RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 PRDM10Q9NQV6 1147 aa5.23□□□□□ -1.57
USP28-210ENST00000542033 KCNQ5Q9NR82 932 aa5.23□□□□□ -1.57
USP28-210ENST00000542033 ANGEL1Q9UNK9 670 aaKnown RBP5.23□□□□□ -1.57
USP28-210ENST00000542033 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.23□□□□□ -1.57
USP28-210ENST00000542033 ROBO2Q9HCK4 1378 aa5.23□□□□□ -1.57
USP28-210ENST00000542033 GFRA2O00451 464 aa5.22□□□□□ -1.57
USP28-210ENST00000542033 GREM1O60565 184 aa5.22□□□□□ -1.57
USP28-210ENST00000542033 WNT11O96014 354 aa5.22□□□□□ -1.57
USP28-210ENST00000542033 PGRP06401 933 aa5.22□□□□□ -1.57
USP28-210ENST00000542033 HOXA10P31260 410 aaPredicted RBP5.22□□□□□ -1.57
USP28-210ENST00000542033 RACK1P63244 317 aaKnown RBP5.22□□□□□ -1.57
USP28-210ENST00000542033 MSMPQ1L6U9 139 aa5.22□□□□□ -1.57
USP28-210ENST00000542033 ZNF746Q6NUN9 644 aaPredicted RBP5.22□□□□□ -1.57
USP28-210ENST00000542033 ARMCX6Q7L4S7 300 aa5.22□□□□□ -1.57
USP28-210ENST00000542033 VSIG10LQ86VR7 867 aa5.22□□□□□ -1.57
USP28-210ENST00000542033 MFSD2AQ8NA29 543 aa5.22□□□□□ -1.57
USP28-210ENST00000542033 FBXO27Q8NI29 283 aa5.22□□□□□ -1.57
USP28-210ENST00000542033 FOXQ1Q9C009 403 aa5.22□□□□□ -1.57
USP28-210ENST00000542033 TGIF2Q9GZN2 237 aa5.22□□□□□ -1.57
USP28-210ENST00000542033 MKNK2Q9HBH9 465 aa5.22□□□□□ -1.57
USP28-210ENST00000542033 BSDC1Q9NW68 430 aaPredicted RBP5.22□□□□□ -1.57
USP28-210ENST00000542033 UBP1Q9NZI7 540 aa5.22□□□□□ -1.57
USP28-210ENST00000542033 ADAM30Q9UKF2 790 aa5.22□□□□□ -1.57
USP28-210ENST00000542033 LEFTY1O75610 366 aa5.21□□□□□ -1.58
USP28-210ENST00000542033 MED26O95402 600 aa5.21□□□□□ -1.58
USP28-210ENST00000542033 MCM4P33991 863 aa5.21□□□□□ -1.58
USP28-210ENST00000542033 SEZ6Q53EL9 994 aa5.21□□□□□ -1.58
USP28-210ENST00000542033 REC114Q7Z4M0 266 aa5.21□□□□□ -1.58
USP28-210ENST00000542033 STK11IPQ8N1F8 1099 aa5.21□□□□□ -1.58
USP28-210ENST00000542033 NKD1Q969G9 470 aa5.21□□□□□ -1.58
USP28-210ENST00000542033 NT5C1AQ9BXI3 368 aa5.21□□□□□ -1.58
USP28-210ENST00000542033 KRTAP4-8A0A0G2JLE6 195 aa5.2□□□□□ -1.58
USP28-210ENST00000542033 IGF2BP3O00425 579 aaKnown RBP eCLIP5.2□□□□□ -1.58
USP28-210ENST00000542033 GRIN3BO60391 1043 aa5.2□□□□□ -1.58
USP28-210ENST00000542033 PRNPP04156 253 aa5.2□□□□□ -1.58
USP28-210ENST00000542033 PLCG1P19174 1290 aa5.2□□□□□ -1.58
USP28-210ENST00000542033 MLECQ14165 292 aa5.2□□□□□ -1.58
USP28-210ENST00000542033 SLBPQ14493 270 aaKnown RBP eCLIP5.2□□□□□ -1.58
USP28-210ENST00000542033 SLC6A19Q695T7 634 aa5.2□□□□□ -1.58
USP28-210ENST00000542033 UBE3DQ7Z6J8 389 aa5.2□□□□□ -1.58
USP28-210ENST00000542033 MRPL41Q8IXM3 137 aaKnown RBP5.2□□□□□ -1.58
USP28-210ENST00000542033 NETO1Q8TDF5 533 aa5.2□□□□□ -1.58
USP28-210ENST00000542033 MISP3Q96FF7 219 aa5.2□□□□□ -1.58
USP28-210ENST00000542033 EAF1Q96JC9 268 aaPredicted RBP5.2□□□□□ -1.58
USP28-210ENST00000542033 FBXL18Q96ME1 805 aa5.2□□□□□ -1.58
USP28-210ENST00000542033 MIPEPQ99797 713 aa5.2□□□□□ -1.58
USP28-210ENST00000542033 LRRC3Q9BY71 257 aa5.2□□□□□ -1.58
USP28-210ENST00000542033 FBRSQ9HAH7 460 aa5.2□□□□□ -1.58
USP28-210ENST00000542033 BRMS1Q9HCU9 246 aa5.2□□□□□ -1.58
USP28-210ENST00000542033 PRDM5Q9NQX1 630 aaPredicted RBP5.2□□□□□ -1.58
USP28-210ENST00000542033 ZC3H7BQ9UGR2 993 aaKnown RBP5.2□□□□□ -1.58
USP28-210ENST00000542033 INPP5FQ9Y2H2 1132 aa5.2□□□□□ -1.58
USP28-210ENST00000542033 GNAT3A8MTJ3 354 aa5.19□□□□□ -1.58
USP28-210ENST00000542033 CST3P01034 146 aaPredicted RBP5.19□□□□□ -1.58
USP28-210ENST00000542033 CYP7A1P22680 504 aa5.19□□□□□ -1.58
USP28-210ENST00000542033 CRKP46108 304 aa5.19□□□□□ -1.58
USP28-210ENST00000542033 ZNF165P49910 485 aa5.19□□□□□ -1.58
USP28-210ENST00000542033 YARSP54577 528 aaKnown RBP5.19□□□□□ -1.58
USP28-210ENST00000542033 RAD51AP2Q09MP3 1159 aa5.19□□□□□ -1.58
USP28-210ENST00000542033 PAK2Q13177 524 aa5.19□□□□□ -1.58
USP28-210ENST00000542033 IFI16Q16666 785 aaKnown RBP5.19□□□□□ -1.58
USP28-210ENST00000542033 GPRASP2Q96D09 838 aa5.19□□□□□ -1.58
USP28-210ENST00000542033 TMEM87BQ96K49 555 aa5.19□□□□□ -1.58
USP28-210ENST00000542033 COX4I2Q96KJ9 171 aa5.19□□□□□ -1.58
USP28-210ENST00000542033 SPATA32Q96LK8 384 aa5.19□□□□□ -1.58
USP28-210ENST00000542033 ACBD3Q9H3P7 528 aa5.19□□□□□ -1.58
USP28-210ENST00000542033 CCDC39Q9UFE4 941 aa5.19□□□□□ -1.58
USP28-210ENST00000542033 TPX2Q9ULW0 747 aaKnown RBP5.19□□□□□ -1.58
USP28-210ENST00000542033 MAPK8IP1Q9UQF2 711 aa5.19□□□□□ -1.58
USP28-210ENST00000542033 CORINQ9Y5Q5 1042 aa5.19□□□□□ -1.58
USP28-210ENST00000542033 TMEM265A0A087WTH1 108 aa5.18□□□□□ -1.58
USP28-210ENST00000542033 HTR3BO95264 441 aa5.18□□□□□ -1.58
USP28-210ENST00000542033 CEACAM5P06731 702 aa5.18□□□□□ -1.58
USP28-210ENST00000542033 GP2P55259 537 aaKnown RBP5.18□□□□□ -1.58
USP28-210ENST00000542033 GNL2Q13823 731 aaKnown RBP5.18□□□□□ -1.58
USP28-210ENST00000542033 NKG7Q16617 165 aa5.18□□□□□ -1.58
USP28-210ENST00000542033 PRAMEF13Q5VWM6 474 aa5.18□□□□□ -1.58
USP28-210ENST00000542033 LETMD1Q6P1Q0 360 aa5.18□□□□□ -1.58
USP28-210ENST00000542033 GK5Q6ZS86 529 aa5.18□□□□□ -1.58
USP28-210ENST00000542033 MCATQ8IVS2 390 aaKnown RBP5.18□□□□□ -1.58
USP28-210ENST00000542033 SLITRK4Q8IW52 837 aa5.18□□□□□ -1.58
USP28-210ENST00000542033 FAM181AQ8N9Y4 354 aa5.18□□□□□ -1.58
USP28-210ENST00000542033 AGBL5Q8NDL9 886 aa5.18□□□□□ -1.58
USP28-210ENST00000542033 TJP2Q9UDY2 1190 aa5.18□□□□□ -1.58
USP28-210ENST00000542033 SLC5A6Q9Y289 635 aa5.18□□□□□ -1.58
USP28-210ENST00000542033 POLR3KQ9Y2Y1 108 aaPredicted RBP5.18□□□□□ -1.58
USP28-210ENST00000542033 PCDHB14Q9Y5E9 798 aa5.18□□□□□ -1.58
USP28-210ENST00000542033 SLITRK5O94991 958 aa5.17□□□□□ -1.58
USP28-210ENST00000542033 EOMESO95936 686 aa5.17□□□□□ -1.58
USP28-210ENST00000542033 ITIH2P19823 946 aa5.17□□□□□ -1.58
USP28-210ENST00000542033 OXCT1P55809 520 aa5.17□□□□□ -1.58
USP28-210ENST00000542033 TMEM201Q5SNT2 666 aa5.17□□□□□ -1.58
USP28-210ENST00000542033 SFRP5Q5T4F7 317 aa5.17□□□□□ -1.58
USP28-210ENST00000542033 REXO1Q8N1G1 1221 aaKnown RBP5.17□□□□□ -1.58
USP28-210ENST00000542033 PLD6Q8N2A8 252 aaKnown RBP5.17□□□□□ -1.58
USP28-210ENST00000542033 FAM13CQ8NE31 585 aa5.17□□□□□ -1.58
USP28-210ENST00000542033 FLCNQ8NFG4 579 aa5.17□□□□□ -1.58
USP28-210ENST00000542033 HRASLS5Q96KN8 279 aa5.17□□□□□ -1.58
USP28-210ENST00000542033 CAPN10Q9HC96 672 aa5.17□□□□□ -1.58
USP28-210ENST00000542033 IGSF5Q9NSI5 407 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms