RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 DIAPH1O60610 1272 aaKnown RBP6.87□□□□□ -1.31
SCLT1-206ENST00000503565 TIAF1O95411 115 aa6.87□□□□□ -1.31
SCLT1-206ENST00000503565 GSTP1P09211 210 aaKnown RBP6.87□□□□□ -1.31
SCLT1-206ENST00000503565 MAP1SQ66K74 1059 aaPredicted RBP6.87□□□□□ -1.31
SCLT1-206ENST00000503565 SCARA3Q6AZY7 606 aa6.87□□□□□ -1.31
SCLT1-206ENST00000503565 HOMER1Q86YM7 354 aa6.87□□□□□ -1.31
SCLT1-206ENST00000503565 JMYQ8N9B5 988 aa6.87□□□□□ -1.31
SCLT1-206ENST00000503565 C19orf47Q8N9M1 422 aaKnown RBP6.87□□□□□ -1.31
SCLT1-206ENST00000503565 ZCRB1Q8TBF4 217 aaKnown RBP6.87□□□□□ -1.31
SCLT1-206ENST00000503565 RNF208Q9H0X6 261 aa6.87□□□□□ -1.31
SCLT1-206ENST00000503565 SPC25Q9HBM1 224 aa6.87□□□□□ -1.31
SCLT1-206ENST00000503565 LOC100996750A0A140TA64 210 aa6.86□□□□□ -1.31
SCLT1-206ENST00000503565 MEIS3P2A8K0S8 358 aa6.86□□□□□ -1.31
SCLT1-206ENST00000503565 UPK3BL1B0FP48 263 aa6.86□□□□□ -1.31
SCLT1-206ENST00000503565 UPK3BL2E5RIL1 263 aa6.86□□□□□ -1.31
SCLT1-206ENST00000503565 GFRA2O00451 464 aa6.86□□□□□ -1.31
SCLT1-206ENST00000503565 DRD2P14416 443 aa6.86□□□□□ -1.31
SCLT1-206ENST00000503565 IBSPP21815 317 aaPredicted RBP6.86□□□□□ -1.31
SCLT1-206ENST00000503565 GYS2P54840 703 aa6.86□□□□□ -1.31
SCLT1-206ENST00000503565 ANAPC15P60006 121 aa6.86□□□□□ -1.31
SCLT1-206ENST00000503565 PPP2R5EQ16537 467 aa6.86□□□□□ -1.31
SCLT1-206ENST00000503565 TKFCQ3LXA3 575 aa6.86□□□□□ -1.31
SCLT1-206ENST00000503565 C2orf27AQ580R0 203 aa6.86□□□□□ -1.31
SCLT1-206ENST00000503565 MRM1Q6IN84 353 aaKnown RBP6.86□□□□□ -1.31
SCLT1-206ENST00000503565 C6orf15Q6UXA7 325 aaPredicted RBP6.86□□□□□ -1.31
SCLT1-206ENST00000503565 SPATC1Q76KD6 591 aa6.86□□□□□ -1.31
SCLT1-206ENST00000503565 TTC6Q86TZ1 520 aa6.86□□□□□ -1.31
SCLT1-206ENST00000503565 RPUSD2Q8IZ73 545 aaKnown RBP6.86□□□□□ -1.31
SCLT1-206ENST00000503565 SMG8Q8ND04 991 aaKnown RBP6.86□□□□□ -1.31
SCLT1-206ENST00000503565 KRTAP4-6Q9BYQ5 205 aa6.86□□□□□ -1.31
SCLT1-206ENST00000503565 SUGCTQ9HAC7 445 aa6.86□□□□□ -1.31
SCLT1-206ENST00000503565 PRKAB1Q9Y478 270 aa6.86□□□□□ -1.31
SCLT1-206ENST00000503565 PRR36Q9H6K5 1346 aa6.85□□□□□ -1.31
SCLT1-206ENST00000503565 AP3B2Q13367 1082 aa6.85□□□□□ -1.31
SCLT1-206ENST00000503565 POU4F3Q15319 338 aa6.85□□□□□ -1.31
SCLT1-206ENST00000503565 MTERF2Q49AM1 385 aa6.85□□□□□ -1.31
SCLT1-206ENST00000503565 EXOSC6Q5RKV6 272 aaKnown RBP6.85□□□□□ -1.31
SCLT1-206ENST00000503565 C16orf86Q6ZW13 317 aa6.85□□□□□ -1.31
SCLT1-206ENST00000503565 FAM178BQ8IXR5 827 aa6.85□□□□□ -1.31
SCLT1-206ENST00000503565 MYRFLQ96LU7 910 aa6.85□□□□□ -1.31
SCLT1-206ENST00000503565 CEP41Q9BYV8 373 aa6.85□□□□□ -1.31
SCLT1-206ENST00000503565 PFDN2Q9UHV9 154 aa6.85□□□□□ -1.31
SCLT1-206ENST00000503565 CORINQ9Y5Q5 1042 aa6.85□□□□□ -1.31
SCLT1-206ENST00000503565 MARCH6O60337 910 aa6.84□□□□□ -1.31
SCLT1-206ENST00000503565 DDAH1O94760 285 aa6.84□□□□□ -1.31
SCLT1-206ENST00000503565 HTR3BO95264 441 aa6.84□□□□□ -1.31
SCLT1-206ENST00000503565 AMPD3Q01432 767 aa6.84□□□□□ -1.31
SCLT1-206ENST00000503565 INPP5AQ14642 412 aa6.84□□□□□ -1.31
SCLT1-206ENST00000503565 ARSHQ5FYA8 562 aa6.84□□□□□ -1.31
SCLT1-206ENST00000503565 DIEXFQ68CQ4 756 aaKnown RBP6.84□□□□□ -1.31
SCLT1-206ENST00000503565 ANKRD34AQ69YU3 496 aa6.84□□□□□ -1.31
SCLT1-206ENST00000503565 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.84□□□□□ -1.31
SCLT1-206ENST00000503565 FAM20CQ8IXL6 584 aa6.84□□□□□ -1.31
SCLT1-206ENST00000503565 GPBAR1Q8TDU6 330 aa6.84□□□□□ -1.31
SCLT1-206ENST00000503565 THAP3Q8WTV1 239 aaPredicted RBP6.84□□□□□ -1.31
SCLT1-206ENST00000503565 TMEM40Q8WWA1 233 aa6.84□□□□□ -1.31
SCLT1-206ENST00000503565 WDR89Q96FK6 387 aaPredicted RBP6.84□□□□□ -1.31
SCLT1-206ENST00000503565 ZC3H12CQ9C0D7 883 aaKnown RBP6.84□□□□□ -1.31
SCLT1-206ENST00000503565 SLKQ9H2G2 1235 aaPredicted RBP6.84□□□□□ -1.31
SCLT1-206ENST00000503565 KLHL42Q9P2K6 505 aa6.84□□□□□ -1.31
SCLT1-206ENST00000503565 KDM2BQ8NHM5 1336 aa6.83□□□□□ -1.32
SCLT1-206ENST00000503565 DNAJA2O60884 412 aa6.83□□□□□ -1.32
SCLT1-206ENST00000503565 CYP11A1P05108 521 aa6.83□□□□□ -1.32
SCLT1-206ENST00000503565 ACRP10323 421 aa6.83□□□□□ -1.32
SCLT1-206ENST00000503565 GUCY2CP25092 1073 aa6.83□□□□□ -1.32
SCLT1-206ENST00000503565 ZYXQ15942 572 aaKnown RBP6.83□□□□□ -1.32
SCLT1-206ENST00000503565 WIPI1Q5MNZ9 446 aaPredicted RBP6.83□□□□□ -1.32
SCLT1-206ENST00000503565 NUTM2GQ5VZR2 741 aa6.83□□□□□ -1.32
SCLT1-206ENST00000503565 LRFN4Q6PJG9 635 aa6.83□□□□□ -1.32
SCLT1-206ENST00000503565 C2CD4AQ8NCU7 369 aaPredicted RBP6.83□□□□□ -1.32
SCLT1-206ENST00000503565 DDX54Q8TDD1 881 aaKnown RBP6.83□□□□□ -1.32
SCLT1-206ENST00000503565 PLPPR2Q96GM1 343 aa6.83□□□□□ -1.32
SCLT1-206ENST00000503565 TM9SF2Q99805 663 aa6.83□□□□□ -1.32
SCLT1-206ENST00000503565 CHMP4AQ9BY43 222 aa6.83□□□□□ -1.32
SCLT1-206ENST00000503565 CCDC86Q9H6F5 360 aaKnown RBP6.83□□□□□ -1.32
SCLT1-206ENST00000503565 ZMYM5Q9UJ78 669 aa6.83□□□□□ -1.32
SCLT1-206ENST00000503565 PCDHA4Q9UN74 947 aa6.83□□□□□ -1.32
SCLT1-206ENST00000503565 RAXQ9Y2V3 346 aa6.83□□□□□ -1.32
SCLT1-206ENST00000503565 PTCH2Q9Y6C5 1203 aa6.83□□□□□ -1.32
SCLT1-206ENST00000503565 PPP1R12AO14974 1030 aaPredicted RBP6.82□□□□□ -1.32
SCLT1-206ENST00000503565 ZNF862O60290 1169 aa6.82□□□□□ -1.32
SCLT1-206ENST00000503565 UVSSAQ2YD98 709 aa6.82□□□□□ -1.32
SCLT1-206ENST00000503565 LRRFIP1Q32MZ4 808 aaKnown RBP6.82□□□□□ -1.32
SCLT1-206ENST00000503565 SGO2Q562F6 1265 aa6.82□□□□□ -1.32
SCLT1-206ENST00000503565 TAB3Q8N5C8 712 aaPredicted RBP6.82□□□□□ -1.32
SCLT1-206ENST00000503565 C12orf50Q8NA57 414 aaPredicted RBP6.82□□□□□ -1.32
SCLT1-206ENST00000503565 ST13P5Q8NFI4 369 aaPredicted RBP6.82□□□□□ -1.32
SCLT1-206ENST00000503565 UTP4Q969X6 686 aaKnown RBP6.82□□□□□ -1.32
SCLT1-206ENST00000503565 FEZ1Q99689 392 aa6.82□□□□□ -1.32
SCLT1-206ENST00000503565 LTBP3Q9NS15 1303 aa6.81□□□□□ -1.32
SCLT1-206ENST00000503565 HMX2A2RU54 273 aa6.81□□□□□ -1.32
SCLT1-206ENST00000503565 BMP3P12645 472 aa6.81□□□□□ -1.32
SCLT1-206ENST00000503565 FSTP19883 344 aa6.81□□□□□ -1.32
SCLT1-206ENST00000503565 MASP1P48740 699 aa6.81□□□□□ -1.32
SCLT1-206ENST00000503565 SOX4Q06945 474 aaPredicted RBP6.81□□□□□ -1.32
SCLT1-206ENST00000503565 SSRP1Q08945 709 aaKnown RBP6.81□□□□□ -1.32
SCLT1-206ENST00000503565 OVOS1Q6IE37 1185 aa6.81□□□□□ -1.32
SCLT1-206ENST00000503565 CDPF1Q6NVV7 123 aa6.81□□□□□ -1.32
SCLT1-206ENST00000503565 FDX2Q6P4F2 183 aa6.81□□□□□ -1.32
SCLT1-206ENST00000503565 STAG1Q8WVM7 1258 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms