RNA–Protein interactions for RNA: ENST00000506831.1

CCHCR1-220, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-220ENST00000506831 TMOD4Q9NZQ9 345 aa13.85□□□□□ -0.19
CCHCR1-220ENST00000506831 TAOK2Q9UL54 1235 aa13.85□□□□□ -0.19
CCHCR1-220ENST00000506831 FPGT-TNNI3KV9GXZ4 949 aa13.85□□□□□ -0.19
CCHCR1-220ENST00000506831 XRCC5P13010 732 aaKnown RBP13.84□□□□□ -0.19
CCHCR1-220ENST00000506831 IRX3P78415 501 aaPredicted RBP13.84□□□□□ -0.19
CCHCR1-220ENST00000506831 ATP8B2P98198 1209 aa13.84□□□□□ -0.19
CCHCR1-220ENST00000506831 TTC39AQ5SRH9 613 aa13.84□□□□□ -0.19
CCHCR1-220ENST00000506831 SSH3Q8TE77 659 aa13.84□□□□□ -0.19
CCHCR1-220ENST00000506831 SIPA1L1O43166 1804 aa13.83□□□□□ -0.2
CCHCR1-220ENST00000506831 FOCADQ5VW36 1801 aa13.83□□□□□ -0.2
CCHCR1-220ENST00000506831 USP17L10C9JJH3 530 aa13.83□□□□□ -0.2
CCHCR1-220ENST00000506831 CYP2E1P05181 493 aaPredicted RBP13.83□□□□□ -0.2
CCHCR1-220ENST00000506831 MTMR2Q13614 643 aa13.83□□□□□ -0.2
CCHCR1-220ENST00000506831 TMED8Q6PL24 325 aaPredicted RBP13.83□□□□□ -0.2
CCHCR1-220ENST00000506831 CERS3Q8IU89 383 aa13.83□□□□□ -0.2
CCHCR1-220ENST00000506831 ITPRIPQ8IWB1 547 aa13.83□□□□□ -0.2
CCHCR1-220ENST00000506831 TRMT44Q8IYL2 757 aaKnown RBP13.83□□□□□ -0.2
CCHCR1-220ENST00000506831 GTF3C2Q8WUA4 911 aaPredicted RBP13.83□□□□□ -0.2
CCHCR1-220ENST00000506831 TGFBRAP1Q8WUH2 860 aa13.83□□□□□ -0.2
CCHCR1-220ENST00000506831 DBNDD2Q9BQY9 259 aa13.83□□□□□ -0.2
CCHCR1-220ENST00000506831 DNAJC18Q9H819 358 aa13.83□□□□□ -0.2
CCHCR1-220ENST00000506831 FLT1P17948 1338 aa13.83□□□□□ -0.2
CCHCR1-220ENST00000506831 MAST2Q6P0Q8 1798 aa13.83□□□□□ -0.2
CCHCR1-220ENST00000506831 CDK5RAP2Q96SN8 1893 aa13.82□□□□□ -0.2
CCHCR1-220ENST00000506831 BMP8BP34820 402 aa13.82□□□□□ -0.2
CCHCR1-220ENST00000506831 MAP3K21Q5TCX8 1036 aa13.82□□□□□ -0.2
CCHCR1-220ENST00000506831 MAPKAPK5Q8IW41 473 aa13.82□□□□□ -0.2
CCHCR1-220ENST00000506831 CRACR2BQ8N4Y2 399 aaPredicted RBP13.82□□□□□ -0.2
CCHCR1-220ENST00000506831 GPRC5AQ8NFJ5 357 aa13.82□□□□□ -0.2
CCHCR1-220ENST00000506831 SOCS4Q8WXH5 440 aa13.82□□□□□ -0.2
CCHCR1-220ENST00000506831 P2RX7Q99572 595 aaKnown RBP13.82□□□□□ -0.2
CCHCR1-220ENST00000506831 NUDT12Q9BQG2 462 aa13.82□□□□□ -0.2
CCHCR1-220ENST00000506831 TRIM34Q9BYJ4 488 aa13.82□□□□□ -0.2
CCHCR1-220ENST00000506831 SNRKQ9NRH2 765 aa13.82□□□□□ -0.2
CCHCR1-220ENST00000506831 OGDHLQ9ULD0 1010 aa13.82□□□□□ -0.2
CCHCR1-220ENST00000506831 COG6Q9Y2V7 657 aa13.82□□□□□ -0.2
CCHCR1-220ENST00000506831 NOP58Q9Y2X3 529 aaKnown RBP13.82□□□□□ -0.2
CCHCR1-220ENST00000506831 PLXNB2O15031 1838 aa13.82□□□□□ -0.2
CCHCR1-220ENST00000506831 ALPK3Q96L96 1907 aa13.82□□□□□ -0.2
CCHCR1-220ENST00000506831 HLA-DOAP06340 250 aa13.81□□□□□ -0.2
CCHCR1-220ENST00000506831 MAPK4P31152 587 aa13.81□□□□□ -0.2
CCHCR1-220ENST00000506831 HERVK_113P62684 666 aa13.81□□□□□ -0.2
CCHCR1-220ENST00000506831 ADGRA1Q86SQ6 560 aa13.81□□□□□ -0.2
CCHCR1-220ENST00000506831 TRIB2Q92519 343 aa13.81□□□□□ -0.2
CCHCR1-220ENST00000506831 GDF15Q99988 308 aa13.81□□□□□ -0.2
CCHCR1-220ENST00000506831 NBPF3Q9H094 633 aa13.81□□□□□ -0.2
CCHCR1-220ENST00000506831 PALD1Q9ULE6 856 aa13.81□□□□□ -0.2
CCHCR1-220ENST00000506831 ZBTB21Q9ULJ3 1066 aa13.81□□□□□ -0.2
CCHCR1-220ENST00000506831 SURF6O75683 361 aaKnown RBP13.8□□□□□ -0.2
CCHCR1-220ENST00000506831 ZAP70P43403 619 aa13.8□□□□□ -0.2
CCHCR1-220ENST00000506831 MNX1P50219 401 aaPredicted RBP13.8□□□□□ -0.2
CCHCR1-220ENST00000506831 JAG1P78504 1218 aa13.8□□□□□ -0.2
CCHCR1-220ENST00000506831 OS9Q13438 667 aaPredicted RBP13.8□□□□□ -0.2
CCHCR1-220ENST00000506831 GPR153Q6NV75 609 aa13.8□□□□□ -0.2
CCHCR1-220ENST00000506831 DIS3LQ8TF46 1054 aaKnown RBP13.8□□□□□ -0.2
CCHCR1-220ENST00000506831 TXNRD2Q9NNW7 524 aa13.8□□□□□ -0.2
CCHCR1-220ENST00000506831 RBPJLQ9UBG7 517 aa13.8□□□□□ -0.2
CCHCR1-220ENST00000506831 STAP2Q9UGK3 403 aa13.8□□□□□ -0.2
CCHCR1-220ENST00000506831 MYO5AQ9Y4I1 1855 aaKnown RBP13.8□□□□□ -0.2
CCHCR1-220ENST00000506831 CYP2B6P20813 491 aa13.79□□□□□ -0.2
CCHCR1-220ENST00000506831 ERVK-9P63128 1117 aa13.79□□□□□ -0.2
CCHCR1-220ENST00000506831 ERVK-24P63145 666 aa13.79□□□□□ -0.2
CCHCR1-220ENST00000506831 IRX6P78412 446 aaPredicted RBP13.79□□□□□ -0.2
CCHCR1-220ENST00000506831 TRIM32Q13049 653 aa13.79□□□□□ -0.2
CCHCR1-220ENST00000506831 TATDN1Q6P1N9 297 aa13.79□□□□□ -0.2
CCHCR1-220ENST00000506831 USP17L2Q6R6M4 530 aa13.79□□□□□ -0.2
CCHCR1-220ENST00000506831 USP6NLQ92738 828 aa13.79□□□□□ -0.2
CCHCR1-220ENST00000506831 C12orf42Q96LP6 360 aa13.79□□□□□ -0.2
CCHCR1-220ENST00000506831 CRBNQ96SW2 442 aa13.79□□□□□ -0.2
CCHCR1-220ENST00000506831 C11orf49Q9H6J7 331 aa13.79□□□□□ -0.2
CCHCR1-220ENST00000506831 EMILIN3Q9NT22 766 aa13.79□□□□□ -0.2
CCHCR1-220ENST00000506831 DBNLQ9UJU6 430 aaKnown RBP13.79□□□□□ -0.2
CCHCR1-220ENST00000506831 GDF11O95390 407 aa13.78□□□□□ -0.2
CCHCR1-220ENST00000506831 PRKAR2AP13861 404 aaKnown RBP13.78□□□□□ -0.2
CCHCR1-220ENST00000506831 CYP7A1P22680 504 aa13.78□□□□□ -0.2
CCHCR1-220ENST00000506831 Q3C1V9 767 aa13.78□□□□□ -0.2
CCHCR1-220ENST00000506831 CCAR1Q8IX12 1150 aaKnown RBP13.78□□□□□ -0.2
CCHCR1-220ENST00000506831 EHD4Q9H223 541 aa13.78□□□□□ -0.2
CCHCR1-220ENST00000506831 PIH1D3Q9NQM4 214 aaKnown RBP13.78□□□□□ -0.2
CCHCR1-220ENST00000506831 DDX19BQ9UMR2 479 aa13.78□□□□□ -0.2
CCHCR1-220ENST00000506831 MYH1P12882 1939 aa13.78□□□□□ -0.2
CCHCR1-220ENST00000506831 ZKSCAN1P17029 563 aaPredicted RBP13.77□□□□□ -0.21
CCHCR1-220ENST00000506831 RGS2P41220 211 aa13.77□□□□□ -0.21
CCHCR1-220ENST00000506831 USP14P54578 494 aa13.77□□□□□ -0.21
CCHCR1-220ENST00000506831 DYNLL1P63167 89 aaKnown RBP13.77□□□□□ -0.21
CCHCR1-220ENST00000506831 DDX60LQ5H9U9 1706 aaKnown RBP13.77□□□□□ -0.21
CCHCR1-220ENST00000506831 MORN1Q5T089 497 aa13.77□□□□□ -0.21
CCHCR1-220ENST00000506831 GPR142Q7Z601 462 aa13.77□□□□□ -0.21
CCHCR1-220ENST00000506831 PLEKHH3Q7Z736 793 aa13.77□□□□□ -0.21
CCHCR1-220ENST00000506831 TTC6Q86TZ1 520 aa13.77□□□□□ -0.21
CCHCR1-220ENST00000506831 SAP30BPQ9UHR5 308 aaKnown RBP13.77□□□□□ -0.21
CCHCR1-220ENST00000506831 SERPINB13Q9UIV8 391 aa13.77□□□□□ -0.21
CCHCR1-220ENST00000506831 RABGAP1Q9Y3P9 1069 aa13.77□□□□□ -0.21
CCHCR1-220ENST00000506831 USP17L15C9J2P7 530 aa13.76□□□□□ -0.21
CCHCR1-220ENST00000506831 USP17L13C9JLJ4 530 aa13.76□□□□□ -0.21
CCHCR1-220ENST00000506831 USP17L11C9JVI0 530 aa13.76□□□□□ -0.21
CCHCR1-220ENST00000506831 USP17L18D6R9N7 530 aa13.76□□□□□ -0.21
CCHCR1-220ENST00000506831 USP17L22D6RA61 530 aa13.76□□□□□ -0.21
CCHCR1-220ENST00000506831 USP17L17D6RBQ6 530 aa13.76□□□□□ -0.21
CCHCR1-220ENST00000506831 USP17L19D6RCP7 530 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms