RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 AKAP11Q9UKA4 1901 aa13.8□□□□□ -0.2
VARS2-205ENST00000469358 IFNAR1P17181 557 aa13.8□□□□□ -0.2
VARS2-205ENST00000469358 OAS2P29728 719 aaKnown RBP13.8□□□□□ -0.2
VARS2-205ENST00000469358 WTAPQ15007 396 aa13.8□□□□□ -0.2
VARS2-205ENST00000469358 WWC2Q6AWC2 1192 aa13.8□□□□□ -0.2
VARS2-205ENST00000469358 CCP110O43303 1012 aa13.8□□□□□ -0.2
VARS2-205ENST00000469358 CCT6AP40227 531 aaKnown RBP13.8□□□□□ -0.2
VARS2-205ENST00000469358 EVA1CP58658 441 aa13.8□□□□□ -0.2
VARS2-205ENST00000469358 TTF1Q15361 905 aaPredicted RBP13.8□□□□□ -0.2
VARS2-205ENST00000469358 ADGRA1Q86SQ6 560 aa13.8□□□□□ -0.2
VARS2-205ENST00000469358 BLZF1Q9H2G9 400 aa13.8□□□□□ -0.2
VARS2-205ENST00000469358 BAZ2BQ9UIF8 2168 aaKnown RBP13.8□□□□□ -0.2
VARS2-205ENST00000469358 CYP2C19P33261 490 aa13.79□□□□□ -0.2
VARS2-205ENST00000469358 SARSP49591 514 aaKnown RBP13.79□□□□□ -0.2
VARS2-205ENST00000469358 DPYDQ12882 1025 aa13.79□□□□□ -0.2
VARS2-205ENST00000469358 TRIM28Q13263 835 aaKnown RBP13.79□□□□□ -0.2
VARS2-205ENST00000469358 CRACR2BQ8N4Y2 399 aaPredicted RBP13.79□□□□□ -0.2
VARS2-205ENST00000469358 LAMB4A4D0S4 1761 aa13.79□□□□□ -0.2
VARS2-205ENST00000469358 TICAM2Q86XR7 235 aa13.79□□□□□ -0.2
VARS2-205ENST00000469358 TRIM22Q8IYM9 498 aa13.79□□□□□ -0.2
VARS2-205ENST00000469358 PLA2G12BQ9BX93 195 aa13.79□□□□□ -0.2
VARS2-205ENST00000469358 MAPK8IP1Q9UQF2 711 aa13.79□□□□□ -0.2
VARS2-205ENST00000469358 STX10O60499 249 aa13.78□□□□□ -0.2
VARS2-205ENST00000469358 NR1I3Q14994 352 aa13.78□□□□□ -0.2
VARS2-205ENST00000469358 ZNF174Q15697 407 aa13.78□□□□□ -0.2
VARS2-205ENST00000469358 ENOX1Q8TC92 643 aaKnown RBP13.78□□□□□ -0.2
VARS2-205ENST00000469358 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.78□□□□□ -0.2
VARS2-205ENST00000469358 RNF225M0QZC1 329 aaPredicted RBP13.78□□□□□ -0.2
VARS2-205ENST00000469358 ADAMTS3O15072 1205 aa13.78□□□□□ -0.2
VARS2-205ENST00000469358 LIFRP42702 1097 aa13.78□□□□□ -0.2
VARS2-205ENST00000469358 SLC4A8Q2Y0W8 1093 aa13.78□□□□□ -0.2
VARS2-205ENST00000469358 IGSF22Q8N9C0 903 aa13.78□□□□□ -0.2
VARS2-205ENST00000469358 ACRBPQ8NEB7 543 aa13.78□□□□□ -0.2
VARS2-205ENST00000469358 MPHOSPH8Q99549 860 aa13.78□□□□□ -0.2
VARS2-205ENST00000469358 SMC1AQ14683 1233 aaKnown RBP13.78□□□□□ -0.2
VARS2-205ENST00000469358 APTXQ7Z2E3 356 aaKnown RBP13.78□□□□□ -0.2
VARS2-205ENST00000469358 ZNF654Q8IZM8 581 aa13.78□□□□□ -0.2
VARS2-205ENST00000469358 FANCBQ8NB91 859 aa13.78□□□□□ -0.2
VARS2-205ENST00000469358 CDC5LQ99459 802 aaKnown RBP13.78□□□□□ -0.2
VARS2-205ENST00000469358 ABCF2Q9UG63 623 aa13.78□□□□□ -0.2
VARS2-205ENST00000469358 FBXO3Q9UK99 471 aa13.78□□□□□ -0.2
VARS2-205ENST00000469358 SPEF2Q9C093 1822 aa13.78□□□□□ -0.2
VARS2-205ENST00000469358 PKD1L3Q7Z443 1732 aa13.77□□□□□ -0.2
VARS2-205ENST00000469358 PLEKHA8P1O95397 391 aa13.77□□□□□ -0.2
VARS2-205ENST00000469358 ARID4AP29374 1257 aaPredicted RBP13.77□□□□□ -0.2
VARS2-205ENST00000469358 CASP14P31944 242 aa13.77□□□□□ -0.2
VARS2-205ENST00000469358 NUTM2AQ8IVF1 878 aaPredicted RBP13.77□□□□□ -0.2
VARS2-205ENST00000469358 MLKLQ8NB16 471 aa13.77□□□□□ -0.2
VARS2-205ENST00000469358 SYMPKQ92797 1274 aaKnown RBP13.77□□□□□ -0.2
VARS2-205ENST00000469358 ADAMTSL3P82987 1691 aa13.77□□□□□ -0.2
VARS2-205ENST00000469358 H3BQF6 201 aa13.77□□□□□ -0.21
VARS2-205ENST00000469358 STARD3NLO95772 234 aa13.77□□□□□ -0.21
VARS2-205ENST00000469358 VEGFAP15692 232 aaPredicted RBP13.77□□□□□ -0.21
VARS2-205ENST00000469358 FXR1P51114 621 aaKnown RBP eCLIP13.77□□□□□ -0.21
VARS2-205ENST00000469358 MAP3K12Q12852 859 aa13.77□□□□□ -0.21
VARS2-205ENST00000469358 NKX1-1Q15270 411 aaPredicted RBP13.77□□□□□ -0.21
VARS2-205ENST00000469358 PUM3Q15397 648 aaKnown RBP13.77□□□□□ -0.21
VARS2-205ENST00000469358 RSRC2Q7L4I2 434 aaKnown RBP13.77□□□□□ -0.21
VARS2-205ENST00000469358 TFR2Q9UP52 801 aa13.77□□□□□ -0.21
VARS2-205ENST00000469358 AKR1B15C9JRZ8 316 aaPredicted RBP13.77□□□□□ -0.21
VARS2-205ENST00000469358 PLCD1P51178 756 aa13.77□□□□□ -0.21
VARS2-205ENST00000469358 MCM6Q14566 821 aa13.77□□□□□ -0.21
VARS2-205ENST00000469358 RILPL1Q5EBL4 403 aa13.77□□□□□ -0.21
VARS2-205ENST00000469358 ZNF569Q5MCW4 686 aa13.77□□□□□ -0.21
VARS2-205ENST00000469358 SRPRBQ9Y5M8 271 aaKnown RBP13.77□□□□□ -0.21
VARS2-205ENST00000469358 V9GY48 417 aaPredicted RBP13.77□□□□□ -0.21
VARS2-205ENST00000469358 LPIN2Q92539 896 aa13.76□□□□□ -0.21
VARS2-205ENST00000469358 EEF2KMTQ96G04 330 aa13.76□□□□□ -0.21
VARS2-205ENST00000469358 SRRTQ9BXP5 876 aaKnown RBP13.76□□□□□ -0.21
VARS2-205ENST00000469358 RNF216Q9NWF9 866 aaPredicted RBP13.76□□□□□ -0.21
VARS2-205ENST00000469358 LRP2BPQ9P2M1 347 aa13.76□□□□□ -0.21
VARS2-205ENST00000469358 ADGRG1Q9Y653 693 aa13.76□□□□□ -0.21
VARS2-205ENST00000469358 RHOXF2BP0C7M4 288 aa13.76□□□□□ -0.21
VARS2-205ENST00000469358 IRX5P78411 483 aaPredicted RBP13.76□□□□□ -0.21
VARS2-205ENST00000469358 BRINP3Q76B58 766 aa13.76□□□□□ -0.21
VARS2-205ENST00000469358 PAGE5Q96GU1 130 aa13.76□□□□□ -0.21
VARS2-205ENST00000469358 PNKPQ96T60 521 aa13.76□□□□□ -0.21
VARS2-205ENST00000469358 RHOXF2Q9BQY4 288 aa13.76□□□□□ -0.21
VARS2-205ENST00000469358 FUT8Q9BYC5 575 aa13.76□□□□□ -0.21
VARS2-205ENST00000469358 HOOK1Q9UJC3 728 aaKnown RBP13.76□□□□□ -0.21
VARS2-205ENST00000469358 ECM29Q5VYK3 1845 aa13.76□□□□□ -0.21
VARS2-205ENST00000469358 CCDC66A2RUB6 948 aa13.76□□□□□ -0.21
VARS2-205ENST00000469358 NT5DC1Q5TFE4 455 aa13.76□□□□□ -0.21
VARS2-205ENST00000469358 FCHSD1Q86WN1 690 aa13.76□□□□□ -0.21
VARS2-205ENST00000469358 UBAC1Q9BSL1 405 aa13.76□□□□□ -0.21
VARS2-205ENST00000469358 VPS16Q9H269 839 aa13.76□□□□□ -0.21
VARS2-205ENST00000469358 FOXP1Q9H334 677 aaPredicted RBP13.76□□□□□ -0.21
VARS2-205ENST00000469358 ARFGAP3Q9NP61 516 aa13.76□□□□□ -0.21
VARS2-205ENST00000469358 CTNND2Q9UQB3 1225 aa13.76□□□□□ -0.21
VARS2-205ENST00000469358 ABCC12Q96J65 1359 aa13.75□□□□□ -0.21
VARS2-205ENST00000469358 TNKSO95271 1327 aa13.75□□□□□ -0.21
VARS2-205ENST00000469358 SYNRGQ9UMZ2 1314 aa13.75□□□□□ -0.21
VARS2-205ENST00000469358 A0A1B0GTH6 734 aa13.75□□□□□ -0.21
VARS2-205ENST00000469358 ERICH2A1L162 156 aa13.75□□□□□ -0.21
VARS2-205ENST00000469358 DEXIO95424 95 aa13.75□□□□□ -0.21
VARS2-205ENST00000469358 CCDC175P0C221 793 aa13.75□□□□□ -0.21
VARS2-205ENST00000469358 FGFR2P21802 821 aa13.75□□□□□ -0.21
VARS2-205ENST00000469358 HSPA2P54652 639 aa13.75□□□□□ -0.21
VARS2-205ENST00000469358 STK36Q9NRP7 1315 aa13.75□□□□□ -0.21
VARS2-205ENST00000469358 VGLL3A8MV65 326 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms