RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 FLAD1Q8NFF5 587 aa4.87□□□□□ -1.63
XRN1-209ENST00000472625 PIK3R5Q8WYR1 880 aa4.87□□□□□ -1.63
XRN1-209ENST00000472625 TP53INP1Q96A56 240 aa4.87□□□□□ -1.63
XRN1-209ENST00000472625 ELP3Q9H9T3 547 aa4.87□□□□□ -1.63
XRN1-209ENST00000472625 TFCP2L1Q9NZI6 479 aa4.87□□□□□ -1.63
XRN1-209ENST00000472625 SALL4Q9UJQ4 1053 aa4.87□□□□□ -1.63
XRN1-209ENST00000472625 A0A1W2PP64 1363 aa4.87□□□□□ -1.63
XRN1-209ENST00000472625 USP47Q96K76 1375 aa4.87□□□□□ -1.63
XRN1-209ENST00000472625 PLEKHG2Q9H7P9 1386 aa4.87□□□□□ -1.63
XRN1-209ENST00000472625 SCO2A0A1W2PP80 73 aa4.86□□□□□ -1.63
XRN1-209ENST00000472625 H3BRB1 525 aa4.86□□□□□ -1.63
XRN1-209ENST00000472625 DEAF1O75398 565 aaPredicted RBP4.86□□□□□ -1.63
XRN1-209ENST00000472625 ARID4AP29374 1257 aaPredicted RBP4.86□□□□□ -1.63
XRN1-209ENST00000472625 AMPHP49418 695 aa4.86□□□□□ -1.63
XRN1-209ENST00000472625 GPR162Q16538 588 aa4.86□□□□□ -1.63
XRN1-209ENST00000472625 PRSS36Q5K4E3 855 aa4.86□□□□□ -1.63
XRN1-209ENST00000472625 RAPGEF4Q8WZA2 1011 aa4.86□□□□□ -1.63
XRN1-209ENST00000472625 IP6K1Q92551 441 aa4.86□□□□□ -1.63
XRN1-209ENST00000472625 PLD4Q96BZ4 506 aa4.86□□□□□ -1.63
XRN1-209ENST00000472625 LENG1Q96BZ8 264 aaPredicted RBP4.86□□□□□ -1.63
XRN1-209ENST00000472625 FAM129BQ96TA1 746 aa4.86□□□□□ -1.63
XRN1-209ENST00000472625 TUT1Q9H6E5 874 aaKnown RBP4.86□□□□□ -1.63
XRN1-209ENST00000472625 ABI2Q9NYB9 513 aaPredicted RBP4.86□□□□□ -1.63
XRN1-209ENST00000472625 FOXD3Q9UJU5 478 aaPredicted RBP4.86□□□□□ -1.63
XRN1-209ENST00000472625 PCDH11XQ9BZA7 1347 aa4.86□□□□□ -1.63
XRN1-209ENST00000472625 PCDH11YQ9BZA8 1340 aa4.86□□□□□ -1.63
XRN1-209ENST00000472625 SBF2Q86WG5 1849 aa4.86□□□□□ -1.63
XRN1-209ENST00000472625 SOWAHDA6NJG2 315 aa4.85□□□□□ -1.63
XRN1-209ENST00000472625 TNFRSF21O75509 655 aa4.85□□□□□ -1.63
XRN1-209ENST00000472625 FAM13AO94988 1023 aa4.85□□□□□ -1.63
XRN1-209ENST00000472625 ABL1P00519 1130 aa4.85□□□□□ -1.63
XRN1-209ENST00000472625 PSAPP07602 524 aa4.85□□□□□ -1.63
XRN1-209ENST00000472625 IREB2P48200 963 aaKnown RBP4.85□□□□□ -1.63
XRN1-209ENST00000472625 PEAR1Q5VY43 1037 aaPredicted RBP4.85□□□□□ -1.63
XRN1-209ENST00000472625 NME9Q86XW9 330 aa4.85□□□□□ -1.63
XRN1-209ENST00000472625 SYTL4Q96C24 671 aaPredicted RBP4.85□□□□□ -1.63
XRN1-209ENST00000472625 ACSBG1Q96GR2 724 aa4.85□□□□□ -1.63
XRN1-209ENST00000472625 HHIPQ96QV1 700 aa4.85□□□□□ -1.63
XRN1-209ENST00000472625 KRTAP9-9Q9BYP9 154 aa4.85□□□□□ -1.63
XRN1-209ENST00000472625 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
XRN1-209ENST00000472625 TRIM33Q9UPN9 1127 aa4.85□□□□□ -1.63
XRN1-209ENST00000472625 FLT4P35916 1363 aa4.85□□□□□ -1.63
XRN1-209ENST00000472625 CD163L1Q9NR16 1453 aa4.85□□□□□ -1.63
XRN1-209ENST00000472625 CEP350Q5VT06 3117 aa4.84□□□□□ -1.63
XRN1-209ENST00000472625 QSER1Q2KHR3 1735 aa4.84□□□□□ -1.63
XRN1-209ENST00000472625 NSD2O96028 1365 aa4.84□□□□□ -1.63
XRN1-209ENST00000472625 ALX3O95076 343 aa4.84□□□□□ -1.63
XRN1-209ENST00000472625 BRD1O95696 1058 aa4.84□□□□□ -1.63
XRN1-209ENST00000472625 GHRHP01286 108 aa4.84□□□□□ -1.63
XRN1-209ENST00000472625 NOS3P29474 1203 aa4.84□□□□□ -1.63
XRN1-209ENST00000472625 C1QTNF8P60827 252 aa4.84□□□□□ -1.63
XRN1-209ENST00000472625 TMF1P82094 1093 aa4.84□□□□□ -1.63
XRN1-209ENST00000472625 PCSK7Q16549 785 aa4.84□□□□□ -1.63
XRN1-209ENST00000472625 FBXO11Q86XK2 927 aa4.84□□□□□ -1.63
XRN1-209ENST00000472625 ZCRB1Q8TBF4 217 aaKnown RBP4.84□□□□□ -1.63
XRN1-209ENST00000472625 DDX54Q8TDD1 881 aaKnown RBP4.84□□□□□ -1.63
XRN1-209ENST00000472625 SMARCC1Q92922 1105 aaPredicted RBP4.84□□□□□ -1.63
XRN1-209ENST00000472625 MEGF10Q96KG7 1140 aa4.84□□□□□ -1.63
XRN1-209ENST00000472625 TRAIPQ9BWF2 469 aa4.84□□□□□ -1.63
XRN1-209ENST00000472625 RASSF4Q9H2L5 321 aa4.84□□□□□ -1.63
XRN1-209ENST00000472625 FAM13BQ9NYF5 915 aa4.84□□□□□ -1.63
XRN1-209ENST00000472625 KANSL3Q9P2N6 904 aa4.84□□□□□ -1.63
XRN1-209ENST00000472625 CCNL1Q9UK58 526 aaPredicted RBP4.84□□□□□ -1.63
XRN1-209ENST00000472625 LTN1O94822 1766 aa4.83□□□□□ -1.64
XRN1-209ENST00000472625 INSRP06213 1382 aa4.83□□□□□ -1.64
XRN1-209ENST00000472625 MAP3K19Q56UN5 1328 aa4.83□□□□□ -1.64
XRN1-209ENST00000472625 PNPLA7Q6ZV29 1317 aa4.83□□□□□ -1.64
XRN1-209ENST00000472625 KRTAP4-8A0A0G2JLE6 195 aa4.83□□□□□ -1.64
XRN1-209ENST00000472625 EREGO14944 169 aa4.83□□□□□ -1.64
XRN1-209ENST00000472625 GPR182O15218 404 aa4.83□□□□□ -1.64
XRN1-209ENST00000472625 TRPA1O75762 1119 aa4.83□□□□□ -1.64
XRN1-209ENST00000472625 CDC25BP30305 580 aa4.83□□□□□ -1.64
XRN1-209ENST00000472625 HOXC9P31274 260 aa4.83□□□□□ -1.64
XRN1-209ENST00000472625 ZNF827Q17R98 1081 aa4.83□□□□□ -1.64
XRN1-209ENST00000472625 TXNDC11Q6PKC3 985 aa4.83□□□□□ -1.64
XRN1-209ENST00000472625 ZNF438Q7Z4V0 828 aa4.83□□□□□ -1.64
XRN1-209ENST00000472625 IL22RA1Q8N6P7 574 aa4.83□□□□□ -1.64
XRN1-209ENST00000472625 WFDC12Q8WWY7 111 aa4.83□□□□□ -1.64
XRN1-209ENST00000472625 SSBP4Q9BWG4 385 aaPredicted RBP4.83□□□□□ -1.64
XRN1-209ENST00000472625 CD2APQ9Y5K6 639 aa4.83□□□□□ -1.64
XRN1-209ENST00000472625 BTAF1O14981 1849 aa4.83□□□□□ -1.64
XRN1-209ENST00000472625 MEGF6O75095 1541 aa4.82□□□□□ -1.64
XRN1-209ENST00000472625 PALLDQ8WX93 1383 aa4.82□□□□□ -1.64
XRN1-209ENST00000472625 SETDB1Q15047 1291 aa4.82□□□□□ -1.64
XRN1-209ENST00000472625 USPL1Q5W0Q7 1092 aa4.82□□□□□ -1.64
XRN1-209ENST00000472625 ALKBH2Q6NS38 261 aa4.82□□□□□ -1.64
XRN1-209ENST00000472625 PTF1AQ7RTS3 328 aa4.82□□□□□ -1.64
XRN1-209ENST00000472625 AGGF1Q8N302 714 aaeCLIP4.82□□□□□ -1.64
XRN1-209ENST00000472625 LTV1Q96GA3 475 aaPredicted RBP4.82□□□□□ -1.64
XRN1-209ENST00000472625 POP1Q99575 1024 aaKnown RBP4.82□□□□□ -1.64
XRN1-209ENST00000472625 KRTAP4-12Q9BQ66 201 aa4.82□□□□□ -1.64
XRN1-209ENST00000472625 PDGFDQ9GZP0 370 aaPredicted RBP4.82□□□□□ -1.64
XRN1-209ENST00000472625 LACRTQ9GZZ8 138 aa4.82□□□□□ -1.64
XRN1-209ENST00000472625 SLC12A5Q9H2X9 1139 aa4.82□□□□□ -1.64
XRN1-209ENST00000472625 LATS2Q9NRM7 1088 aa4.82□□□□□ -1.64
XRN1-209ENST00000472625 DZANK1Q9NVP4 752 aa4.82□□□□□ -1.64
XRN1-209ENST00000472625 FNDC3AQ9Y2H6 1198 aaKnown RBP4.82□□□□□ -1.64
XRN1-209ENST00000472625 DLL1O00548 723 aa4.81□□□□□ -1.64
XRN1-209ENST00000472625 B4GALNT3Q6L9W6 998 aa4.81□□□□□ -1.64
XRN1-209ENST00000472625 DTWD1Q8N5C7 304 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms