RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 ERVK-7P63135 1459 aa15.84■□□□□ 0.13
LMX1B-202ENST00000373474 CFAP74Q9C0B2 1584 aa15.84■□□□□ 0.13
LMX1B-202ENST00000373474 SMIM23A6NLE4 172 aa15.84■□□□□ 0.13
LMX1B-202ENST00000373474 CALUO43852 315 aaPredicted RBP15.84■□□□□ 0.13
LMX1B-202ENST00000373474 MROH5Q6ZUA9 1318 aa15.84■□□□□ 0.13
LMX1B-202ENST00000373474 PNOCQ13519 176 aa15.83■□□□□ 0.13
LMX1B-202ENST00000373474 TTC6Q86TZ1 520 aa15.83■□□□□ 0.13
LMX1B-202ENST00000373474 SPATA5Q8NB90 893 aa15.83■□□□□ 0.13
LMX1B-202ENST00000373474 MTMR6Q9Y217 621 aa15.83■□□□□ 0.13
LMX1B-202ENST00000373474 VIMP08670 466 aaKnown RBP15.83■□□□□ 0.13
LMX1B-202ENST00000373474 ZAP70P43403 619 aa15.83■□□□□ 0.13
LMX1B-202ENST00000373474 NELFBQ8WX92 580 aa15.83■□□□□ 0.13
LMX1B-202ENST00000373474 NOX5Q96PH1 765 aa15.83■□□□□ 0.13
LMX1B-202ENST00000373474 XPO4Q9C0E2 1151 aaKnown RBP15.83■□□□□ 0.13
LMX1B-202ENST00000373474 FAM114A2Q9NRY5 505 aa15.83■□□□□ 0.13
LMX1B-202ENST00000373474 RTCBQ9Y3I0 505 aaKnown RBP15.83■□□□□ 0.13
LMX1B-202ENST00000373474 CALCOCO2Q13137 446 aa15.83■□□□□ 0.12
LMX1B-202ENST00000373474 MYL10Q9BUA6 226 aa15.83■□□□□ 0.12
LMX1B-202ENST00000373474 USP44Q9H0E7 712 aa15.83■□□□□ 0.12
LMX1B-202ENST00000373474 ZNF532Q9HCE3 1301 aa15.83■□□□□ 0.12
LMX1B-202ENST00000373474 PFKFB2O60825 505 aa15.83■□□□□ 0.12
LMX1B-202ENST00000373474 PPP1R12CQ9BZL4 782 aa15.83■□□□□ 0.12
LMX1B-202ENST00000373474 TPCN1Q9ULQ1 816 aa15.83■□□□□ 0.12
LMX1B-202ENST00000373474 ATP6V0A2Q9Y487 856 aa15.83■□□□□ 0.12
LMX1B-202ENST00000373474 WHAMMP3Q1A5X7 153 aa15.83■□□□□ 0.12
LMX1B-202ENST00000373474 DCAF8L1A6NGE4 600 aa15.82■□□□□ 0.12
LMX1B-202ENST00000373474 NR1I2O75469 434 aa15.82■□□□□ 0.12
LMX1B-202ENST00000373474 HIBADHP31937 336 aaKnown RBP15.82■□□□□ 0.12
LMX1B-202ENST00000373474 MRPL12P52815 198 aaKnown RBP15.82■□□□□ 0.12
LMX1B-202ENST00000373474 IFT20Q8IY31 132 aa15.82■□□□□ 0.12
LMX1B-202ENST00000373474 TAB2Q9NYJ8 693 aa15.82■□□□□ 0.12
LMX1B-202ENST00000373474 MAPK8IP1Q9UQF2 711 aa15.82■□□□□ 0.12
LMX1B-202ENST00000373474 GOLGA6CA6NDK9 693 aa15.82■□□□□ 0.12
LMX1B-202ENST00000373474 GOLGA6DP0CG33 693 aa15.82■□□□□ 0.12
LMX1B-202ENST00000373474 BCL2L12Q9HB09 334 aa15.82■□□□□ 0.12
LMX1B-202ENST00000373474 GOLGA6AQ9NYA3 693 aa15.82■□□□□ 0.12
LMX1B-202ENST00000373474 SH3TC1Q8TE82 1336 aa15.82■□□□□ 0.12
LMX1B-202ENST00000373474 A0A0D9SFI3 127 aa15.82■□□□□ 0.12
LMX1B-202ENST00000373474 PKP1Q13835 747 aa15.82■□□□□ 0.12
LMX1B-202ENST00000373474 MAP7Q14244 749 aa15.82■□□□□ 0.12
LMX1B-202ENST00000373474 RBM17Q96I25 401 aaKnown RBP15.82■□□□□ 0.12
LMX1B-202ENST00000373474 JAG2Q9Y219 1238 aa15.82■□□□□ 0.12
LMX1B-202ENST00000373474 STK24Q9Y6E0 443 aa15.82■□□□□ 0.12
LMX1B-202ENST00000373474 TLDC2A0PJX2 215 aa15.81■□□□□ 0.12
LMX1B-202ENST00000373474 TEX11Q8IYF3 940 aa15.81■□□□□ 0.12
LMX1B-202ENST00000373474 KIAA1468Q9P260 1216 aa15.81■□□□□ 0.12
LMX1B-202ENST00000373474 PLEKHG3A1L390 1219 aa15.81■□□□□ 0.12
LMX1B-202ENST00000373474 PLS1Q14651 629 aa15.81■□□□□ 0.12
LMX1B-202ENST00000373474 KCNJ14Q9UNX9 436 aa15.81■□□□□ 0.12
LMX1B-202ENST00000373474 ZNF521Q96K83 1311 aa15.81■□□□□ 0.12
LMX1B-202ENST00000373474 DTNBO60941 627 aa15.81■□□□□ 0.12
LMX1B-202ENST00000373474 PFKFB1P16118 471 aa15.81■□□□□ 0.12
LMX1B-202ENST00000373474 CCDC14Q49A88 953 aa15.81■□□□□ 0.12
LMX1B-202ENST00000373474 MYSM1Q5VVJ2 828 aa15.81■□□□□ 0.12
LMX1B-202ENST00000373474 KRT25Q7Z3Z0 450 aa15.81■□□□□ 0.12
LMX1B-202ENST00000373474 NSFL1CQ9UNZ2 370 aaKnown RBP15.81■□□□□ 0.12
LMX1B-202ENST00000373474 HAUS3Q68CZ6 603 aa15.81■□□□□ 0.12
LMX1B-202ENST00000373474 CCDC25Q86WR0 208 aa15.81■□□□□ 0.12
LMX1B-202ENST00000373474 SMC1BQ8NDV3 1235 aa15.81■□□□□ 0.12
LMX1B-202ENST00000373474 CCDC51Q96ER9 411 aa15.81■□□□□ 0.12
LMX1B-202ENST00000373474 PRDM15P57071 1507 aaPredicted RBP15.81■□□□□ 0.12
LMX1B-202ENST00000373474 AP1ARQ63HQ0 302 aa15.81■□□□□ 0.12
LMX1B-202ENST00000373474 GPR161Q8N6U8 529 aaKnown RBP15.81■□□□□ 0.12
LMX1B-202ENST00000373474 ZC3H12CQ9C0D7 883 aaKnown RBP15.81■□□□□ 0.12
LMX1B-202ENST00000373474 GPCPD1Q9NPB8 672 aa15.81■□□□□ 0.12
LMX1B-202ENST00000373474 RUFY4Q6ZNE9 571 aa15.8■□□□□ 0.12
LMX1B-202ENST00000373474 ZNF365Q70YC5 407 aa15.8■□□□□ 0.12
LMX1B-202ENST00000373474 SERTAD1Q9UHV2 236 aa15.8■□□□□ 0.12
LMX1B-202ENST00000373474 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.8■□□□□ 0.12
LMX1B-202ENST00000373474 TNFAIP3P21580 790 aa15.8■□□□□ 0.12
LMX1B-202ENST00000373474 NUF2Q9BZD4 464 aa15.8■□□□□ 0.12
LMX1B-202ENST00000373474 LSG1Q9H089 658 aaKnown RBP15.8■□□□□ 0.12
LMX1B-202ENST00000373474 STAP2Q9UGK3 403 aa15.8■□□□□ 0.12
LMX1B-202ENST00000373474 UTP11Q9Y3A2 253 aaKnown RBP15.8■□□□□ 0.12
LMX1B-202ENST00000373474 ADCY9O60503 1353 aa15.8■□□□□ 0.12
LMX1B-202ENST00000373474 LZTS2Q9BRK4 669 aa15.8■□□□□ 0.12
LMX1B-202ENST00000373474 TXNDC16Q9P2K2 825 aa15.8■□□□□ 0.12
LMX1B-202ENST00000373474 WWC3Q9ULE0 1092 aa15.8■□□□□ 0.12
LMX1B-202ENST00000373474 UTP14CQ5TAP6 766 aaKnown RBP15.8■□□□□ 0.12
LMX1B-202ENST00000373474 CERS3Q8IU89 383 aa15.8■□□□□ 0.12
LMX1B-202ENST00000373474 TSKSQ9UJT2 592 aa15.8■□□□□ 0.12
LMX1B-202ENST00000373474 SHROOM2Q13796 1616 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 STMN1P16949 149 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 OAS2P29728 719 aaKnown RBP15.79■□□□□ 0.12
LMX1B-202ENST00000373474 TXKP42681 527 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 NONOQ15233 471 aaKnown RBP eCLIP15.79■□□□□ 0.12
LMX1B-202ENST00000373474 FCHSD1Q86WN1 690 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 SPATS2Q86XZ4 545 aaKnown RBP15.79■□□□□ 0.12
LMX1B-202ENST00000373474 ZMYM6O95789 1325 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 KRT9P35527 623 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 PLCB3Q01970 1234 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 BEND3Q5T5X7 828 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 OGFOD1Q8N543 542 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 KIFAP3Q92845 792 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 IQCDQ96DY2 449 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 GLT8D2Q9H1C3 349 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 AATKQ6ZMQ8 1374 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 A1BGP04217 495 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 TRPC3Q13507 836 aa15.79■□□□□ 0.12
LMX1B-202ENST00000373474 SLC9C1Q4G0N8 1177 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms