RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 ASCC2Q9H1I8 757 aaPredicted RBP21.47■■□□□ 1.03
MCF2L-226ENST00000486210 SMARCA5O60264 1052 aaPredicted RBP21.46■■□□□ 1.03
MCF2L-226ENST00000486210 RAB11FIP3O75154 756 aa21.46■■□□□ 1.03
MCF2L-226ENST00000486210 SYN1P17600 705 aa21.46■■□□□ 1.03
MCF2L-226ENST00000486210 CAP2P40123 477 aa21.46■■□□□ 1.03
MCF2L-226ENST00000486210 SH3D19Q5HYK7 790 aa21.46■■□□□ 1.03
MCF2L-226ENST00000486210 TRIB2Q92519 343 aa21.46■■□□□ 1.03
MCF2L-226ENST00000486210 NEUROD6Q96NK8 337 aa21.46■■□□□ 1.03
MCF2L-226ENST00000486210 HMX1Q9NP08 348 aaPredicted RBP21.46■■□□□ 1.03
MCF2L-226ENST00000486210 IL1RAPL2Q9NP60 686 aa21.46■■□□□ 1.03
MCF2L-226ENST00000486210 ERICH6BQ5W0A0 696 aa21.45■■□□□ 1.02
MCF2L-226ENST00000486210 GPR153Q6NV75 609 aa21.45■■□□□ 1.02
MCF2L-226ENST00000486210 PI16Q6UXB8 463 aa21.45■■□□□ 1.02
MCF2L-226ENST00000486210 Q7L0L9 218 aa21.45■■□□□ 1.02
MCF2L-226ENST00000486210 ERC1Q8IUD2 1116 aa21.45■■□□□ 1.02
MCF2L-226ENST00000486210 NSUN4Q96CB9 384 aaKnown RBP21.45■■□□□ 1.02
MCF2L-226ENST00000486210 NBPF3Q9H094 633 aa21.45■■□□□ 1.02
MCF2L-226ENST00000486210 C11orf49Q9H6J7 331 aa21.45■■□□□ 1.02
MCF2L-226ENST00000486210 OGDHLQ9ULD0 1010 aa21.45■■□□□ 1.02
MCF2L-226ENST00000486210 CDK5RAP2Q96SN8 1893 aa21.44■■□□□ 1.02
MCF2L-226ENST00000486210 PEX10O60683 326 aa21.44■■□□□ 1.02
MCF2L-226ENST00000486210 MAGEA10P43363 369 aaPredicted RBP21.44■■□□□ 1.02
MCF2L-226ENST00000486210 KIF1BPQ96EK5 621 aa21.44■■□□□ 1.02
MCF2L-226ENST00000486210 TBC1D2Q9BYX2 928 aa21.44■■□□□ 1.02
MCF2L-226ENST00000486210 HMG20BQ9P0W2 317 aa21.44■■□□□ 1.02
MCF2L-226ENST00000486210 MORF4L1Q9UBU8 362 aa21.44■■□□□ 1.02
MCF2L-226ENST00000486210 PFASO15067 1338 aa21.44■■□□□ 1.02
MCF2L-226ENST00000486210 USP17L5A8MUK1 530 aa21.43■■□□□ 1.02
MCF2L-226ENST00000486210 PABPC4Q13310 644 aaKnown RBP eCLIP21.43■■□□□ 1.02
MCF2L-226ENST00000486210 LRIT3Q3SXY7 679 aa21.43■■□□□ 1.02
MCF2L-226ENST00000486210 TNNI3KQ59H18 835 aa21.43■■□□□ 1.02
MCF2L-226ENST00000486210 MAP3K21Q5TCX8 1036 aa21.43■■□□□ 1.02
MCF2L-226ENST00000486210 TBC1D9Q6ZT07 1266 aa21.43■■□□□ 1.02
MCF2L-226ENST00000486210 SMC5Q8IY18 1101 aa21.43■■□□□ 1.02
MCF2L-226ENST00000486210 DEFB123Q8N688 67 aa21.43■■□□□ 1.02
MCF2L-226ENST00000486210 BCL11AQ9H165 835 aa21.43■■□□□ 1.02
MCF2L-226ENST00000486210 FPGT-TNNI3KV9GXZ4 949 aa21.43■■□□□ 1.02
MCF2L-226ENST00000486210 CYP2B6P20813 491 aa21.42■■□□□ 1.02
MCF2L-226ENST00000486210 GSTO1P78417 241 aa21.42■■□□□ 1.02
MCF2L-226ENST00000486210 B4GALNT3Q6L9W6 998 aa21.42■■□□□ 1.02
MCF2L-226ENST00000486210 EAF2Q96CJ1 260 aaPredicted RBP21.42■■□□□ 1.02
MCF2L-226ENST00000486210 LRRCC1Q9C099 1032 aa21.42■■□□□ 1.02
MCF2L-226ENST00000486210 GPR108Q9NPR9 543 aa21.42■■□□□ 1.02
MCF2L-226ENST00000486210 FOCADQ5VW36 1801 aa21.41■■□□□ 1.02
MCF2L-226ENST00000486210 MAP4K4O95819 1239 aaPredicted RBP21.41■■□□□ 1.02
MCF2L-226ENST00000486210 LDHCP07864 332 aa21.41■■□□□ 1.02
MCF2L-226ENST00000486210 JAG1P78504 1218 aa21.41■■□□□ 1.02
MCF2L-226ENST00000486210 TDHQ8IZJ6 230 aa21.41■■□□□ 1.02
MCF2L-226ENST00000486210 SPATA5Q8NB90 893 aa21.41■■□□□ 1.02
MCF2L-226ENST00000486210 CCDC8Q9H0W5 538 aaPredicted RBP21.41■■□□□ 1.02
MCF2L-226ENST00000486210 TXNRD2Q9NNW7 524 aa21.41■■□□□ 1.02
MCF2L-226ENST00000486210 PPP4R2Q9NY27 417 aa21.41■■□□□ 1.02
MCF2L-226ENST00000486210 FRMPD3Q5JV73 1810 aa21.41■■□□□ 1.02
MCF2L-226ENST00000486210 MTMR2Q13614 643 aa21.4■■□□□ 1.02
MCF2L-226ENST00000486210 ANKRD45Q5TZF3 282 aa21.4■■□□□ 1.02
MCF2L-226ENST00000486210 CCDC136Q96JN2 1154 aa21.4■■□□□ 1.02
MCF2L-226ENST00000486210 P2RX7Q99572 595 aaKnown RBP21.4■■□□□ 1.02
MCF2L-226ENST00000486210 AS3MTQ9HBK9 375 aa21.4■■□□□ 1.02
MCF2L-226ENST00000486210 TLR7Q9NYK1 1049 aaKnown RBP21.4■■□□□ 1.02
MCF2L-226ENST00000486210 UQCRFS1P1P0C7P4 283 aa21.39■■□□□ 1.01
MCF2L-226ENST00000486210 PRKAR2AP13861 404 aaKnown RBP21.39■■□□□ 1.01
MCF2L-226ENST00000486210 HOXA7P31268 230 aaPredicted RBP21.39■■□□□ 1.01
MCF2L-226ENST00000486210 SHROOM1Q2M3G4 852 aaPredicted RBP21.39■■□□□ 1.01
MCF2L-226ENST00000486210 AACSQ86V21 672 aa21.39■■□□□ 1.01
MCF2L-226ENST00000486210 TEX11Q8IYF3 940 aa21.39■■□□□ 1.01
MCF2L-226ENST00000486210 SH3RF3Q8TEJ3 882 aaPredicted RBP21.39■■□□□ 1.01
MCF2L-226ENST00000486210 DBNDD2Q9BQY9 259 aa21.39■■□□□ 1.01
MCF2L-226ENST00000486210 WDR18Q9BV38 432 aa21.39■■□□□ 1.01
MCF2L-226ENST00000486210 DNAJC18Q9H819 358 aa21.39■■□□□ 1.01
MCF2L-226ENST00000486210 MTMR10Q9NXD2 777 aa21.39■■□□□ 1.01
MCF2L-226ENST00000486210 HERC5Q9UII4 1024 aaKnown RBP21.39■■□□□ 1.01
MCF2L-226ENST00000486210 MAST2Q6P0Q8 1798 aa21.38■■□□□ 1.01
MCF2L-226ENST00000486210 COL6A1P12109 1028 aa21.38■■□□□ 1.01
MCF2L-226ENST00000486210 ARID4AP29374 1257 aaPredicted RBP21.38■■□□□ 1.01
MCF2L-226ENST00000486210 BACE1P56817 501 aa21.38■■□□□ 1.01
MCF2L-226ENST00000486210 CLASRPQ8N2M8 674 aaKnown RBP21.38■■□□□ 1.01
MCF2L-226ENST00000486210 NOL10Q9BSC4 688 aaKnown RBP21.38■■□□□ 1.01
MCF2L-226ENST00000486210 RAI14Q9P0K7 980 aa21.38■■□□□ 1.01
MCF2L-226ENST00000486210 STXBP5LQ9Y2K9 1186 aa21.38■■□□□ 1.01
MCF2L-226ENST00000486210 MYO5AQ9Y4I1 1855 aaKnown RBP21.38■■□□□ 1.01
MCF2L-226ENST00000486210 A0A0C4DFX4 3053 aa21.37■■□□□ 1.01
MCF2L-226ENST00000486210 XRCC5P13010 732 aaKnown RBP21.37■■□□□ 1.01
MCF2L-226ENST00000486210 MCAMP43121 646 aa21.37■■□□□ 1.01
MCF2L-226ENST00000486210 HERVK_113P62684 666 aa21.37■■□□□ 1.01
MCF2L-226ENST00000486210 IRX3P78415 501 aaPredicted RBP21.37■■□□□ 1.01
MCF2L-226ENST00000486210 CACNB2Q08289 660 aaPredicted RBP21.37■■□□□ 1.01
MCF2L-226ENST00000486210 Q3C1V9 767 aa21.37■■□□□ 1.01
MCF2L-226ENST00000486210 POTEEQ6S8J3 1075 aa21.37■■□□□ 1.01
MCF2L-226ENST00000486210 USP6NLQ92738 828 aa21.37■■□□□ 1.01
MCF2L-226ENST00000486210 NUDT12Q9BQG2 462 aa21.37■■□□□ 1.01
MCF2L-226ENST00000486210 RBPJLQ9UBG7 517 aa21.37■■□□□ 1.01
MCF2L-226ENST00000486210 DBNLQ9UJU6 430 aaKnown RBP21.37■■□□□ 1.01
MCF2L-226ENST00000486210 LHX8Q68G74 356 aa21.36■■□□□ 1.01
MCF2L-226ENST00000486210 GPRC5AQ8NFJ5 357 aa21.36■■□□□ 1.01
MCF2L-226ENST00000486210 SOCS4Q8WXH5 440 aa21.36■■□□□ 1.01
MCF2L-226ENST00000486210 UBE2OQ9C0C9 1292 aaKnown RBP21.36■■□□□ 1.01
MCF2L-226ENST00000486210 LRP2BPQ9P2M1 347 aa21.36■■□□□ 1.01
MCF2L-226ENST00000486210 PI4KBQ9UBF8 816 aa21.36■■□□□ 1.01
MCF2L-226ENST00000486210 CCND3P30281 292 aaPredicted RBP21.35■■□□□ 1.01
MCF2L-226ENST00000486210 NUCB1Q02818 461 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms