RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 PLCD1P51178 756 aa10.69□□□□□ -0.7
SMARCC2-205ENST00000548130 LRRFIP1Q32MZ4 808 aaKnown RBP10.69□□□□□ -0.7
SMARCC2-205ENST00000548130 CCDC84Q86UT8 332 aaPredicted RBP10.69□□□□□ -0.7
SMARCC2-205ENST00000548130 FOXP4Q8IVH2 680 aaPredicted RBP10.69□□□□□ -0.7
SMARCC2-205ENST00000548130 SCYL3Q8IZE3 742 aa10.69□□□□□ -0.7
SMARCC2-205ENST00000548130 CRACR2BQ8N4Y2 399 aaPredicted RBP10.69□□□□□ -0.7
SMARCC2-205ENST00000548130 RILPL2Q969X0 211 aa10.69□□□□□ -0.7
SMARCC2-205ENST00000548130 STRBPQ96SI9 672 aaKnown RBP10.69□□□□□ -0.7
SMARCC2-205ENST00000548130 SEC62Q99442 399 aaKnown RBP10.69□□□□□ -0.7
SMARCC2-205ENST00000548130 TRIM34Q9BYJ4 488 aa10.69□□□□□ -0.7
SMARCC2-205ENST00000548130 OSBPL3Q9H4L5 887 aa10.69□□□□□ -0.7
SMARCC2-205ENST00000548130 PICK1Q9NRD5 415 aa10.69□□□□□ -0.7
SMARCC2-205ENST00000548130 RNF186Q9NXI6 227 aa10.69□□□□□ -0.7
SMARCC2-205ENST00000548130 IRF6O14896 467 aa10.68□□□□□ -0.7
SMARCC2-205ENST00000548130 CTNND1O60716 968 aaKnown RBP10.68□□□□□ -0.7
SMARCC2-205ENST00000548130 TRPA1O75762 1119 aa10.68□□□□□ -0.7
SMARCC2-205ENST00000548130 HSPA8P11142 646 aaKnown RBP10.68□□□□□ -0.7
SMARCC2-205ENST00000548130 TM4SF4P48230 202 aa10.68□□□□□ -0.7
SMARCC2-205ENST00000548130 CTCFP49711 727 aaPredicted RBP10.68□□□□□ -0.7
SMARCC2-205ENST00000548130 SREBF2Q12772 1141 aa10.68□□□□□ -0.7
SMARCC2-205ENST00000548130 PPIL2Q13356 520 aa10.68□□□□□ -0.7
SMARCC2-205ENST00000548130 SHROOM1Q2M3G4 852 aaPredicted RBP10.68□□□□□ -0.7
SMARCC2-205ENST00000548130 ZMYM1Q5SVZ6 1142 aa10.68□□□□□ -0.7
SMARCC2-205ENST00000548130 CCDC129Q6ZRS4 1044 aa10.68□□□□□ -0.7
SMARCC2-205ENST00000548130 TTC6Q86TZ1 520 aa10.68□□□□□ -0.7
SMARCC2-205ENST00000548130 PDCD7Q8N8D1 485 aaKnown RBP10.68□□□□□ -0.7
SMARCC2-205ENST00000548130 HERC5Q9UII4 1024 aaKnown RBP10.68□□□□□ -0.7
SMARCC2-205ENST00000548130 THSD7BQ9C0I4 1608 aa10.68□□□□□ -0.7
SMARCC2-205ENST00000548130 CYP2D7A0A087X1C5 515 aa10.67□□□□□ -0.7
SMARCC2-205ENST00000548130 CCL15-CCL14A0A0B4J2E2 113 aa10.67□□□□□ -0.7
SMARCC2-205ENST00000548130 SMIM22K7EJ46 135 aa10.67□□□□□ -0.7
SMARCC2-205ENST00000548130 IGF2BP3O00425 579 aaKnown RBP eCLIP10.67□□□□□ -0.7
SMARCC2-205ENST00000548130 GDF11O95390 407 aa10.67□□□□□ -0.7
SMARCC2-205ENST00000548130 PTPRAP18433 802 aa10.67□□□□□ -0.7
SMARCC2-205ENST00000548130 CAP2P40123 477 aa10.67□□□□□ -0.7
SMARCC2-205ENST00000548130 LBX1P52954 281 aa10.67□□□□□ -0.7
SMARCC2-205ENST00000548130 PPATQ06203 517 aa10.67□□□□□ -0.7
SMARCC2-205ENST00000548130 CCL15Q16663 113 aa10.67□□□□□ -0.7
SMARCC2-205ENST00000548130 METTL16Q86W50 562 aaKnown RBP10.67□□□□□ -0.7
SMARCC2-205ENST00000548130 SKAP1Q86WV1 359 aa10.67□□□□□ -0.7
SMARCC2-205ENST00000548130 BRI3BPQ8WY22 251 aa10.67□□□□□ -0.7
SMARCC2-205ENST00000548130 MS4A4AQ96JQ5 239 aa10.67□□□□□ -0.7
SMARCC2-205ENST00000548130 ATP8A2Q9NTI2 1148 aa10.67□□□□□ -0.7
SMARCC2-205ENST00000548130 SERPINB13Q9UIV8 391 aa10.67□□□□□ -0.7
SMARCC2-205ENST00000548130 ZHX2Q9Y6X8 837 aa10.67□□□□□ -0.7
SMARCC2-205ENST00000548130 PCNTO95613 3336 aa10.67□□□□□ -0.7
SMARCC2-205ENST00000548130 OTOFQ9HC10 1997 aa10.66□□□□□ -0.7
SMARCC2-205ENST00000548130 GSG1L2A8MUP6 293 aa10.66□□□□□ -0.7
SMARCC2-205ENST00000548130 USP17L12C9JPN9 530 aa10.66□□□□□ -0.7
SMARCC2-205ENST00000548130 USP17L21D6R901 530 aa10.66□□□□□ -0.7
SMARCC2-205ENST00000548130 CA12O43570 354 aa10.66□□□□□ -0.7
SMARCC2-205ENST00000548130 APPP05067 770 aa10.66□□□□□ -0.7
SMARCC2-205ENST00000548130 GTF2A2P52657 109 aa10.66□□□□□ -0.7
SMARCC2-205ENST00000548130 JAG1P78504 1218 aa10.66□□□□□ -0.7
SMARCC2-205ENST00000548130 SNAPC2Q13487 334 aa10.66□□□□□ -0.7
SMARCC2-205ENST00000548130 TTC22Q5TAA0 569 aa10.66□□□□□ -0.7
SMARCC2-205ENST00000548130 CENPQQ7L2Z9 268 aaPredicted RBP10.66□□□□□ -0.7
SMARCC2-205ENST00000548130 SLC44A5Q8NCS7 719 aa10.66□□□□□ -0.7
SMARCC2-205ENST00000548130 RNF25Q96BH1 459 aaPredicted RBP10.66□□□□□ -0.7
SMARCC2-205ENST00000548130 DYNLL2Q96FJ2 89 aa10.66□□□□□ -0.7
SMARCC2-205ENST00000548130 DDRGK1Q96HY6 314 aa10.66□□□□□ -0.7
SMARCC2-205ENST00000548130 FAM227BQ96M60 508 aa10.66□□□□□ -0.7
SMARCC2-205ENST00000548130 PTPN18Q99952 460 aa10.66□□□□□ -0.7
SMARCC2-205ENST00000548130 EHD4Q9H223 541 aa10.66□□□□□ -0.7
SMARCC2-205ENST00000548130 EPB41L4AQ9HCS5 686 aaPredicted RBP10.66□□□□□ -0.7
SMARCC2-205ENST00000548130 A0A0D9SFI3 127 aa10.65□□□□□ -0.7
SMARCC2-205ENST00000548130 TESPA1A2RU30 521 aaPredicted RBP10.65□□□□□ -0.7
SMARCC2-205ENST00000548130 TRIM75PA6NK02 468 aa10.65□□□□□ -0.7
SMARCC2-205ENST00000548130 TBC1D8O95759 1140 aa10.65□□□□□ -0.7
SMARCC2-205ENST00000548130 CETPP11597 493 aa10.65□□□□□ -0.7
SMARCC2-205ENST00000548130 GSPT1P15170 499 aaKnown RBP10.65□□□□□ -0.7
SMARCC2-205ENST00000548130 SDSP20132 328 aa10.65□□□□□ -0.7
SMARCC2-205ENST00000548130 SHMT1P34896 483 aa10.65□□□□□ -0.7
SMARCC2-205ENST00000548130 INHBEP58166 350 aa10.65□□□□□ -0.7
SMARCC2-205ENST00000548130 GABPAQ06546 454 aa10.65□□□□□ -0.7
SMARCC2-205ENST00000548130 NMIQ13287 307 aaPredicted RBP10.65□□□□□ -0.7
SMARCC2-205ENST00000548130 C12orf60Q5U649 245 aa10.65□□□□□ -0.7
SMARCC2-205ENST00000548130 CTR9Q6PD62 1173 aa10.65□□□□□ -0.7
SMARCC2-205ENST00000548130 STK11IPQ8N1F8 1099 aa10.65□□□□□ -0.7
SMARCC2-205ENST00000548130 SLAIN1Q8ND83 568 aa10.65□□□□□ -0.7
SMARCC2-205ENST00000548130 CCDC136Q96JN2 1154 aa10.65□□□□□ -0.7
SMARCC2-205ENST00000548130 R3HDMLQ9H3Y0 253 aa10.65□□□□□ -0.7
SMARCC2-205ENST00000548130 SAGE1Q9NXZ1 904 aa10.65□□□□□ -0.7
SMARCC2-205ENST00000548130 KCNH4Q9UQ05 1017 aa10.65□□□□□ -0.7
SMARCC2-205ENST00000548130 AFG3L2Q9Y4W6 797 aa10.65□□□□□ -0.7
SMARCC2-205ENST00000548130 USP17L5A8MUK1 530 aa10.64□□□□□ -0.71
SMARCC2-205ENST00000548130 MINDY4BA8MYZ0 360 aa10.64□□□□□ -0.71
SMARCC2-205ENST00000548130 PATL2C9JE40 543 aaKnown RBP10.64□□□□□ -0.71
SMARCC2-205ENST00000548130 BTBD19C9JJ37 291 aa10.64□□□□□ -0.71
SMARCC2-205ENST00000548130 CXCL11O14625 94 aa10.64□□□□□ -0.71
SMARCC2-205ENST00000548130 ECM2O94769 699 aaPredicted RBP10.64□□□□□ -0.71
SMARCC2-205ENST00000548130 GH2P01242 217 aa10.64□□□□□ -0.71
SMARCC2-205ENST00000548130 GNAT2P19087 354 aa10.64□□□□□ -0.71
SMARCC2-205ENST00000548130 TDO2P48775 406 aa10.64□□□□□ -0.71
SMARCC2-205ENST00000548130 CERKLQ49MI3 558 aaPredicted RBP10.64□□□□□ -0.71
SMARCC2-205ENST00000548130 TATDN1Q6P1N9 297 aa10.64□□□□□ -0.71
SMARCC2-205ENST00000548130 AMOTL1Q8IY63 956 aa10.64□□□□□ -0.71
SMARCC2-205ENST00000548130 IFNL3Q8IZI9 196 aa10.64□□□□□ -0.71
SMARCC2-205ENST00000548130 FAM43AQ8N2R8 423 aa10.64□□□□□ -0.71
SMARCC2-205ENST00000548130 HELLSQ9NRZ9 838 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms