSEN1-225ENST00000560005 COL2A1P02458 1487 aaPredicted RBP25.03■■□□□ 1.6
PSEN1-225ENST00000560005 XRCC5P13010 732 aaKnown RBP25.03■■□□□ 1.6
PSEN1-225ENST00000560005 MDM2Q00987 491 aaPredicted RBP25.03■■□□□ 1.6
PSEN1-225ENST00000560005 MTMR2Q13614 643 aa25.03■■□□□ 1.6
PSEN1-225ENST00000560005 RPAP2Q8IXW5 612 aaPredicted RBP25.03■■□□□ 1.6
PSEN1-225ENST00000560005 SOCS4Q8WXH5 440 aa25.03■■□□□ 1.6
PSEN1-225ENST00000560005 COPRSQ9NQ92 184 aa25.03■■□□□ 1.6
PSEN1-225ENST00000560005 ZKSCAN1P17029 563 aaPredicted RBP25.02■■□□□ 1.6
PSEN1-225ENST00000560005 LRRC26Q2I0M4 334 aa25.02■■□□□ 1.6
PSEN1-225ENST00000560005 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.02■■□□□ 1.6
PSEN1-225ENST00000560005 P2RX7Q99572 595 aaKnown RBP25.02■■□□□ 1.6
PSEN1-225ENST00000560005 TXNRD2Q9NNW7 524 aa25.02■■□□□ 1.6
PSEN1-225ENST00000560005 A0A1B0GUL7 405 aa25.01■■□□□ 1.59
PSEN1-225ENST00000560005 CACNB2Q08289 660 aaPredicted RBP25.01■■□□□ 1.59
PSEN1-225ENST00000560005 GPRC5AQ8NFJ5 357 aa25.01■■□□□ 1.59
PSEN1-225ENST00000560005 XAGE2Q96GT9 111 aa25.01■■□□□ 1.59
PSEN1-225ENST00000560005 CCND3P30281 292 aaPredicted RBP25■■□□□ 1.59
PSEN1-225ENST00000560005 HERVK_113P62684 666 aa25■■□□□ 1.59
PSEN1-225ENST00000560005 NSUN4Q96CB9 384 aaKnown RBP25■■□□□ 1.59
PSEN1-225ENST00000560005 WDR18Q9BV38 432 aa25■■□□□ 1.59
PSEN1-225ENST00000560005 TMOD4Q9NZQ9 345 aa25■■□□□ 1.59
PSEN1-225ENST00000560005 HERC5Q9UII4 1024 aaKnown RBP25■■□□□ 1.59
PSEN1-225ENST00000560005 EYSQ5T1H1 3165 aa25■■□□□ 1.59
PSEN1-225ENST00000560005 MAP4K4O95819 1239 aaPredicted RBP24.99■■□□□ 1.59
PSEN1-225ENST00000560005 IGHDP01880 384 aa24.99■■□□□ 1.59
PSEN1-225ENST00000560005 GNAI2P04899 355 aa24.99■■□□□ 1.59
PSEN1-225ENST00000560005 LDHCP07864 332 aa24.99■■□□□ 1.59
PSEN1-225ENST00000560005 HOXA7P31268 230 aaPredicted RBP24.99■■□□□ 1.59
PSEN1-225ENST00000560005 BACE1P56817 501 aa24.99■■□□□ 1.59
PSEN1-225ENST00000560005 GSTO1P78417 241 aa24.99■■□□□ 1.59
PSEN1-225ENST00000560005 LHX8Q68G74 356 aa24.99■■□□□ 1.59
PSEN1-225ENST00000560005 TBC1D9Q6ZT07 1266 aa24.99■■□□□ 1.59
PSEN1-225ENST00000560005 TRMT44Q8IYL2 757 aaKnown RBP24.99■■□□□ 1.59
PSEN1-225ENST00000560005 GUCD1Q96NT3 240 aa24.99■■□□□ 1.59
PSEN1-225ENST00000560005 HMG20BQ9P0W2 317 aa24.99■■□□□ 1.59
PSEN1-225ENST00000560005 CCL14Q16627 93 aa24.98■■□□□ 1.59
PSEN1-225ENST00000560005 PI16Q6UXB8 463 aa24.98■■□□□ 1.59
PSEN1-225ENST00000560005 TEX11Q8IYF3 940 aa24.98■■□□□ 1.59
PSEN1-225ENST00000560005 POTEB2H3BUK9 544 aa24.97■■□□□ 1.59
PSEN1-225ENST00000560005 MAPK4P31152 587 aa24.97■■□□□ 1.59
PSEN1-225ENST00000560005 TFCP2Q12800 502 aa24.97■■□□□ 1.59
PSEN1-225ENST00000560005 USP6NLQ92738 828 aa24.97■■□□□ 1.59
PSEN1-225ENST00000560005 FAM161BQ96MY7 647 aa24.97■■□□□ 1.59
PSEN1-225ENST00000560005 RAI14Q9P0K7 980 aa24.97■■□□□ 1.59
PSEN1-225ENST00000560005 RBPJLQ9UBG7 517 aa24.97■■□□□ 1.59
PSEN1-225ENST00000560005 AKAP2Q9Y2D5 859 aa24.97■■□□□ 1.59
PSEN1-225ENST00000560005 HMMRO75330 724 aa24.96■■□□□ 1.59
PSEN1-225ENST00000560005 ASNSP08243 561 aa24.96■■□□□ 1.59
PSEN1-225ENST00000560005 RGS2P41220 211 aa24.96■■□□□ 1.59
PSEN1-225ENST00000560005 JAG1P78504 1218 aa24.96■■□□□ 1.59
PSEN1-225ENST00000560005 Q3C1V9 767 aa24.96■■□□□ 1.59
PSEN1-225ENST00000560005 CCAR1Q8IX12 1150 aaKnown RBP24.96■■□□□ 1.59
PSEN1-225ENST00000560005 SPATA5Q8NB90 893 aa24.96■■□□□ 1.59
PSEN1-225ENST00000560005 PORCNQ9H237 461 aa24.96■■□□□ 1.59
PSEN1-225ENST00000560005 PI4KBQ9UBF8 816 aa24.96■■□□□ 1.59
PSEN1-225ENST00000560005 ERVK-9P63128 1117 aa24.95■■□□□ 1.58
PSEN1-225ENST00000560005 ERVK-24P63145 666 aa24.95■■□□□ 1.58
PSEN1-225ENST00000560005 FAM109BQ6ICB4 259 aaPredicted RBP24.95■■□□□ 1.58
PSEN1-225ENST00000560005 GPR142Q7Z601 462 aa24.95■■□□□ 1.58
PSEN1-225ENST00000560005 SH3RF3Q8TEJ3 882 aaPredicted RBP24.95■■□□□ 1.58
PSEN1-225ENST00000560005 NEUROD6Q96NK8 337 aa24.95■■□□□ 1.58
PSEN1-225ENST00000560005 MEIS3Q99687 375 aa24.95■■□□□ 1.58
PSEN1-225ENST00000560005 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.95■■□□□ 1.58
PSEN1-225ENST00000560005 SPTBN5Q9NRC6 3674 aaKnown RBP24.95■■□□□ 1.58
PSEN1-225ENST00000560005 SIPA1L1O43166 1804 aa24.95■■□□□ 1.58
PSEN1-225ENST00000560005 SHROOM1Q2M3G4 852 aaPredicted RBP24.94■■□□□ 1.58
PSEN1-225ENST00000560005 MORN1Q5T089 497 aa24.94■■□□□ 1.58
PSEN1-225ENST00000560005 APBA2Q99767 749 aa24.94■■□□□ 1.58
PSEN1-225ENST00000560005 PAGR1Q9BTK6 254 aa24.94■■□□□ 1.58
PSEN1-225ENST00000560005 C19orf81C9J6K1 198 aa24.93■■□□□ 1.58
PSEN1-225ENST00000560005 PLEKHH3Q7Z736 793 aa24.93■■□□□ 1.58
PSEN1-225ENST00000560005 LBHD1Q9BQE6 289 aaPredicted RBP24.93■■□□□ 1.58
PSEN1-225ENST00000560005 USP17L10C9JJH3 530 aa24.92■■□□□ 1.58
PSEN1-225ENST00000560005 GDF11O95390 407 aa24.92■■□□□ 1.58
PSEN1-225ENST00000560005 GORABQ5T7V8 394 aa24.92■■□□□ 1.58
PSEN1-225ENST00000560005 SMC5Q8IY18 1101 aa24.92■■□□□ 1.58
PSEN1-225ENST00000560005 SENP6Q9GZR1 1112 aaPredicted RBP24.92■■□□□ 1.58
PSEN1-225ENST00000560005 DHX36Q9H2U1 1008 aaKnown RBP24.92■■□□□ 1.58
PSEN1-225ENST00000560005 DNAJC18Q9H819 358 aa24.92■■□□□ 1.58
PSEN1-225ENST00000560005 FRMPD3Q5JV73 1810 aa24.91■■□□□ 1.58
PSEN1-225ENST00000560005 PRUNE2Q8WUY3 3088 aa24.91■■□□□ 1.58
PSEN1-225ENST00000560005 POTEEQ6S8J3 1075 aa24.91■■□□□ 1.58
PSEN1-225ENST00000560005 NOL10Q9BSC4 688 aaKnown RBP24.91■■□□□ 1.58
PSEN1-225ENST00000560005 CWC22Q9HCG8 908 aaKnown RBP24.91■■□□□ 1.58
PSEN1-225ENST00000560005 MAST2Q6P0Q8 1798 aa24.9■■□□□ 1.58
PSEN1-225ENST00000560005 SRGAP3O43295 1099 aa24.9■■□□□ 1.58
PSEN1-225ENST00000560005 CRACR2BQ8N4Y2 399 aaPredicted RBP24.9■■□□□ 1.58
PSEN1-225ENST00000560005 GTF3C2Q8WUA4 911 aaPredicted RBP24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms