RNA–Protein interactions for RNA: ENST00000525812.1

RPUSD4-202, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-202ENST00000525812 ERVK-9P63128 1117 aa9.13□□□□□ -0.95
RPUSD4-202ENST00000525812 ERVK-24P63145 666 aa9.13□□□□□ -0.95
RPUSD4-202ENST00000525812 PICALMQ13492 652 aa9.13□□□□□ -0.95
RPUSD4-202ENST00000525812 LRRC26Q2I0M4 334 aa9.13□□□□□ -0.95
RPUSD4-202ENST00000525812 GPR142Q7Z601 462 aa9.13□□□□□ -0.95
RPUSD4-202ENST00000525812 PLEKHH3Q7Z736 793 aa9.13□□□□□ -0.95
RPUSD4-202ENST00000525812 CCDC84Q86UT8 332 aaPredicted RBP9.13□□□□□ -0.95
RPUSD4-202ENST00000525812 SPATA5Q8NB90 893 aa9.13□□□□□ -0.95
RPUSD4-202ENST00000525812 LPAR1Q92633 364 aa9.13□□□□□ -0.95
RPUSD4-202ENST00000525812 EDC3Q96F86 508 aaKnown RBP9.13□□□□□ -0.95
RPUSD4-202ENST00000525812 GUCD1Q96NT3 240 aa9.13□□□□□ -0.95
RPUSD4-202ENST00000525812 APBA2Q99767 749 aa9.13□□□□□ -0.95
RPUSD4-202ENST00000525812 API5Q9BZZ5 524 aaKnown RBP9.13□□□□□ -0.95
RPUSD4-202ENST00000525812 SIL1Q9H173 461 aa9.13□□□□□ -0.95
RPUSD4-202ENST00000525812 TMOD4Q9NZQ9 345 aa9.13□□□□□ -0.95
RPUSD4-202ENST00000525812 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.13□□□□□ -0.95
RPUSD4-202ENST00000525812 TAOK2Q9UL54 1235 aa9.13□□□□□ -0.95
RPUSD4-202ENST00000525812 DOCK2Q92608 1830 aa9.12□□□□□ -0.95
RPUSD4-202ENST00000525812 LOC285556D6RIA3 1793 aa9.12□□□□□ -0.95
RPUSD4-202ENST00000525812 SLC15A5A6NIM6 579 aa9.12□□□□□ -0.95
RPUSD4-202ENST00000525812 ANP32CO43423 234 aa9.12□□□□□ -0.95
RPUSD4-202ENST00000525812 BAG3O95817 575 aa9.12□□□□□ -0.95
RPUSD4-202ENST00000525812 GNAI3P08754 354 aa9.12□□□□□ -0.95
RPUSD4-202ENST00000525812 UQCRFS1P1P0C7P4 283 aa9.12□□□□□ -0.95
RPUSD4-202ENST00000525812 ZKSCAN1P17029 563 aaPredicted RBP9.12□□□□□ -0.95
RPUSD4-202ENST00000525812 CCNA1P78396 465 aa9.12□□□□□ -0.95
RPUSD4-202ENST00000525812 MAP2K5Q13163 448 aa9.12□□□□□ -0.95
RPUSD4-202ENST00000525812 PDE3AQ14432 1141 aa9.12□□□□□ -0.95
RPUSD4-202ENST00000525812 C1orf53Q5VUE5 145 aa9.12□□□□□ -0.95
RPUSD4-202ENST00000525812 USP17L2Q6R6M4 530 aa9.12□□□□□ -0.95
RPUSD4-202ENST00000525812 CERS3Q8IU89 383 aa9.12□□□□□ -0.95
RPUSD4-202ENST00000525812 ZNF512BQ96KM6 892 aaPredicted RBP9.12□□□□□ -0.95
RPUSD4-202ENST00000525812 GPR108Q9NPR9 543 aa9.12□□□□□ -0.95
RPUSD4-202ENST00000525812 EMILIN3Q9NT22 766 aa9.12□□□□□ -0.95
RPUSD4-202ENST00000525812 PA2G4Q9UQ80 394 aaKnown RBP9.12□□□□□ -0.95
RPUSD4-202ENST00000525812 PLXNB2O15031 1838 aa9.12□□□□□ -0.95
RPUSD4-202ENST00000525812 TMEM265A0A087WTH1 108 aa9.11□□□□□ -0.95
RPUSD4-202ENST00000525812 FAM196BA6NMK8 535 aa9.11□□□□□ -0.95
RPUSD4-202ENST00000525812 DNM1LO00429 736 aa9.11□□□□□ -0.95
RPUSD4-202ENST00000525812 STRNO43815 780 aa9.11□□□□□ -0.95
RPUSD4-202ENST00000525812 PTPREP23469 700 aa9.11□□□□□ -0.95
RPUSD4-202ENST00000525812 CCND3P30281 292 aaPredicted RBP9.11□□□□□ -0.95
RPUSD4-202ENST00000525812 JAG1P78504 1218 aa9.11□□□□□ -0.95
RPUSD4-202ENST00000525812 SMAD3P84022 425 aaKnown RBP9.11□□□□□ -0.95
RPUSD4-202ENST00000525812 MTMR2Q13614 643 aa9.11□□□□□ -0.95
RPUSD4-202ENST00000525812 SNX17Q15036 470 aa9.11□□□□□ -0.95
RPUSD4-202ENST00000525812 MFSD14CQ5VZR4 134 aa9.11□□□□□ -0.95
RPUSD4-202ENST00000525812 TATDN1Q6P1N9 297 aa9.11□□□□□ -0.95
RPUSD4-202ENST00000525812 ATF7IPQ6VMQ6 1270 aa9.11□□□□□ -0.95
RPUSD4-202ENST00000525812 TEX11Q8IYF3 940 aa9.11□□□□□ -0.95
RPUSD4-202ENST00000525812 LBHD1Q9BQE6 289 aaPredicted RBP9.11□□□□□ -0.95
RPUSD4-202ENST00000525812 KIAA1683Q9H0B3 1180 aa9.11□□□□□ -0.95
RPUSD4-202ENST00000525812 PORCNQ9H237 461 aa9.11□□□□□ -0.95
RPUSD4-202ENST00000525812 SEMA6BQ9H3T3 888 aa9.11□□□□□ -0.95
RPUSD4-202ENST00000525812 DNAJC18Q9H819 358 aa9.11□□□□□ -0.95
RPUSD4-202ENST00000525812 MYH13Q9UKX3 1938 aa9.11□□□□□ -0.95
RPUSD4-202ENST00000525812 USP17L15C9J2P7 530 aa9.1□□□□□ -0.95
RPUSD4-202ENST00000525812 USP17L13C9JLJ4 530 aa9.1□□□□□ -0.95
RPUSD4-202ENST00000525812 USP17L11C9JVI0 530 aa9.1□□□□□ -0.95
RPUSD4-202ENST00000525812 USP17L18D6R9N7 530 aa9.1□□□□□ -0.95
RPUSD4-202ENST00000525812 USP17L22D6RA61 530 aa9.1□□□□□ -0.95
RPUSD4-202ENST00000525812 USP17L17D6RBQ6 530 aa9.1□□□□□ -0.95
RPUSD4-202ENST00000525812 USP17L19D6RCP7 530 aa9.1□□□□□ -0.95
RPUSD4-202ENST00000525812 USP17L20D6RJB6 530 aa9.1□□□□□ -0.95
RPUSD4-202ENST00000525812 USP14P54578 494 aa9.1□□□□□ -0.95
RPUSD4-202ENST00000525812 USP17L24Q0WX57 530 aa9.1□□□□□ -0.95
RPUSD4-202ENST00000525812 TFCP2Q12800 502 aa9.1□□□□□ -0.95
RPUSD4-202ENST00000525812 CATSPERGQ6ZRH7 1159 aa9.1□□□□□ -0.95
RPUSD4-202ENST00000525812 ARRDC4Q8NCT1 418 aa9.1□□□□□ -0.95
RPUSD4-202ENST00000525812 DDX20Q9UHI6 824 aaKnown RBP9.1□□□□□ -0.95
RPUSD4-202ENST00000525812 VCANP13611 3396 aa9.09□□□□□ -0.95
RPUSD4-202ENST00000525812 DDX60LQ5H9U9 1706 aaKnown RBP9.09□□□□□ -0.95
RPUSD4-202ENST00000525812 CNMDO75829 334 aa9.09□□□□□ -0.95
RPUSD4-202ENST00000525812 MCAMP43121 646 aa9.09□□□□□ -0.95
RPUSD4-202ENST00000525812 MDM2Q00987 491 aaPredicted RBP9.09□□□□□ -0.95
RPUSD4-202ENST00000525812 GRB14Q14449 540 aa9.09□□□□□ -0.95
RPUSD4-202ENST00000525812 CCL14Q16627 93 aa9.09□□□□□ -0.95
RPUSD4-202ENST00000525812 ZNF697Q5TEC3 545 aa9.09□□□□□ -0.95
RPUSD4-202ENST00000525812 OLFML2BQ68BL8 750 aa9.09□□□□□ -0.95
RPUSD4-202ENST00000525812 TBC1D9Q6ZT07 1266 aa9.09□□□□□ -0.95
RPUSD4-202ENST00000525812 CCAR1Q8IX12 1150 aaKnown RBP9.09□□□□□ -0.95
RPUSD4-202ENST00000525812 SH3RF3Q8TEJ3 882 aaPredicted RBP9.09□□□□□ -0.95
RPUSD4-202ENST00000525812 SYMPKQ92797 1274 aaKnown RBP9.09□□□□□ -0.95
RPUSD4-202ENST00000525812 CDX2Q99626 313 aaPredicted RBP9.09□□□□□ -0.95
RPUSD4-202ENST00000525812 NOL10Q9BSC4 688 aaKnown RBP9.09□□□□□ -0.95
RPUSD4-202ENST00000525812 SENP6Q9GZR1 1112 aaPredicted RBP9.09□□□□□ -0.95
RPUSD4-202ENST00000525812 EHD4Q9H223 541 aa9.09□□□□□ -0.95
RPUSD4-202ENST00000525812 PRDM6Q9NQX0 595 aa9.09□□□□□ -0.95
RPUSD4-202ENST00000525812 LRP2BPQ9P2M1 347 aa9.09□□□□□ -0.95
RPUSD4-202ENST00000525812 ZBTB21Q9ULJ3 1066 aa9.09□□□□□ -0.95
RPUSD4-202ENST00000525812 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.09□□□□□ -0.95
RPUSD4-202ENST00000525812 PRUNE2Q8WUY3 3088 aa9.08□□□□□ -0.96
RPUSD4-202ENST00000525812 SRGAP3O43295 1099 aa9.08□□□□□ -0.96
RPUSD4-202ENST00000525812 NAA16Q6N069 864 aaPredicted RBP9.08□□□□□ -0.96
RPUSD4-202ENST00000525812 SLC39A5Q6ZMH5 540 aa9.08□□□□□ -0.96
RPUSD4-202ENST00000525812 ABRAQ8N0Z2 381 aa9.08□□□□□ -0.96
RPUSD4-202ENST00000525812 SHCBP1Q8NEM2 672 aa9.08□□□□□ -0.96
RPUSD4-202ENST00000525812 NEUROD6Q96NK8 337 aa9.08□□□□□ -0.96
RPUSD4-202ENST00000525812 MEIS3Q99687 375 aa9.08□□□□□ -0.96
RPUSD4-202ENST00000525812 SMC4Q9NTJ3 1288 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms