RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 PICK1Q9NRD5 415 aa8.07□□□□□ -1.12
UBBP1-201ENST00000392399 FZD1Q9UP38 647 aa8.07□□□□□ -1.12
UBBP1-201ENST00000392399 ZMYM6O95789 1325 aa8.06□□□□□ -1.12
UBBP1-201ENST00000392399 FOCADQ5VW36 1801 aa8.06□□□□□ -1.12
UBBP1-201ENST00000392399 FAM155AB1AL88 458 aaPredicted RBP8.06□□□□□ -1.12
UBBP1-201ENST00000392399 CXCL11O14625 94 aa8.06□□□□□ -1.12
UBBP1-201ENST00000392399 SGSM2O43147 1006 aa8.06□□□□□ -1.12
UBBP1-201ENST00000392399 FGAP02671 866 aa8.06□□□□□ -1.12
UBBP1-201ENST00000392399 NT5C2P49902 561 aa8.06□□□□□ -1.12
UBBP1-201ENST00000392399 MAP2K1Q02750 393 aaPredicted RBP8.06□□□□□ -1.12
UBBP1-201ENST00000392399 CERKLQ49MI3 558 aaPredicted RBP8.06□□□□□ -1.12
UBBP1-201ENST00000392399 SPRYD7Q5W111 196 aa8.06□□□□□ -1.12
UBBP1-201ENST00000392399 CCDC129Q6ZRS4 1044 aa8.06□□□□□ -1.12
UBBP1-201ENST00000392399 C16orf86Q6ZW13 317 aa8.06□□□□□ -1.12
UBBP1-201ENST00000392399 ZNF589Q86UQ0 364 aaPredicted RBP8.06□□□□□ -1.12
UBBP1-201ENST00000392399 RASAL3Q86YV0 1011 aa8.06□□□□□ -1.12
UBBP1-201ENST00000392399 JMYQ8N9B5 988 aa8.06□□□□□ -1.12
UBBP1-201ENST00000392399 WNK4Q96J92 1243 aa8.06□□□□□ -1.12
UBBP1-201ENST00000392399 CLMNQ96JQ2 1002 aa8.06□□□□□ -1.12
UBBP1-201ENST00000392399 ELP3Q9H9T3 547 aa8.06□□□□□ -1.12
UBBP1-201ENST00000392399 EPB41L4AQ9HCS5 686 aaPredicted RBP8.06□□□□□ -1.12
UBBP1-201ENST00000392399 CABP5Q9NP86 173 aa8.06□□□□□ -1.12
UBBP1-201ENST00000392399 CTNNA3Q9UI47 895 aa8.06□□□□□ -1.12
UBBP1-201ENST00000392399 ANAPC4Q9UJX5 808 aa8.06□□□□□ -1.12
UBBP1-201ENST00000392399 SNCAIPQ9Y6H5 919 aa8.06□□□□□ -1.12
UBBP1-201ENST00000392399 MANSC4A6NHS7 340 aaPredicted RBP8.05□□□□□ -1.12
UBBP1-201ENST00000392399 USP17L5A8MUK1 530 aa8.05□□□□□ -1.12
UBBP1-201ENST00000392399 MINDY4BA8MYZ0 360 aa8.05□□□□□ -1.12
UBBP1-201ENST00000392399 FOXP2O15409 715 aa8.05□□□□□ -1.12
UBBP1-201ENST00000392399 PCP11498 1178 aaKnown RBP8.05□□□□□ -1.12
UBBP1-201ENST00000392399 PTPRAP18433 802 aa8.05□□□□□ -1.12
UBBP1-201ENST00000392399 SHMT1P34896 483 aa8.05□□□□□ -1.12
UBBP1-201ENST00000392399 TM4SF4P48230 202 aa8.05□□□□□ -1.12
UBBP1-201ENST00000392399 CDK8P49336 464 aa8.05□□□□□ -1.12
UBBP1-201ENST00000392399 GTF2A2P52657 109 aa8.05□□□□□ -1.12
UBBP1-201ENST00000392399 KIF23Q02241 960 aaPredicted RBP8.05□□□□□ -1.12
UBBP1-201ENST00000392399 PDE4BQ07343 736 aa8.05□□□□□ -1.12
UBBP1-201ENST00000392399 SREBF2Q12772 1141 aa8.05□□□□□ -1.12
UBBP1-201ENST00000392399 PPIL2Q13356 520 aa8.05□□□□□ -1.12
UBBP1-201ENST00000392399 VPS53Q5VIR6 699 aa8.05□□□□□ -1.12
UBBP1-201ENST00000392399 KIAA1211Q6ZU35 1233 aa8.05□□□□□ -1.12
UBBP1-201ENST00000392399 RASEFQ8IZ41 740 aa8.05□□□□□ -1.12
UBBP1-201ENST00000392399 OPTNQ96CV9 577 aa8.05□□□□□ -1.12
UBBP1-201ENST00000392399 MS4A3Q96HJ5 214 aa8.05□□□□□ -1.12
UBBP1-201ENST00000392399 DNAJC18Q9H819 358 aa8.05□□□□□ -1.12
UBBP1-201ENST00000392399 MKNK2Q9HBH9 465 aa8.05□□□□□ -1.12
UBBP1-201ENST00000392399 AS3MTQ9HBK9 375 aa8.05□□□□□ -1.12
UBBP1-201ENST00000392399 MYH1P12882 1939 aa8.05□□□□□ -1.12
UBBP1-201ENST00000392399 TESPA1A2RU30 521 aaPredicted RBP8.04□□□□□ -1.12
UBBP1-201ENST00000392399 FAM196BA6NMK8 535 aa8.04□□□□□ -1.12
UBBP1-201ENST00000392399 ZNF213O14771 459 aa8.04□□□□□ -1.12
UBBP1-201ENST00000392399 EIF5BO60841 1220 aaKnown RBP8.04□□□□□ -1.12
UBBP1-201ENST00000392399 CDC45O75419 566 aa8.04□□□□□ -1.12
UBBP1-201ENST00000392399 SLURP2P0DP57 97 aa8.04□□□□□ -1.12
UBBP1-201ENST00000392399 CYP2D6P10635 497 aa8.04□□□□□ -1.12
UBBP1-201ENST00000392399 CETPP11597 493 aa8.04□□□□□ -1.12
UBBP1-201ENST00000392399 PPARAQ07869 468 aa8.04□□□□□ -1.12
UBBP1-201ENST00000392399 GRM1Q13255 1194 aa8.04□□□□□ -1.12
UBBP1-201ENST00000392399 SNAPC2Q13487 334 aa8.04□□□□□ -1.12
UBBP1-201ENST00000392399 ABCB5Q2M3G0 1257 aa8.04□□□□□ -1.12
UBBP1-201ENST00000392399 SLC4A8Q2Y0W8 1093 aa8.04□□□□□ -1.12
UBBP1-201ENST00000392399 OTUD7BQ6GQQ9 843 aa8.04□□□□□ -1.12
UBBP1-201ENST00000392399 SKAP1Q86WV1 359 aa8.04□□□□□ -1.12
UBBP1-201ENST00000392399 ZNF444Q8N0Y2 327 aaPredicted RBP8.04□□□□□ -1.12
UBBP1-201ENST00000392399 KIF12Q96FN5 646 aa8.04□□□□□ -1.12
UBBP1-201ENST00000392399 OTUD5Q96G74 571 aa8.04□□□□□ -1.12
UBBP1-201ENST00000392399 ESYT1Q9BSJ8 1104 aa8.04□□□□□ -1.12
UBBP1-201ENST00000392399 WDR18Q9BV38 432 aa8.04□□□□□ -1.12
UBBP1-201ENST00000392399 RNF41Q9H4P4 317 aaPredicted RBP8.04□□□□□ -1.12
UBBP1-201ENST00000392399 KCNH4Q9UQ05 1017 aa8.04□□□□□ -1.12
UBBP1-201ENST00000392399 AFG3L2Q9Y4W6 797 aa8.04□□□□□ -1.12
UBBP1-201ENST00000392399 ZHX2Q9Y6X8 837 aa8.04□□□□□ -1.12
UBBP1-201ENST00000392399 ROBO3Q96MS0 1386 aa8.04□□□□□ -1.12
UBBP1-201ENST00000392399 CDK5RAP2Q96SN8 1893 aa8.04□□□□□ -1.12
UBBP1-201ENST00000392399 CYP2D7A0A087X1C5 515 aa8.03□□□□□ -1.12
UBBP1-201ENST00000392399 C19orf81C9J6K1 198 aa8.03□□□□□ -1.12
UBBP1-201ENST00000392399 IRF6O14896 467 aa8.03□□□□□ -1.12
UBBP1-201ENST00000392399 CA12O43570 354 aa8.03□□□□□ -1.12
UBBP1-201ENST00000392399 AOC2O75106 756 aa8.03□□□□□ -1.12
UBBP1-201ENST00000392399 ALDH1A1P00352 501 aa8.03□□□□□ -1.12
UBBP1-201ENST00000392399 GH2P01242 217 aa8.03□□□□□ -1.12
UBBP1-201ENST00000392399 FGRP09769 529 aa8.03□□□□□ -1.12
UBBP1-201ENST00000392399 GJA5P36382 358 aa8.03□□□□□ -1.12
UBBP1-201ENST00000392399 RRP1BQ14684 758 aaKnown RBP8.03□□□□□ -1.12
UBBP1-201ENST00000392399 IMMTQ16891 758 aaKnown RBP8.03□□□□□ -1.12
UBBP1-201ENST00000392399 PPP4R3BQ5MIZ7 849 aa8.03□□□□□ -1.12
UBBP1-201ENST00000392399 ASTLQ6HA08 431 aaPredicted RBP8.03□□□□□ -1.12
UBBP1-201ENST00000392399 TMEM179Q6ZVK1 233 aa8.03□□□□□ -1.12
UBBP1-201ENST00000392399 FASTKD5Q7L8L6 764 aaKnown RBP8.03□□□□□ -1.12
UBBP1-201ENST00000392399 ZNF280CQ8ND82 737 aa8.03□□□□□ -1.12
UBBP1-201ENST00000392399 MAP4K1Q92918 833 aa8.03□□□□□ -1.12
UBBP1-201ENST00000392399 DYNLL2Q96FJ2 89 aa8.03□□□□□ -1.12
UBBP1-201ENST00000392399 MS4A4AQ96JQ5 239 aa8.03□□□□□ -1.12
UBBP1-201ENST00000392399 BEGAINQ9BUH8 593 aa8.03□□□□□ -1.12
UBBP1-201ENST00000392399 ZCCHC17Q9NP64 241 aaKnown RBP8.03□□□□□ -1.12
UBBP1-201ENST00000392399 ZBTB21Q9ULJ3 1066 aa8.03□□□□□ -1.12
UBBP1-201ENST00000392399 USP17L10C9JJH3 530 aa8.02□□□□□ -1.13
UBBP1-201ENST00000392399 MPHOSPH10O00566 681 aaKnown RBP8.02□□□□□ -1.13
UBBP1-201ENST00000392399 EPB41L2O43491 1005 aaKnown RBP8.02□□□□□ -1.13
UBBP1-201ENST00000392399 ORC4O43929 436 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms