RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 PDE4DQ08499 809 aa19.26■□□□□ 0.67
BEST1-203ENST00000524877 NONOQ15233 471 aaKnown RBP eCLIP19.26■□□□□ 0.67
BEST1-203ENST00000524877 SLFN13Q68D06 897 aa19.26■□□□□ 0.67
BEST1-203ENST00000524877 HS2ST1Q7LGA3 356 aa19.26■□□□□ 0.67
BEST1-203ENST00000524877 MLXIPQ9HAP2 919 aa19.26■□□□□ 0.67
BEST1-203ENST00000524877 FAM193AP78312 1265 aa19.25■□□□□ 0.67
BEST1-203ENST00000524877 SP8Q8IXZ3 490 aa19.25■□□□□ 0.67
BEST1-203ENST00000524877 MARCKSP29966 332 aaPredicted RBP19.25■□□□□ 0.67
BEST1-203ENST00000524877 PODNQ7Z5L7 613 aa19.25■□□□□ 0.67
BEST1-203ENST00000524877 NUP88Q99567 741 aaPredicted RBP19.25■□□□□ 0.67
BEST1-203ENST00000524877 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.25■□□□□ 0.67
BEST1-203ENST00000524877 GCOM1H8Y6P7 765 aaPredicted RBP19.25■□□□□ 0.67
BEST1-203ENST00000524877 POLR2MP0CAP2 368 aa19.25■□□□□ 0.67
BEST1-203ENST00000524877 PIK3AP1Q6ZUJ8 805 aa19.25■□□□□ 0.67
BEST1-203ENST00000524877 LRRC47Q8N1G4 583 aaKnown RBP19.25■□□□□ 0.67
BEST1-203ENST00000524877 PNMA3Q9UL41 463 aa19.25■□□□□ 0.67
BEST1-203ENST00000524877 DDX39AO00148 427 aaKnown RBP19.25■□□□□ 0.67
BEST1-203ENST00000524877 YEATS4O95619 227 aa19.25■□□□□ 0.67
BEST1-203ENST00000524877 TDRD12Q587J7 1177 aaKnown RBP19.25■□□□□ 0.67
BEST1-203ENST00000524877 MRPS27Q92552 414 aaKnown RBP19.25■□□□□ 0.67
BEST1-203ENST00000524877 MST1RQ04912 1400 aa19.24■□□□□ 0.67
BEST1-203ENST00000524877 NRKQ7Z2Y5 1582 aa19.24■□□□□ 0.67
BEST1-203ENST00000524877 TBC1D10BQ4KMP7 808 aaPredicted RBP19.24■□□□□ 0.67
BEST1-203ENST00000524877 DHX37Q8IY37 1157 aaKnown RBP19.24■□□□□ 0.67
BEST1-203ENST00000524877 SYNCQ9H7C4 482 aa19.24■□□□□ 0.67
BEST1-203ENST00000524877 CD163L1Q9NR16 1453 aa19.24■□□□□ 0.67
BEST1-203ENST00000524877 SPTLC2O15270 562 aa19.24■□□□□ 0.67
BEST1-203ENST00000524877 FAM47CQ5HY64 1035 aa19.24■□□□□ 0.67
BEST1-203ENST00000524877 DHX58Q96C10 678 aa19.24■□□□□ 0.67
BEST1-203ENST00000524877 FRMPD2Q68DX3 1309 aaPredicted RBP19.24■□□□□ 0.67
BEST1-203ENST00000524877 BIN1O00499 593 aa19.24■□□□□ 0.67
BEST1-203ENST00000524877 ENOX2Q16206 610 aaKnown RBP19.24■□□□□ 0.67
BEST1-203ENST00000524877 IQCEQ6IPM2 695 aa19.24■□□□□ 0.67
BEST1-203ENST00000524877 CCDC112Q8NEF3 446 aa19.24■□□□□ 0.67
BEST1-203ENST00000524877 GPR101Q96P66 508 aaPredicted RBP19.24■□□□□ 0.67
BEST1-203ENST00000524877 USP26Q9BXU7 913 aa19.24■□□□□ 0.67
BEST1-203ENST00000524877 STRN3Q13033 797 aa19.24■□□□□ 0.67
BEST1-203ENST00000524877 ZSCAN30Q86W11 494 aa19.24■□□□□ 0.67
BEST1-203ENST00000524877 SYCE3A1L190 88 aa19.23■□□□□ 0.67
BEST1-203ENST00000524877 ZEB2O60315 1214 aa19.23■□□□□ 0.67
BEST1-203ENST00000524877 LINC00116Q8NCU8 138 aa19.23■□□□□ 0.67
BEST1-203ENST00000524877 ZNF174Q15697 407 aa19.23■□□□□ 0.67
BEST1-203ENST00000524877 NCAPH2Q6IBW4 605 aa19.23■□□□□ 0.67
BEST1-203ENST00000524877 PI4KBQ9UBF8 816 aa19.23■□□□□ 0.67
BEST1-203ENST00000524877 SKIDA1Q1XH10 827 aa19.23■□□□□ 0.67
BEST1-203ENST00000524877 TMEM232C9JQI7 657 aa19.23■□□□□ 0.67
BEST1-203ENST00000524877 PLCD1P51178 756 aa19.23■□□□□ 0.67
BEST1-203ENST00000524877 UBE2HP62256 183 aa19.23■□□□□ 0.67
BEST1-203ENST00000524877 MKRN3Q13064 507 aaKnown RBP19.23■□□□□ 0.67
BEST1-203ENST00000524877 SV2BQ7L1I2 683 aa19.23■□□□□ 0.67
BEST1-203ENST00000524877 CCDC65Q8IXS2 484 aa19.23■□□□□ 0.67
BEST1-203ENST00000524877 LLPHQ9BRT6 129 aaKnown RBP19.23■□□□□ 0.67
BEST1-203ENST00000524877 CENPHQ9H3R5 247 aa19.23■□□□□ 0.67
BEST1-203ENST00000524877 CCPG1Q9ULG6 757 aa19.23■□□□□ 0.67
BEST1-203ENST00000524877 E7EWF7 191 aa19.23■□□□□ 0.67
BEST1-203ENST00000524877 PSMA7O14818 248 aa19.23■□□□□ 0.67
BEST1-203ENST00000524877 FBXO11Q86XK2 927 aa19.23■□□□□ 0.67
BEST1-203ENST00000524877 TRIM6Q9C030 488 aaPredicted RBP19.23■□□□□ 0.67
BEST1-203ENST00000524877 A0A0G2JLW4 131 aa19.22■□□□□ 0.67
BEST1-203ENST00000524877 ARID4AP29374 1257 aaPredicted RBP19.22■□□□□ 0.67
BEST1-203ENST00000524877 NBPF3Q9H094 633 aa19.22■□□□□ 0.67
BEST1-203ENST00000524877 ARHGEF35A5YM69 484 aa19.22■□□□□ 0.67
BEST1-203ENST00000524877 PPM1FP49593 454 aaPredicted RBP19.22■□□□□ 0.67
BEST1-203ENST00000524877 CHRNA5P30532 468 aa19.22■□□□□ 0.67
BEST1-203ENST00000524877 RILPL1Q5EBL4 403 aa19.22■□□□□ 0.67
BEST1-203ENST00000524877 TICAM2Q86XR7 235 aa19.22■□□□□ 0.67
BEST1-203ENST00000524877 FNBP4Q8N3X1 1017 aaPredicted RBP19.22■□□□□ 0.67
BEST1-203ENST00000524877 EXOC7Q9UPT5 735 aa19.22■□□□□ 0.67
BEST1-203ENST00000524877 SETD1BQ9UPS6 1966 aaKnown RBP19.21■□□□□ 0.67
BEST1-203ENST00000524877 F13A1P00488 732 aa19.21■□□□□ 0.67
BEST1-203ENST00000524877 PRKAG2Q9UGJ0 569 aa19.21■□□□□ 0.67
BEST1-203ENST00000524877 SNX14Q9Y5W7 946 aa19.21■□□□□ 0.67
BEST1-203ENST00000524877 CRKP46108 304 aa19.21■□□□□ 0.67
BEST1-203ENST00000524877 HACE1Q8IYU2 909 aa19.21■□□□□ 0.67
BEST1-203ENST00000524877 EDC3Q96F86 508 aaKnown RBP19.21■□□□□ 0.67
BEST1-203ENST00000524877 GLG1Q92896 1179 aa19.21■□□□□ 0.67
BEST1-203ENST00000524877 CCDC169A6NNP5 214 aa19.21■□□□□ 0.67
BEST1-203ENST00000524877 EIF3JO75822 258 aaKnown RBP19.21■□□□□ 0.67
BEST1-203ENST00000524877 ARHGAP29Q52LW3 1261 aa19.21■□□□□ 0.67
BEST1-203ENST00000524877 CTR9Q6PD62 1173 aa19.21■□□□□ 0.67
BEST1-203ENST00000524877 FILIP1Q7Z7B0 1213 aa19.21■□□□□ 0.67
BEST1-203ENST00000524877 TESPA1A2RU30 521 aaPredicted RBP19.2■□□□□ 0.66
BEST1-203ENST00000524877 ZNF341Q9BYN7 854 aa19.2■□□□□ 0.66
BEST1-203ENST00000524877 DDAH1O94760 285 aa19.2■□□□□ 0.66
BEST1-203ENST00000524877 CNTNAP4Q9C0A0 1308 aa19.2■□□□□ 0.66
BEST1-203ENST00000524877 CPDO75976 1380 aa19.2■□□□□ 0.66
BEST1-203ENST00000524877 TTLL1O95922 423 aa19.2■□□□□ 0.66
BEST1-203ENST00000524877 SPOUT1Q5T280 376 aaKnown RBP19.2■□□□□ 0.66
BEST1-203ENST00000524877 KANSL2Q9H9L4 492 aa19.2■□□□□ 0.66
BEST1-203ENST00000524877 MED23Q9ULK4 1368 aa19.2■□□□□ 0.66
BEST1-203ENST00000524877 CRAMP1Q96RY5 1269 aa19.2■□□□□ 0.66
BEST1-203ENST00000524877 MINPP1Q9UNW1 487 aa19.2■□□□□ 0.66
BEST1-203ENST00000524877 GINS2Q9Y248 185 aa19.2■□□□□ 0.66
BEST1-203ENST00000524877 GPSM2P81274 684 aa19.19■□□□□ 0.66
BEST1-203ENST00000524877 MYL10Q9BUA6 226 aa19.19■□□□□ 0.66
BEST1-203ENST00000524877 AP5M1Q9H0R1 490 aa19.19■□□□□ 0.66
BEST1-203ENST00000524877 BICDL2A1A5D9 508 aa19.19■□□□□ 0.66
BEST1-203ENST00000524877 GDF11O95390 407 aa19.19■□□□□ 0.66
BEST1-203ENST00000524877 REXO1Q8N1G1 1221 aaKnown RBP19.19■□□□□ 0.66
BEST1-203ENST00000524877 GDPD2Q9HCC8 539 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms