RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 YOD1Q5VVQ6 348 aaPredicted RBP4.71□□□□□ -1.66
AMBRA1-208ENST00000529558 CNNM4Q6P4Q7 775 aa4.71□□□□□ -1.66
AMBRA1-208ENST00000529558 CYFIP1Q7L576 1253 aa4.71□□□□□ -1.66
AMBRA1-208ENST00000529558 SYT9Q86SS6 491 aa4.71□□□□□ -1.66
AMBRA1-208ENST00000529558 RIN3Q8TB24 985 aa4.71□□□□□ -1.66
AMBRA1-208ENST00000529558 ACSBG1Q96GR2 724 aa4.71□□□□□ -1.66
AMBRA1-208ENST00000529558 LACRTQ9GZZ8 138 aa4.71□□□□□ -1.66
AMBRA1-208ENST00000529558 PRDM16Q9HAZ2 1276 aa4.71□□□□□ -1.66
AMBRA1-208ENST00000529558 KRT82Q9NSB4 513 aa4.71□□□□□ -1.66
AMBRA1-208ENST00000529558 DACH1Q9UI36 760 aa4.71□□□□□ -1.66
AMBRA1-208ENST00000529558 ADAM30Q9UKF2 790 aa4.71□□□□□ -1.66
AMBRA1-208ENST00000529558 TRIM33Q9UPN9 1127 aa4.71□□□□□ -1.66
AMBRA1-208ENST00000529558 SHTN1A0MZ66 631 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 ANKRD34BA5PLL1 514 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 FAM83GA6ND36 823 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 FAM86C2PA6NEL3 165 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 CHURC1-FNTBB4DL54 471 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 MAN1A2O60476 641 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 EIF4EBP3O60516 100 aaPredicted RBP4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 NPTXRO95502 500 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 CAPNS1P04632 268 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 CYP11A1P05108 521 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 CDC27P30260 824 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 RAB27AP51159 221 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 CABP4P57796 275 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 CTBSQ01459 385 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 GSTM4Q03013 218 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 PTSQ03393 145 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 TBC1D8BQ0IIM8 1120 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 MAP7Q14244 749 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 HLTFQ14527 1009 aaKnown RBP eCLIP4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 BBS9Q3SYG4 887 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 ELMSAN1Q6PJG2 1045 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 NECAB2Q7Z6G3 386 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 AHI1Q8N157 1196 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 CACTIN-AS1Q8N1I8 211 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 PPM1KQ8N3J5 372 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 AARSD1Q9BTE6 412 aaKnown RBP4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 SMG9Q9H0W8 520 aaKnown RBP4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 CCDC86Q9H6F5 360 aaKnown RBP4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 SLC5A4Q9NY91 659 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 FRRS1LQ9P0K9 344 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 SUSD2Q9UGT4 822 aa4.7□□□□□ -1.66
AMBRA1-208ENST00000529558 H3BRJ5 948 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 AKAP10O43572 662 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 CREB3O43889 395 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 ZNF862O60290 1169 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 DNAJC8O75937 253 aaPredicted RBP4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 ECEL1O95672 775 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 SCGB1D2O95969 90 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 KRT18P05783 430 aaKnown RBP4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 NAT2P11245 290 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 FGFR1P11362 822 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 POU3F2P20265 443 aaPredicted RBP4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 EPHA1P21709 976 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 SMCPP49901 116 aaPredicted RBP4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 NEK2P51955 445 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 PMS1P54277 932 aaKnown RBP4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 PPP2R2AP63151 447 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 MTMR1Q13613 665 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 TRIM61Q5EBN2 209 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 ZNF468Q5VIY5 522 aaPredicted RBP4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 RNF219Q5W0B1 726 aaPredicted RBP4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 TSHZ1Q6ZSZ6 1077 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 C14orf80Q86SX3 495 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 CHPFQ8IZ52 775 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 MYO1HQ8N1T3 1032 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 WDR66Q8TBY9 1149 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 LEO1Q8WVC0 666 aaPredicted RBP4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 TTC9Q92623 222 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 TNFRSF25Q93038 417 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 GTPBP3Q969Y2 492 aaKnown RBP4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 ELMO3Q96BJ8 720 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 SLC39A13Q96H72 371 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 DHRS1Q96LJ7 313 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 LPIN3Q9BQK8 851 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 CORO1BQ9BR76 489 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 NRSN2Q9GZP1 204 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 ARNT2Q9HBZ2 717 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 ZIM2Q9NZV7 527 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 KLHL3Q9UH77 587 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 SLC6A14Q9UN76 642 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 PHF24Q9UPV7 400 aa4.69□□□□□ -1.66
AMBRA1-208ENST00000529558 DCDC2CA8MYV0 355 aa4.68□□□□□ -1.66
AMBRA1-208ENST00000529558 PLIN1O60240 522 aa4.68□□□□□ -1.66
AMBRA1-208ENST00000529558 PGRP06401 933 aa4.68□□□□□ -1.66
AMBRA1-208ENST00000529558 RAG1P15918 1043 aa4.68□□□□□ -1.66
AMBRA1-208ENST00000529558 POLR2BP30876 1174 aaKnown RBP4.68□□□□□ -1.66
AMBRA1-208ENST00000529558 GRK4P32298 578 aa4.68□□□□□ -1.66
AMBRA1-208ENST00000529558 SUMO1P63165 101 aaKnown RBP4.68□□□□□ -1.66
AMBRA1-208ENST00000529558 STRN3Q13033 797 aa4.68□□□□□ -1.66
AMBRA1-208ENST00000529558 POU4F3Q15319 338 aa4.68□□□□□ -1.66
AMBRA1-208ENST00000529558 DHCR24Q15392 516 aa4.68□□□□□ -1.66
AMBRA1-208ENST00000529558 LHFPL2Q6ZUX7 228 aa4.68□□□□□ -1.66
AMBRA1-208ENST00000529558 TMEM192Q8IY95 271 aa4.68□□□□□ -1.66
AMBRA1-208ENST00000529558 CCDC155Q8N6L0 562 aa4.68□□□□□ -1.66
AMBRA1-208ENST00000529558 TTC8Q8TAM2 541 aa4.68□□□□□ -1.66
AMBRA1-208ENST00000529558 ACSF2Q96CM8 615 aaPredicted RBP4.68□□□□□ -1.66
AMBRA1-208ENST00000529558 ZNF837Q96EG3 531 aaPredicted RBP4.68□□□□□ -1.66
AMBRA1-208ENST00000529558 MTFR1LQ9H019 292 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms