RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	GGA3	Q9NZ52	723 aa		13.43	□□□□□ -0.26
BRCA1-222	ENST00000493919	PCDHAC2	Q9Y5I4	1007 aa		13.43	□□□□□ -0.26
BRCA1-222	ENST00000493919	MAST3	O60307	1309 aa		13.43	□□□□□ -0.26
BRCA1-222	ENST00000493919	ASTN2	O75129	1339 aa	Predicted RBP	13.43	□□□□□ -0.26
BRCA1-222	ENST00000493919	SALL1	Q9NSC2	1324 aa		13.43	□□□□□ -0.26
BRCA1-222	ENST00000493919	ZAP70	P43403	619 aa		13.43	□□□□□ -0.26
BRCA1-222	ENST00000493919	DLGAP5	Q15398	846 aa		13.43	□□□□□ -0.26
BRCA1-222	ENST00000493919	CFAP100	Q494V2	611 aa		13.43	□□□□□ -0.26
BRCA1-222	ENST00000493919	TSHZ3	Q63HK5	1081 aa		13.43	□□□□□ -0.26
BRCA1-222	ENST00000493919	CHADL	Q6NUI6	762 aa		13.43	□□□□□ -0.26
BRCA1-222	ENST00000493919	DZIP1	Q86YF9	867 aa	Known RBP	13.43	□□□□□ -0.26
BRCA1-222	ENST00000493919	WNT10B	O00744	389 aa		13.42	□□□□□ -0.26
BRCA1-222	ENST00000493919	CRK	P46108	304 aa		13.42	□□□□□ -0.26
BRCA1-222	ENST00000493919	DIXDC1	Q155Q3	683 aa		13.42	□□□□□ -0.26
BRCA1-222	ENST00000493919	MUM1L1	Q5H9M0	696 aa		13.42	□□□□□ -0.26
BRCA1-222	ENST00000493919	SUGP1	Q8IWZ8	645 aa	Known RBP	13.42	□□□□□ -0.26
BRCA1-222	ENST00000493919	GPATCH3	Q96I76	525 aa		13.42	□□□□□ -0.26
BRCA1-222	ENST00000493919	LNPK	Q9C0E8	428 aa		13.42	□□□□□ -0.26
BRCA1-222	ENST00000493919	ARHGEF10L	Q9HCE6	1279 aa		13.42	□□□□□ -0.26
BRCA1-222	ENST00000493919	ANGEL2	Q5VTE6	544 aa	Known RBP	13.41	□□□□□ -0.26
BRCA1-222	ENST00000493919	SMC5	Q8IY18	1101 aa		13.41	□□□□□ -0.26
BRCA1-222	ENST00000493919	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.41	□□□□□ -0.26
BRCA1-222	ENST00000493919	TEKT1	Q969V4	418 aa		13.41	□□□□□ -0.26
BRCA1-222	ENST00000493919	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.41	□□□□□ -0.26
BRCA1-222	ENST00000493919	LZTS2	Q9BRK4	669 aa		13.41	□□□□□ -0.26
BRCA1-222	ENST00000493919	LRP2BP	Q9P2M1	347 aa		13.41	□□□□□ -0.26
BRCA1-222	ENST00000493919	MAST2	Q6P0Q8	1798 aa		13.41	□□□□□ -0.26
BRCA1-222	ENST00000493919	CEP350	Q5VT06	3117 aa		13.41	□□□□□ -0.26
BRCA1-222	ENST00000493919	ADCY2	Q08462	1091 aa		13.41	□□□□□ -0.26
BRCA1-222	ENST00000493919	ZFYVE27	Q5T4F4	411 aa		13.41	□□□□□ -0.26
BRCA1-222	ENST00000493919	MAMSTR	Q6ZN01	415 aa		13.41	□□□□□ -0.26
BRCA1-222	ENST00000493919	BOLA2	Q9H3K6	86 aa		13.41	□□□□□ -0.26
BRCA1-222	ENST00000493919	SERPINA10	Q9UK55	444 aa		13.41	□□□□□ -0.26
BRCA1-222	ENST00000493919	SCAF8	Q9UPN6	1271 aa	Known RBP	13.41	□□□□□ -0.26
BRCA1-222	ENST00000493919	ECM29	Q5VYK3	1845 aa		13.41	□□□□□ -0.26
BRCA1-222	ENST00000493919	CLRN2	A0PK11	232 aa		13.4	□□□□□ -0.26
BRCA1-222	ENST00000493919	SPDYE2B	A6NHP3	402 aa		13.4	□□□□□ -0.26
BRCA1-222	ENST00000493919	RIOK3	O14730	519 aa	Known RBP	13.4	□□□□□ -0.26
BRCA1-222	ENST00000493919	MYO1B	O43795	1136 aa		13.4	□□□□□ -0.26
BRCA1-222	ENST00000493919	CYP2E1	P05181	493 aa	Predicted RBP	13.4	□□□□□ -0.26
BRCA1-222	ENST00000493919	SPDYE6	P0CI01	402 aa		13.4	□□□□□ -0.26
BRCA1-222	ENST00000493919	DCPS	Q96C86	337 aa	Known RBP	13.4	□□□□□ -0.26
BRCA1-222	ENST00000493919	AGAP3	Q96P47	875 aa		13.4	□□□□□ -0.26
BRCA1-222	ENST00000493919	IRF2BPL	Q9H1B7	796 aa		13.4	□□□□□ -0.26
BRCA1-222	ENST00000493919	ECHDC1	Q9NTX5	307 aa		13.4	□□□□□ -0.26
BRCA1-222	ENST00000493919	ZNF232	Q9UNY5	417 aa		13.4	□□□□□ -0.26
BRCA1-222	ENST00000493919	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.4	□□□□□ -0.26
BRCA1-222	ENST00000493919	KIN	O60870	393 aa	Known RBP	13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	CAND2	O75155	1236 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	IDH1	O75874	414 aa	Known RBP	13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	REC8	O95072	547 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	KIF4A	O95239	1232 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	INHBE	P58166	350 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	FSTL1	Q12841	308 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	RASA3	Q14644	834 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	WWC2	Q6AWC2	1192 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	CNTROB	Q8N137	903 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	ZC3H15	Q8WU90	426 aa	Known RBP	13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	TATDN2	Q93075	761 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	SPATA32	Q96LK8	384 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	TRAIP	Q9BWF2	469 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	C22orf23	Q9BZE7	217 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	ANTXR1	Q9H6X2	564 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	VEZT	Q9HBM0	779 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	PIH1D3	Q9NQM4	214 aa	Known RBP	13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	IRAK4	Q9NWZ3	460 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	AOX1	Q06278	1338 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	MYH2	Q9UKX2	1941 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	ADM5	C9JUS6	153 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	IPO5	O00410	1097 aa	Known RBP	13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	FAM163B	P0C2L3	166 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	ATP5J	P18859	108 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	MX1	P20591	662 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	MAP2K2	P36507	400 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	C1QTNF8	P60827	252 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	MECOM	Q03112	1051 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	BMS1	Q14692	1282 aa	Known RBP	13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	KLHL10	Q6JEL2	608 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	KRT26	Q7Z3Y9	468 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	SULF1	Q8IWU6	871 aa		13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	EDC3	Q96F86	508 aa	Known RBP	13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	PRMT6	Q96LA8	375 aa	Predicted RBP	13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	MMTAG2	Q9BU76	263 aa	Known RBP	13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	GZF1	Q9H116	711 aa	Predicted RBP	13.39	□□□□□ -0.27
BRCA1-222	ENST00000493919	DOCK2	Q92608	1830 aa		13.38	□□□□□ -0.27
BRCA1-222	ENST00000493919	TRAF5	O00463	557 aa		13.38	□□□□□ -0.27
BRCA1-222	ENST00000493919	AP1AR	Q63HQ0	302 aa		13.38	□□□□□ -0.27
BRCA1-222	ENST00000493919	CHD1L	Q86WJ1	897 aa		13.38	□□□□□ -0.27
BRCA1-222	ENST00000493919	ANKRD20A12P	Q8NF67	263 aa		13.38	□□□□□ -0.27
BRCA1-222	ENST00000493919	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.38	□□□□□ -0.27
BRCA1-222	ENST00000493919	CEP89	Q96ST8	783 aa		13.38	□□□□□ -0.27
BRCA1-222	ENST00000493919	UTP6	Q9NYH9	597 aa	Known RBP	13.38	□□□□□ -0.27
BRCA1-222	ENST00000493919	DAGLA	Q9Y4D2	1042 aa		13.38	□□□□□ -0.27
BRCA1-222	ENST00000493919	HDLBP	Q00341	1268 aa	Known RBP	13.37	□□□□□ -0.27
BRCA1-222	ENST00000493919	NUCB1	Q02818	461 aa		13.37	□□□□□ -0.27
BRCA1-222	ENST00000493919	NOM1	Q5C9Z4	860 aa	Known RBP	13.37	□□□□□ -0.27
BRCA1-222	ENST00000493919	TRIM74	Q86UV6	250 aa		13.37	□□□□□ -0.27
BRCA1-222	ENST00000493919	TRIM73	Q86UV7	250 aa		13.37	□□□□□ -0.27
BRCA1-222	ENST00000493919	MTMR14	Q8NCE2	650 aa		13.37	□□□□□ -0.27

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