RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 TXNRD2Q9NNW7 524 aa31.81■■■□□ 2.68
PVT1-219ENST00000523427 PLCG2P16885 1265 aa31.8■■■□□ 2.68
PVT1-219ENST00000523427 ATF7IPQ6VMQ6 1270 aa31.8■■■□□ 2.68
PVT1-219ENST00000523427 CCAR1Q8IX12 1150 aaKnown RBP31.8■■■□□ 2.68
PVT1-219ENST00000523427 GPRC5AQ8NFJ5 357 aa31.8■■■□□ 2.68
PVT1-219ENST00000523427 DNAJC18Q9H819 358 aa31.8■■■□□ 2.68
PVT1-219ENST00000523427 FLT1P17948 1338 aa31.79■■■□□ 2.68
PVT1-219ENST00000523427 PRKAR2AP13861 404 aaKnown RBP31.79■■■□□ 2.68
PVT1-219ENST00000523427 HERVK_113P62684 666 aa31.79■■■□□ 2.68
PVT1-219ENST00000523427 TNNI3KQ59H18 835 aa31.79■■■□□ 2.68
PVT1-219ENST00000523427 NUDT12Q9BQG2 462 aa31.79■■■□□ 2.68
PVT1-219ENST00000523427 PAGR1Q9BTK6 254 aa31.79■■■□□ 2.68
PVT1-219ENST00000523427 C11orf49Q9H6J7 331 aa31.79■■■□□ 2.68
PVT1-219ENST00000523427 FPGT-TNNI3KV9GXZ4 949 aa31.79■■■□□ 2.68
PVT1-219ENST00000523427 CYP2E1P05181 493 aaPredicted RBP31.78■■■□□ 2.68
PVT1-219ENST00000523427 FOXP4Q8IVH2 680 aaPredicted RBP31.78■■■□□ 2.68
PVT1-219ENST00000523427 ALPK3Q96L96 1907 aa31.78■■■□□ 2.68
PVT1-219ENST00000523427 USP17L10C9JJH3 530 aa31.77■■■□□ 2.68
PVT1-219ENST00000523427 HOXA7P31268 230 aaPredicted RBP31.77■■■□□ 2.68
PVT1-219ENST00000523427 PPP4CP60510 307 aa31.77■■■□□ 2.68
PVT1-219ENST00000523427 DYNLL1P63167 89 aaKnown RBP31.77■■■□□ 2.68
PVT1-219ENST00000523427 C19orf81C9J6K1 198 aa31.76■■■□□ 2.67
PVT1-219ENST00000523427 ZAP70P43403 619 aa31.76■■■□□ 2.67
PVT1-219ENST00000523427 MNX1P50219 401 aaPredicted RBP31.76■■■□□ 2.67
PVT1-219ENST00000523427 PDE3AQ14432 1141 aa31.76■■■□□ 2.67
PVT1-219ENST00000523427 GDF15Q99988 308 aa31.76■■■□□ 2.67
PVT1-219ENST00000523427 RBPJLQ9UBG7 517 aa31.76■■■□□ 2.67
PVT1-219ENST00000523427 ZBTB21Q9ULJ3 1066 aa31.76■■■□□ 2.67
PVT1-219ENST00000523427 Q3C1V9 767 aa31.75■■■□□ 2.67
PVT1-219ENST00000523427 TMEM57Q8N5G2 664 aa31.75■■■□□ 2.67
PVT1-219ENST00000523427 CWC22Q9HCG8 908 aaKnown RBP31.75■■■□□ 2.67
PVT1-219ENST00000523427 PIH1D3Q9NQM4 214 aaKnown RBP31.75■■■□□ 2.67
PVT1-219ENST00000523427 SURF6O75683 361 aaKnown RBP31.74■■■□□ 2.67
PVT1-219ENST00000523427 SOCS4Q8WXH5 440 aa31.74■■■□□ 2.67
PVT1-219ENST00000523427 PORCNQ9H237 461 aa31.74■■■□□ 2.67
PVT1-219ENST00000523427 C1orf115Q9H7X2 142 aa31.74■■■□□ 2.67
PVT1-219ENST00000523427 OGDHLQ9ULD0 1010 aa31.74■■■□□ 2.67
PVT1-219ENST00000523427 SIPA1L1O43166 1804 aa31.73■■■□□ 2.67
PVT1-219ENST00000523427 HLA-DOAP06340 250 aa31.73■■■□□ 2.67
PVT1-219ENST00000523427 ZKSCAN1P17029 563 aaPredicted RBP31.73■■■□□ 2.67
PVT1-219ENST00000523427 ZYXQ15942 572 aaKnown RBP31.73■■■□□ 2.67
PVT1-219ENST00000523427 GPR108Q9NPR9 543 aa31.73■■■□□ 2.67
PVT1-219ENST00000523427 CYP7A1P22680 504 aa31.72■■■□□ 2.67
PVT1-219ENST00000523427 MAPK4P31152 587 aa31.72■■■□□ 2.67
PVT1-219ENST00000523427 ERVK-9P63128 1117 aa31.72■■■□□ 2.67
PVT1-219ENST00000523427 ERVK-24P63145 666 aa31.72■■■□□ 2.67
PVT1-219ENST00000523427 CCL14Q16627 93 aa31.72■■■□□ 2.67
PVT1-219ENST00000523427 MAP3K21Q5TCX8 1036 aa31.72■■■□□ 2.67
PVT1-219ENST00000523427 EMILIN3Q9NT22 766 aa31.72■■■□□ 2.67
PVT1-219ENST00000523427 PLXNB2O15031 1838 aa31.71■■■□□ 2.67
PVT1-219ENST00000523427 DLL1O00548 723 aa31.71■■■□□ 2.67
PVT1-219ENST00000523427 GH2P01242 217 aa31.71■■■□□ 2.67
PVT1-219ENST00000523427 MAGEA10P43363 369 aaPredicted RBP31.71■■■□□ 2.67
PVT1-219ENST00000523427 CACNB2Q08289 660 aaPredicted RBP31.71■■■□□ 2.67
PVT1-219ENST00000523427 MIGA1Q8NAN2 632 aa31.71■■■□□ 2.67
PVT1-219ENST00000523427 NDUFB9Q9Y6M9 179 aa31.71■■■□□ 2.67
PVT1-219ENST00000523427 DDX60LQ5H9U9 1706 aaKnown RBP31.7■■■□□ 2.67
PVT1-219ENST00000523427 IDH1O75874 414 aaKnown RBP31.7■■■□□ 2.67
PVT1-219ENST00000523427 XRCC5P13010 732 aaKnown RBP31.7■■■□□ 2.67
PVT1-219ENST00000523427 CCND3P30281 292 aaPredicted RBP31.7■■■□□ 2.67
PVT1-219ENST00000523427 BMP8BP34820 402 aa31.7■■■□□ 2.67
PVT1-219ENST00000523427 POLA2Q14181 598 aa31.7■■■□□ 2.67
PVT1-219ENST00000523427 USP17L2Q6R6M4 530 aa31.7■■■□□ 2.67
PVT1-219ENST00000523427 GPR142Q7Z601 462 aa31.7■■■□□ 2.67
PVT1-219ENST00000523427 METTL16Q86W50 562 aaKnown RBP31.7■■■□□ 2.67
PVT1-219ENST00000523427 FEZ1Q99689 392 aa31.7■■■□□ 2.67
PVT1-219ENST00000523427 CCDC8Q9H0W5 538 aaPredicted RBP31.7■■■□□ 2.67
PVT1-219ENST00000523427 LAMA3Q16787 3333 aa31.69■■■□□ 2.66
PVT1-219ENST00000523427 USP5P45974 858 aa31.69■■■□□ 2.66
PVT1-219ENST00000523427 WDR78Q5VTH9 848 aa31.69■■■□□ 2.66
PVT1-219ENST00000523427 PLEKHH3Q7Z736 793 aa31.69■■■□□ 2.66
PVT1-219ENST00000523427 TLR7Q9NYK1 1049 aaKnown RBP31.69■■■□□ 2.66
PVT1-219ENST00000523427 RGS2P41220 211 aa31.68■■■□□ 2.66
PVT1-219ENST00000523427 ATP8B2P98198 1209 aa31.68■■■□□ 2.66
PVT1-219ENST00000523427 GINM1Q9NU53 330 aa31.68■■■□□ 2.66
PVT1-219ENST00000523427 PFASO15067 1338 aa31.68■■■□□ 2.66
PVT1-219ENST00000523427 ZKSCAN2Q63HK3 967 aa31.67■■■□□ 2.66
PVT1-219ENST00000523427 POTEEQ6S8J3 1075 aa31.67■■■□□ 2.66
PVT1-219ENST00000523427 Q7L0L9 218 aa31.67■■■□□ 2.66
PVT1-219ENST00000523427 TRMT44Q8IYL2 757 aaKnown RBP31.67■■■□□ 2.66
PVT1-219ENST00000523427 SSH3Q8TE77 659 aa31.67■■■□□ 2.66
PVT1-219ENST00000523427 UBE2OQ9C0C9 1292 aaKnown RBP31.67■■■□□ 2.66
PVT1-219ENST00000523427 DBNLQ9UJU6 430 aaKnown RBP31.67■■■□□ 2.66
PVT1-219ENST00000523427 RAB3GAP1Q15042 981 aa31.66■■■□□ 2.66
PVT1-219ENST00000523427 DEFB123Q8N688 67 aa31.66■■■□□ 2.66
PVT1-219ENST00000523427 MAST2Q6P0Q8 1798 aa31.66■■■□□ 2.66
PVT1-219ENST00000523427 MORN1Q5T089 497 aa31.65■■■□□ 2.66
PVT1-219ENST00000523427 MAGEB6Q8N7X4 407 aa31.65■■■□□ 2.66
PVT1-219ENST00000523427 USP6NLQ92738 828 aa31.65■■■□□ 2.66
PVT1-219ENST00000523427 MYO5AQ9Y4I1 1855 aaKnown RBP31.65■■■□□ 2.66
PVT1-219ENST00000523427 CDK5RAP2Q96SN8 1893 aa31.64■■■□□ 2.66
PVT1-219ENST00000523427 GTF3C2Q8WUA4 911 aaPredicted RBP31.64■■■□□ 2.66
PVT1-219ENST00000523427 ZNF512BQ96KM6 892 aaPredicted RBP31.64■■■□□ 2.66
PVT1-219ENST00000523427 APBA2Q99767 749 aa31.64■■■□□ 2.66
PVT1-219ENST00000523427 TDHQ8IZJ6 230 aa31.63■■■□□ 2.65
PVT1-219ENST00000523427 USP17L15C9J2P7 530 aa31.62■■■□□ 2.65
PVT1-219ENST00000523427 USP17L13C9JLJ4 530 aa31.62■■■□□ 2.65
PVT1-219ENST00000523427 USP17L11C9JVI0 530 aa31.62■■■□□ 2.65
PVT1-219ENST00000523427 USP17L18D6R9N7 530 aa31.62■■■□□ 2.65
PVT1-219ENST00000523427 USP17L22D6RA61 530 aa31.62■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms