RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 A0A1W2PQD8 194 aa21.66■■□□□ 1.06
SUDS3-204ENST00000543473 GIGYF1O75420 1035 aaPredicted RBP21.66■■□□□ 1.06
SUDS3-204ENST00000543473 LRRC45Q96CN5 670 aa21.66■■□□□ 1.06
SUDS3-204ENST00000543473 DDX41Q9UJV9 622 aaKnown RBP21.66■■□□□ 1.06
SUDS3-204ENST00000543473 KCNJ14Q9UNX9 436 aa21.66■■□□□ 1.06
SUDS3-204ENST00000543473 A0A087WWV3 80 aa21.66■■□□□ 1.06
SUDS3-204ENST00000543473 CLNS1AP54105 237 aaKnown RBP21.66■■□□□ 1.06
SUDS3-204ENST00000543473 LACTBP83111 547 aaPredicted RBP21.66■■□□□ 1.06
SUDS3-204ENST00000543473 GCKRQ14397 625 aa21.66■■□□□ 1.06
SUDS3-204ENST00000543473 DPCR1Q3MIW9 517 aa21.66■■□□□ 1.06
SUDS3-204ENST00000543473 RUFY4Q6ZNE9 571 aa21.66■■□□□ 1.06
SUDS3-204ENST00000543473 RRP15Q9Y3B9 282 aaKnown RBP21.66■■□□□ 1.06
SUDS3-204ENST00000543473 V9GY48 417 aaPredicted RBP21.66■■□□□ 1.06
SUDS3-204ENST00000543473 RAPGEF1Q13905 1077 aa21.66■■□□□ 1.06
SUDS3-204ENST00000543473 BCAS4Q8TDM0 211 aa21.66■■□□□ 1.06
SUDS3-204ENST00000543473 SEC62Q99442 399 aaKnown RBP21.66■■□□□ 1.06
SUDS3-204ENST00000543473 GNGT1P63211 74 aa21.65■■□□□ 1.06
SUDS3-204ENST00000543473 CCDC25Q86WR0 208 aa21.65■■□□□ 1.06
SUDS3-204ENST00000543473 KCNK9Q9NPC2 374 aa21.65■■□□□ 1.06
SUDS3-204ENST00000543473 CLTCL1P53675 1640 aa21.65■■□□□ 1.06
SUDS3-204ENST00000543473 SH3TC1Q8TE82 1336 aa21.65■■□□□ 1.06
SUDS3-204ENST00000543473 TTC38Q5R3I4 469 aa21.65■■□□□ 1.06
SUDS3-204ENST00000543473 SRGAP1Q7Z6B7 1085 aa21.65■■□□□ 1.06
SUDS3-204ENST00000543473 CDC23Q9UJX2 597 aa21.65■■□□□ 1.06
SUDS3-204ENST00000543473 ACTN2P35609 894 aa21.64■■□□□ 1.06
SUDS3-204ENST00000543473 LIG3P49916 1009 aa21.64■■□□□ 1.06
SUDS3-204ENST00000543473 SCRN1Q12765 414 aa21.64■■□□□ 1.06
SUDS3-204ENST00000543473 ZNF827Q17R98 1081 aa21.64■■□□□ 1.06
SUDS3-204ENST00000543473 PIK3AP1Q6ZUJ8 805 aa21.64■■□□□ 1.06
SUDS3-204ENST00000543473 OR8K1Q8NGG5 319 aa21.64■■□□□ 1.06
SUDS3-204ENST00000543473 CCNL1Q9UK58 526 aaPredicted RBP21.64■■□□□ 1.06
SUDS3-204ENST00000543473 IKBKGQ9Y6K9 419 aa21.64■■□□□ 1.06
SUDS3-204ENST00000543473 TRAF5O00463 557 aa21.64■■□□□ 1.06
SUDS3-204ENST00000543473 CAPN7Q9Y6W3 813 aa21.64■■□□□ 1.06
SUDS3-204ENST00000543473 A2ML1A8K2U0 1454 aa21.64■■□□□ 1.05
SUDS3-204ENST00000543473 XAGE2Q96GT9 111 aa21.64■■□□□ 1.05
SUDS3-204ENST00000543473 PHLPP2Q6ZVD8 1323 aa21.64■■□□□ 1.05
SUDS3-204ENST00000543473 CCDC50Q8IVM0 306 aa21.64■■□□□ 1.05
SUDS3-204ENST00000543473 HOMER2Q9NSB8 354 aa21.64■■□□□ 1.05
SUDS3-204ENST00000543473 SWAP70Q9UH65 585 aa21.64■■□□□ 1.05
SUDS3-204ENST00000543473 CLASP1Q7Z460 1538 aa21.64■■□□□ 1.05
SUDS3-204ENST00000543473 LARGE1O95461 756 aa21.63■■□□□ 1.05
SUDS3-204ENST00000543473 PPARDQ03181 441 aa21.63■■□□□ 1.05
SUDS3-204ENST00000543473 NELFBQ8WX92 580 aa21.63■■□□□ 1.05
SUDS3-204ENST00000543473 RTEL1Q9NZ71 1219 aa21.63■■□□□ 1.05
SUDS3-204ENST00000543473 CLIC4Q9Y696 253 aa21.63■■□□□ 1.05
SUDS3-204ENST00000543473 CDC42BPBQ9Y5S2 1711 aa21.63■■□□□ 1.05
SUDS3-204ENST00000543473 ERVV-2B6SEH9 535 aa21.63■■□□□ 1.05
SUDS3-204ENST00000543473 ZBTB16Q05516 673 aa21.63■■□□□ 1.05
SUDS3-204ENST00000543473 CFAP221Q4G0U5 840 aa21.63■■□□□ 1.05
SUDS3-204ENST00000543473 TRMT1LQ7Z2T5 733 aaKnown RBP21.63■■□□□ 1.05
SUDS3-204ENST00000543473 FERMT2Q96AC1 680 aa21.63■■□□□ 1.05
SUDS3-204ENST00000543473 HNRNPH2P55795 449 aaKnown RBP21.62■■□□□ 1.05
SUDS3-204ENST00000543473 SETDB1Q15047 1291 aa21.62■■□□□ 1.05
SUDS3-204ENST00000543473 SV2BQ7L1I2 683 aa21.62■■□□□ 1.05
SUDS3-204ENST00000543473 ZNF594Q96JF6 807 aaPredicted RBP21.62■■□□□ 1.05
SUDS3-204ENST00000543473 RCOR1Q9UKL0 485 aa21.62■■□□□ 1.05
SUDS3-204ENST00000543473 IGSF1Q8N6C5 1336 aa21.62■■□□□ 1.05
SUDS3-204ENST00000543473 GNA11P29992 359 aa21.62■■□□□ 1.05
SUDS3-204ENST00000543473 PNMA8AQ86V59 439 aaPredicted RBP21.62■■□□□ 1.05
SUDS3-204ENST00000543473 ZDHHC9Q9Y397 364 aa21.62■■□□□ 1.05
SUDS3-204ENST00000543473 E7EVH7 732 aa21.62■■□□□ 1.05
SUDS3-204ENST00000543473 PNMA6AP0CW24 399 aaPredicted RBP21.62■■□□□ 1.05
SUDS3-204ENST00000543473 ITGA6P23229 1130 aa21.62■■□□□ 1.05
SUDS3-204ENST00000543473 CALCOCO2Q13137 446 aa21.62■■□□□ 1.05
SUDS3-204ENST00000543473 FBXO18Q8NFZ0 1043 aa21.62■■□□□ 1.05
SUDS3-204ENST00000543473 TAF5LO75529 589 aa21.62■■□□□ 1.05
SUDS3-204ENST00000543473 MAP3K9P80192 1104 aa21.62■■□□□ 1.05
SUDS3-204ENST00000543473 TRAPPC3LQ5T215 181 aa21.62■■□□□ 1.05
SUDS3-204ENST00000543473 BEND3Q5T5X7 828 aa21.61■■□□□ 1.05
SUDS3-204ENST00000543473 IFT74Q96LB3 600 aa21.61■■□□□ 1.05
SUDS3-204ENST00000543473 PCDHA5Q9Y5H7 936 aa21.61■■□□□ 1.05
SUDS3-204ENST00000543473 TMEM110-MUSTN1A8MSY1 372 aa21.61■■□□□ 1.05
SUDS3-204ENST00000543473 MYCBPQ99417 103 aaPredicted RBP21.61■■□□□ 1.05
SUDS3-204ENST00000543473 CAPS2Q9BXY5 557 aa21.61■■□□□ 1.05
SUDS3-204ENST00000543473 CCDC151A5D8V7 595 aa21.61■■□□□ 1.05
SUDS3-204ENST00000543473 FAM204AQ9H8W3 233 aa21.61■■□□□ 1.05
SUDS3-204ENST00000543473 F8W031 263 aaPredicted RBP21.61■■□□□ 1.05
SUDS3-204ENST00000543473 CNNM4Q6P4Q7 775 aa21.61■■□□□ 1.05
SUDS3-204ENST00000543473 KLHL7Q8IXQ5 586 aa21.61■■□□□ 1.05
SUDS3-204ENST00000543473 TRIML1Q8N9V2 468 aa21.61■■□□□ 1.05
SUDS3-204ENST00000543473 HAUS4Q9H6D7 363 aa21.61■■□□□ 1.05
SUDS3-204ENST00000543473 UNC13BO14795 1591 aa21.6■■□□□ 1.05
SUDS3-204ENST00000543473 LETM2Q2VYF4 491 aa21.6■■□□□ 1.05
SUDS3-204ENST00000543473 PARP10Q53GL7 1025 aa21.6■■□□□ 1.05
SUDS3-204ENST00000543473 EXOC4Q96A65 974 aa21.6■■□□□ 1.05
SUDS3-204ENST00000543473 BLZF1Q9H2G9 400 aa21.6■■□□□ 1.05
SUDS3-204ENST00000543473 IKBKBO14920 756 aa21.6■■□□□ 1.05
SUDS3-204ENST00000543473 BUB1BO60566 1050 aaPredicted RBP21.6■■□□□ 1.05
SUDS3-204ENST00000543473 PDIA3P30101 505 aaKnown RBP21.6■■□□□ 1.05
SUDS3-204ENST00000543473 ADD1P35611 737 aaKnown RBP21.6■■□□□ 1.05
SUDS3-204ENST00000543473 GSTO1P78417 241 aa21.6■■□□□ 1.05
SUDS3-204ENST00000543473 SLC9C1Q4G0N8 1177 aa21.6■■□□□ 1.05
SUDS3-204ENST00000543473 IFIH1Q9BYX4 1025 aaKnown RBP21.6■■□□□ 1.05
SUDS3-204ENST00000543473 ZNF853P0CG23 659 aa21.6■■□□□ 1.05
SUDS3-204ENST00000543473 GOLGA8FQ08AF8 430 aa21.6■■□□□ 1.05
SUDS3-204ENST00000543473 GOLGA8DPQ0D2H9 430 aa21.6■■□□□ 1.05
SUDS3-204ENST00000543473 MAP3K4Q9Y6R4 1608 aa21.6■■□□□ 1.05
SUDS3-204ENST00000543473 TNNI2P48788 182 aa21.6■■□□□ 1.05
SUDS3-204ENST00000543473 CLIC6Q96NY7 704 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms