RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 RNF123Q5XPI4 1314 aa7.75□□□□□ -1.17
TMEM260-212ENST00000556810 PRR36Q9H6K5 1346 aa7.75□□□□□ -1.17
TMEM260-212ENST00000556810 KIF1AQ12756 1690 aa7.74□□□□□ -1.17
TMEM260-212ENST00000556810 BRWD3Q6RI45 1802 aa7.74□□□□□ -1.17
TMEM260-212ENST00000556810 FAM177BA6PVY3 158 aa7.74□□□□□ -1.17
TMEM260-212ENST00000556810 PPM1GO15355 546 aaPredicted RBP7.74□□□□□ -1.17
TMEM260-212ENST00000556810 GLB1P16278 677 aa7.74□□□□□ -1.17
TMEM260-212ENST00000556810 EPHA1P21709 976 aa7.74□□□□□ -1.17
TMEM260-212ENST00000556810 CES1P23141 567 aa7.74□□□□□ -1.17
TMEM260-212ENST00000556810 CD68P34810 354 aaPredicted RBP7.74□□□□□ -1.17
TMEM260-212ENST00000556810 SLFN5Q08AF3 891 aa7.74□□□□□ -1.17
TMEM260-212ENST00000556810 LRP8Q14114 963 aa7.74□□□□□ -1.17
TMEM260-212ENST00000556810 C8orf34Q49A92 452 aa7.74□□□□□ -1.17
TMEM260-212ENST00000556810 FAM117BQ6P1L5 589 aa7.74□□□□□ -1.17
TMEM260-212ENST00000556810 UNC5CLQ8IV45 518 aa7.74□□□□□ -1.17
TMEM260-212ENST00000556810 TCP11L2Q8N4U5 519 aa7.74□□□□□ -1.17
TMEM260-212ENST00000556810 C1orf127Q8N9H9 656 aa7.74□□□□□ -1.17
TMEM260-212ENST00000556810 PMFBP1Q8TBY8 1022 aa7.74□□□□□ -1.17
TMEM260-212ENST00000556810 POP1Q99575 1024 aaKnown RBP7.74□□□□□ -1.17
TMEM260-212ENST00000556810 CARD10Q9BWT7 1032 aa7.74□□□□□ -1.17
TMEM260-212ENST00000556810 SALL4Q9UJQ4 1053 aa7.74□□□□□ -1.17
TMEM260-212ENST00000556810 IL16Q14005 1332 aa7.74□□□□□ -1.17
TMEM260-212ENST00000556810 ZNF521Q96K83 1311 aa7.74□□□□□ -1.17
TMEM260-212ENST00000556810 PXDNQ92626 1479 aa7.74□□□□□ -1.17
TMEM260-212ENST00000556810 USP54Q70EL1 1684 aa7.73□□□□□ -1.17
TMEM260-212ENST00000556810 A6NHS1 94 aa7.73□□□□□ -1.17
TMEM260-212ENST00000556810 FSCN2O14926 492 aa7.73□□□□□ -1.17
TMEM260-212ENST00000556810 WISP1O95388 367 aa7.73□□□□□ -1.17
TMEM260-212ENST00000556810 MTMR3Q13615 1198 aa7.73□□□□□ -1.17
TMEM260-212ENST00000556810 ALKBH2Q6NS38 261 aa7.73□□□□□ -1.17
TMEM260-212ENST00000556810 DEFB132Q7Z7B7 95 aa7.73□□□□□ -1.17
TMEM260-212ENST00000556810 NME9Q86XW9 330 aa7.73□□□□□ -1.17
TMEM260-212ENST00000556810 CCDC146Q8IYE0 955 aa7.73□□□□□ -1.17
TMEM260-212ENST00000556810 ADAM19Q9H013 955 aa7.73□□□□□ -1.17
TMEM260-212ENST00000556810 SH2B1Q9NRF2 756 aaPredicted RBP7.73□□□□□ -1.17
TMEM260-212ENST00000556810 KCNK4Q9NYG8 393 aa7.73□□□□□ -1.17
TMEM260-212ENST00000556810 CCDC9Q9Y3X0 531 aaKnown RBP7.73□□□□□ -1.17
TMEM260-212ENST00000556810 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.73□□□□□ -1.17
TMEM260-212ENST00000556810 OVOS2A0A0J9YW53 1432 aa7.72□□□□□ -1.17
TMEM260-212ENST00000556810 OVOS2Q6IE36 1432 aa7.72□□□□□ -1.17
TMEM260-212ENST00000556810 SSH2Q76I76 1423 aa7.72□□□□□ -1.17
TMEM260-212ENST00000556810 TM4SF5O14894 197 aa7.72□□□□□ -1.17
TMEM260-212ENST00000556810 ACPPP15309 386 aa7.72□□□□□ -1.17
TMEM260-212ENST00000556810 AMPHP49418 695 aa7.72□□□□□ -1.17
TMEM260-212ENST00000556810 AAMPQ13685 434 aa7.72□□□□□ -1.17
TMEM260-212ENST00000556810 ACAD11Q709F0 780 aa7.72□□□□□ -1.17
TMEM260-212ENST00000556810 TRMT2AQ8IZ69 625 aaKnown RBP7.72□□□□□ -1.17
TMEM260-212ENST00000556810 KLHL23Q8NBE8 558 aa7.72□□□□□ -1.17
TMEM260-212ENST00000556810 SPATA31A3Q5VYP0 1347 aa7.72□□□□□ -1.17
TMEM260-212ENST00000556810 COL3A1P02461 1466 aaPredicted RBP7.71□□□□□ -1.18
TMEM260-212ENST00000556810 TMPOP42166 694 aaKnown RBP7.71□□□□□ -1.18
TMEM260-212ENST00000556810 RRP1P56182 461 aaKnown RBP7.71□□□□□ -1.18
TMEM260-212ENST00000556810 SF3B2Q13435 895 aaKnown RBP7.71□□□□□ -1.18
TMEM260-212ENST00000556810 DUSP27Q5VZP5 1158 aa7.71□□□□□ -1.18
TMEM260-212ENST00000556810 KRT28Q7Z3Y7 464 aa7.71□□□□□ -1.18
TMEM260-212ENST00000556810 NPM2Q86SE8 214 aaKnown RBP7.71□□□□□ -1.18
TMEM260-212ENST00000556810 PMEPA1Q969W9 287 aa7.71□□□□□ -1.18
TMEM260-212ENST00000556810 ZNF428Q96B54 188 aa7.71□□□□□ -1.18
TMEM260-212ENST00000556810 CHRDQ9H2X0 955 aa7.71□□□□□ -1.18
TMEM260-212ENST00000556810 SEC31BQ9NQW1 1179 aa7.71□□□□□ -1.18
TMEM260-212ENST00000556810 RNF112Q9ULX5 631 aa7.71□□□□□ -1.18
TMEM260-212ENST00000556810 POLIQ9UNA4 740 aa7.71□□□□□ -1.18
TMEM260-212ENST00000556810 MTMR7Q9Y216 660 aa7.71□□□□□ -1.18
TMEM260-212ENST00000556810 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.71□□□□□ -1.18
TMEM260-212ENST00000556810 SLIT2O94813 1529 aa7.71□□□□□ -1.18
TMEM260-212ENST00000556810 GLI3P10071 1580 aa7.71□□□□□ -1.18
TMEM260-212ENST00000556810 SBNO1A3KN83 1393 aa7.71□□□□□ -1.18
TMEM260-212ENST00000556810 FLT4P35916 1363 aa7.71□□□□□ -1.18
TMEM260-212ENST00000556810 H3BRJ5 948 aa7.7□□□□□ -1.18
TMEM260-212ENST00000556810 NFKBIEO00221 500 aa7.7□□□□□ -1.18
TMEM260-212ENST00000556810 HYAL3O43820 417 aaPredicted RBP7.7□□□□□ -1.18
TMEM260-212ENST00000556810 NPR3P17342 541 aa7.7□□□□□ -1.18
TMEM260-212ENST00000556810 FSTP19883 344 aa7.7□□□□□ -1.18
TMEM260-212ENST00000556810 IL13P35225 146 aa7.7□□□□□ -1.18
TMEM260-212ENST00000556810 RIPK4P57078 832 aa7.7□□□□□ -1.18
TMEM260-212ENST00000556810 CABP4P57796 275 aa7.7□□□□□ -1.18
TMEM260-212ENST00000556810 NBPF11Q86T75 865 aa7.7□□□□□ -1.18
TMEM260-212ENST00000556810 UBL7Q96S82 380 aaPredicted RBP7.7□□□□□ -1.18
TMEM260-212ENST00000556810 PLEKHF1Q96S99 279 aa7.7□□□□□ -1.18
TMEM260-212ENST00000556810 CEP41Q9BYV8 373 aa7.7□□□□□ -1.18
TMEM260-212ENST00000556810 DZANK1Q9NVP4 752 aa7.7□□□□□ -1.18
TMEM260-212ENST00000556810 FAM13AO94988 1023 aa7.69□□□□□ -1.18
TMEM260-212ENST00000556810 VPS72Q15906 364 aa7.69□□□□□ -1.18
TMEM260-212ENST00000556810 NFE2L2Q16236 605 aa7.69□□□□□ -1.18
TMEM260-212ENST00000556810 DUOXA2Q1HG44 320 aa7.69□□□□□ -1.18
TMEM260-212ENST00000556810 KIAA1211Q6ZU35 1233 aa7.69□□□□□ -1.18
TMEM260-212ENST00000556810 SLC51AQ86UW1 340 aa7.69□□□□□ -1.18
TMEM260-212ENST00000556810 FOXD4L4Q8WXT5 416 aaPredicted RBP7.69□□□□□ -1.18
TMEM260-212ENST00000556810 WNT8BQ93098 351 aa7.69□□□□□ -1.18
TMEM260-212ENST00000556810 KLHDC7BQ96G42 594 aa7.69□□□□□ -1.18
TMEM260-212ENST00000556810 CHMP4AQ9BY43 222 aa7.69□□□□□ -1.18
TMEM260-212ENST00000556810 RAXQ9Y2V3 346 aa7.69□□□□□ -1.18
TMEM260-212ENST00000556810 RTL1A6NKG5 1358 aa7.69□□□□□ -1.18
TMEM260-212ENST00000556810 CARNS1A5YM72 827 aa7.68□□□□□ -1.18
TMEM260-212ENST00000556810 FAM83GA6ND36 823 aa7.68□□□□□ -1.18
TMEM260-212ENST00000556810 PDE2AO00408 941 aaPredicted RBP7.68□□□□□ -1.18
TMEM260-212ENST00000556810 DDX3YO15523 660 aaKnown RBP7.68□□□□□ -1.18
TMEM260-212ENST00000556810 ADAM11O75078 769 aa7.68□□□□□ -1.18
TMEM260-212ENST00000556810 TRPA1O75762 1119 aa7.68□□□□□ -1.18
TMEM260-212ENST00000556810 PRKAR2BP31323 418 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms