RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 CDC5LQ99459 802 aaKnown RBP9.74□□□□□ -0.85
LSM5-208ENST00000450169 PAGR1Q9BTK6 254 aa9.74□□□□□ -0.85
LSM5-208ENST00000450169 BEGAINQ9BUH8 593 aa9.74□□□□□ -0.85
LSM5-208ENST00000450169 NAA15Q9BXJ9 866 aaKnown RBP9.74□□□□□ -0.85
LSM5-208ENST00000450169 SLC40A1Q9NP59 571 aa9.74□□□□□ -0.85
LSM5-208ENST00000450169 TSPYL4Q9UJ04 414 aa9.74□□□□□ -0.85
LSM5-208ENST00000450169 PXDNLA1KZ92 1463 aa9.74□□□□□ -0.85
LSM5-208ENST00000450169 A0A0D9SFI3 127 aa9.73□□□□□ -0.85
LSM5-208ENST00000450169 TARSL2A2RTX5 802 aaKnown RBP9.73□□□□□ -0.85
LSM5-208ENST00000450169 AKR1B15C9JRZ8 316 aaPredicted RBP9.73□□□□□ -0.85
LSM5-208ENST00000450169 GOLGA8KD6RF30 607 aa9.73□□□□□ -0.85
LSM5-208ENST00000450169 SPTLC2O15270 562 aa9.73□□□□□ -0.85
LSM5-208ENST00000450169 YEATS4O95619 227 aa9.73□□□□□ -0.85
LSM5-208ENST00000450169 MYBL2P10244 700 aa9.73□□□□□ -0.85
LSM5-208ENST00000450169 SSTR3P32745 418 aaPredicted RBP9.73□□□□□ -0.85
LSM5-208ENST00000450169 RWDD2BP57060 319 aa9.73□□□□□ -0.85
LSM5-208ENST00000450169 SLC8A3P57103 927 aa9.73□□□□□ -0.85
LSM5-208ENST00000450169 RCSD1Q6JBY9 416 aa9.73□□□□□ -0.85
LSM5-208ENST00000450169 RASGRP2Q7LDG7 609 aa9.73□□□□□ -0.85
LSM5-208ENST00000450169 KIRREL3Q8IZU9 778 aa9.73□□□□□ -0.85
LSM5-208ENST00000450169 MAGEC3Q8TD91 643 aa9.73□□□□□ -0.85
LSM5-208ENST00000450169 BORCS6Q96GS4 357 aa9.73□□□□□ -0.85
LSM5-208ENST00000450169 TMUB1Q9BVT8 246 aa9.73□□□□□ -0.85
LSM5-208ENST00000450169 KIF9Q9HAQ2 790 aa9.73□□□□□ -0.85
LSM5-208ENST00000450169 CLIC4Q9Y696 253 aa9.73□□□□□ -0.85
LSM5-208ENST00000450169 N4BP2Q86UW6 1770 aaPredicted RBP9.73□□□□□ -0.85
LSM5-208ENST00000450169 MED23Q9ULK4 1368 aa9.73□□□□□ -0.85
LSM5-208ENST00000450169 CTDNEP1O95476 244 aa9.73□□□□□ -0.85
LSM5-208ENST00000450169 PDHBP11177 359 aa9.73□□□□□ -0.85
LSM5-208ENST00000450169 GBP2P32456 591 aaPredicted RBP9.73□□□□□ -0.85
LSM5-208ENST00000450169 AMPD2Q01433 879 aa9.73□□□□□ -0.85
LSM5-208ENST00000450169 SKIV2LQ15477 1246 aaKnown RBP9.73□□□□□ -0.85
LSM5-208ENST00000450169 RNF187Q5TA31 235 aaPredicted RBP9.73□□□□□ -0.85
LSM5-208ENST00000450169 FAM210AQ96ND0 272 aa9.73□□□□□ -0.85
LSM5-208ENST00000450169 TTF2Q9UNY4 1162 aaKnown RBP9.73□□□□□ -0.85
LSM5-208ENST00000450169 ZEB2O60315 1214 aa9.72□□□□□ -0.85
LSM5-208ENST00000450169 CMA1P23946 247 aa9.72□□□□□ -0.85
LSM5-208ENST00000450169 NAP1L1P55209 391 aaKnown RBP9.72□□□□□ -0.85
LSM5-208ENST00000450169 SKOR1P84550 965 aa9.72□□□□□ -0.85
LSM5-208ENST00000450169 PDCLQ13371 301 aa9.72□□□□□ -0.85
LSM5-208ENST00000450169 RBBP5Q15291 538 aaKnown RBP9.72□□□□□ -0.85
LSM5-208ENST00000450169 ZC3H12AQ5D1E8 599 aaKnown RBP9.72□□□□□ -0.85
LSM5-208ENST00000450169 TICAM2Q86XR7 235 aa9.72□□□□□ -0.85
LSM5-208ENST00000450169 SEC62Q99442 399 aaKnown RBP9.72□□□□□ -0.85
LSM5-208ENST00000450169 CPSF2Q9P2I0 782 aaKnown RBP9.72□□□□□ -0.85
LSM5-208ENST00000450169 MYO1AQ9UBC5 1043 aa9.72□□□□□ -0.85
LSM5-208ENST00000450169 JCADQ9P266 1359 aa9.72□□□□□ -0.85
LSM5-208ENST00000450169 NRXN3Q9Y4C0 1643 aa9.72□□□□□ -0.85
LSM5-208ENST00000450169 SBNO1A3KN83 1393 aa9.72□□□□□ -0.85
LSM5-208ENST00000450169 TTC36A6NLP5 189 aa9.72□□□□□ -0.85
LSM5-208ENST00000450169 IPO7O95373 1038 aaKnown RBP9.72□□□□□ -0.85
LSM5-208ENST00000450169 SLC8A1P32418 973 aa9.72□□□□□ -0.85
LSM5-208ENST00000450169 PNOCQ13519 176 aa9.72□□□□□ -0.85
LSM5-208ENST00000450169 SULT6B1Q6IMI4 303 aa9.72□□□□□ -0.85
LSM5-208ENST00000450169 CYB5D1Q6P9G0 228 aa9.72□□□□□ -0.85
LSM5-208ENST00000450169 GSPT2Q8IYD1 628 aaKnown RBP9.72□□□□□ -0.85
LSM5-208ENST00000450169 PIP4P2Q8N4L2 257 aa9.72□□□□□ -0.85
LSM5-208ENST00000450169 MAB21L3Q8N8X9 362 aa9.72□□□□□ -0.85
LSM5-208ENST00000450169 MICAL1Q8TDZ2 1067 aa9.72□□□□□ -0.85
LSM5-208ENST00000450169 SPDL1Q96EA4 605 aa9.72□□□□□ -0.85
LSM5-208ENST00000450169 SCLT1Q96NL6 688 aa9.72□□□□□ -0.85
LSM5-208ENST00000450169 NUCKS1Q9H1E3 243 aaKnown RBP9.72□□□□□ -0.85
LSM5-208ENST00000450169 HOOK1Q9UJC3 728 aaKnown RBP9.72□□□□□ -0.85
LSM5-208ENST00000450169 FAM208AQ9UK61 1670 aaKnown RBP9.72□□□□□ -0.85
LSM5-208ENST00000450169 MROH7-TTC4A0A0A0MT08 1334 aa9.71□□□□□ -0.85
LSM5-208ENST00000450169 SALL1Q9NSC2 1324 aa9.71□□□□□ -0.85
LSM5-208ENST00000450169 GOLGA6L7A0A1B0GV03 622 aa9.71□□□□□ -0.85
LSM5-208ENST00000450169 OPA1O60313 960 aa9.71□□□□□ -0.85
LSM5-208ENST00000450169 AP1G2O75843 785 aa9.71□□□□□ -0.85
LSM5-208ENST00000450169 ALDH1L1O75891 902 aa9.71□□□□□ -0.85
LSM5-208ENST00000450169 PEX19P40855 299 aa9.71□□□□□ -0.85
LSM5-208ENST00000450169 SYKP43405 635 aa9.71□□□□□ -0.85
LSM5-208ENST00000450169 TRAF1Q13077 416 aa9.71□□□□□ -0.85
LSM5-208ENST00000450169 DRP2Q13474 957 aa9.71□□□□□ -0.85
LSM5-208ENST00000450169 RRS1Q15050 365 aaKnown RBP9.71□□□□□ -0.85
LSM5-208ENST00000450169 E2F5Q15329 346 aa9.71□□□□□ -0.85
LSM5-208ENST00000450169 HSP90AB2PQ58FF8 381 aa9.71□□□□□ -0.85
LSM5-208ENST00000450169 NAA35Q5VZE5 725 aa9.71□□□□□ -0.85
LSM5-208ENST00000450169 FAM228AQ86W67 206 aa9.71□□□□□ -0.85
LSM5-208ENST00000450169 PDCD7Q8N8D1 485 aaKnown RBP9.71□□□□□ -0.85
LSM5-208ENST00000450169 PARD3BQ8TEW8 1205 aa9.71□□□□□ -0.85
LSM5-208ENST00000450169 RSRC1Q96IZ7 334 aaKnown RBP9.71□□□□□ -0.85
LSM5-208ENST00000450169 TEX13AQ9BXU3 409 aaPredicted RBP9.71□□□□□ -0.85
LSM5-208ENST00000450169 SNUPNO95149 360 aaKnown RBP9.71□□□□□ -0.86
LSM5-208ENST00000450169 RPSAP08865 295 aaKnown RBP9.71□□□□□ -0.86
LSM5-208ENST00000450169 ZNF18P17022 549 aa9.71□□□□□ -0.86
LSM5-208ENST00000450169 USPL1Q5W0Q7 1092 aa9.71□□□□□ -0.86
LSM5-208ENST00000450169 CCNI2Q6ZMN8 369 aaPredicted RBP9.71□□□□□ -0.86
LSM5-208ENST00000450169 KIAA1328Q86T90 577 aa9.71□□□□□ -0.86
LSM5-208ENST00000450169 ZNF589Q86UQ0 364 aaPredicted RBP9.71□□□□□ -0.86
LSM5-208ENST00000450169 FSD1Q9BTV5 496 aa9.71□□□□□ -0.86
LSM5-208ENST00000450169 CDK19Q9BWU1 502 aa9.71□□□□□ -0.86
LSM5-208ENST00000450169 LRRC2Q9BYS8 371 aa9.71□□□□□ -0.86
LSM5-208ENST00000450169 GPCPD1Q9NPB8 672 aa9.71□□□□□ -0.86
LSM5-208ENST00000450169 NPDC1Q9NQX5 325 aaPredicted RBP9.71□□□□□ -0.86
LSM5-208ENST00000450169 IRAK4Q9NWZ3 460 aa9.71□□□□□ -0.86
LSM5-208ENST00000450169 KDM6AO15550 1401 aaPredicted RBP9.7□□□□□ -0.86
LSM5-208ENST00000450169 CARMIL3Q8ND23 1372 aa9.7□□□□□ -0.86
LSM5-208ENST00000450169 PPP1R12BO60237 982 aaPredicted RBP9.7□□□□□ -0.86
LSM5-208ENST00000450169 PPFIA3O75145 1194 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms