RNA–Protein interactions for RNA: ENST00000373292.8

HDLBP-202, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-202ENST00000373292 ARPP21Q9UBL0 812 aaPredicted RBP12.98□□□□□ -0.33
HDLBP-202ENST00000373292 WNT7AO00755 349 aa12.97□□□□□ -0.33
HDLBP-202ENST00000373292 NR1I2O75469 434 aa12.97□□□□□ -0.33
HDLBP-202ENST00000373292 IFIT1BQ5T764 474 aaKnown RBP12.97□□□□□ -0.33
HDLBP-202ENST00000373292 CRACR2BQ8N4Y2 399 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-202ENST00000373292 SCAF8Q9UPN6 1271 aaKnown RBP12.97□□□□□ -0.33
HDLBP-202ENST00000373292 ORC4O43929 436 aa12.97□□□□□ -0.33
HDLBP-202ENST00000373292 IARSP41252 1262 aaKnown RBP12.97□□□□□ -0.33
HDLBP-202ENST00000373292 ZNF445P59923 1031 aa12.97□□□□□ -0.33
HDLBP-202ENST00000373292 NR5A1Q13285 461 aa12.97□□□□□ -0.33
HDLBP-202ENST00000373292 RTN1Q16799 776 aa12.97□□□□□ -0.33
HDLBP-202ENST00000373292 DACT2Q5SW24 774 aa12.97□□□□□ -0.33
HDLBP-202ENST00000373292 CDC42EP5Q6NZY7 148 aa12.97□□□□□ -0.33
HDLBP-202ENST00000373292 SRBD1Q8N5C6 995 aaKnown RBP12.97□□□□□ -0.33
HDLBP-202ENST00000373292 ERCC4Q92889 916 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-202ENST00000373292 FAM163AQ96GL9 167 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-202ENST00000373292 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.97□□□□□ -0.33
HDLBP-202ENST00000373292 TSPY2A6NKD2 308 aa12.96□□□□□ -0.33
HDLBP-202ENST00000373292 RNF214Q8ND24 703 aa12.96□□□□□ -0.33
HDLBP-202ENST00000373292 ZNF277Q9NRM2 450 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-202ENST00000373292 C10orf71Q711Q0 1435 aa12.96□□□□□ -0.33
HDLBP-202ENST00000373292 TMC4Q7Z404 712 aa12.96□□□□□ -0.33
HDLBP-202ENST00000373292 BTBD18B2RXH4 712 aa12.96□□□□□ -0.34
HDLBP-202ENST00000373292 FMNL1O95466 1100 aaPredicted RBP12.96□□□□□ -0.34
HDLBP-202ENST00000373292 BAG3O95817 575 aa12.96□□□□□ -0.34
HDLBP-202ENST00000373292 IFNAR1P17181 557 aa12.96□□□□□ -0.34
HDLBP-202ENST00000373292 CDK8P49336 464 aa12.96□□□□□ -0.34
HDLBP-202ENST00000373292 TCP10Q12799 353 aa12.96□□□□□ -0.34
HDLBP-202ENST00000373292 ATP6V1DQ9Y5K8 247 aa12.96□□□□□ -0.34
HDLBP-202ENST00000373292 MRVI1Q9Y6F6 885 aa12.96□□□□□ -0.34
HDLBP-202ENST00000373292 GOLGA8HP0CJ92 632 aa12.95□□□□□ -0.34
HDLBP-202ENST00000373292 SF3B2Q13435 895 aaKnown RBP12.95□□□□□ -0.34
HDLBP-202ENST00000373292 ZBTB12Q9Y330 459 aaPredicted RBP12.95□□□□□ -0.34
HDLBP-202ENST00000373292 SIPA1L1O43166 1804 aa12.95□□□□□ -0.34
HDLBP-202ENST00000373292 SHTN1A0MZ66 631 aa12.95□□□□□ -0.34
HDLBP-202ENST00000373292 ERICH2A1L162 156 aa12.95□□□□□ -0.34
HDLBP-202ENST00000373292 GSTO1P78417 241 aa12.95□□□□□ -0.34
HDLBP-202ENST00000373292 VPS54Q9P1Q0 977 aa12.95□□□□□ -0.34
HDLBP-202ENST00000373292 V9GY48 417 aaPredicted RBP12.95□□□□□ -0.34
HDLBP-202ENST00000373292 NID2Q14112 1375 aa12.95□□□□□ -0.34
HDLBP-202ENST00000373292 EIF6P56537 245 aaKnown RBP12.94□□□□□ -0.34
HDLBP-202ENST00000373292 DNAJC18Q9H819 358 aa12.94□□□□□ -0.34
HDLBP-202ENST00000373292 USP40Q9NVE5 1235 aa12.94□□□□□ -0.34
HDLBP-202ENST00000373292 DACT1Q9NYF0 836 aa12.94□□□□□ -0.34
HDLBP-202ENST00000373292 DHX16O60231 1041 aaKnown RBP12.94□□□□□ -0.34
HDLBP-202ENST00000373292 TOB1P50616 345 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-202ENST00000373292 SART3Q15020 963 aaKnown RBP12.94□□□□□ -0.34
HDLBP-202ENST00000373292 R3HDM1Q15032 1099 aaKnown RBP12.94□□□□□ -0.34
HDLBP-202ENST00000373292 SH3BP5LQ7L8J4 393 aa12.94□□□□□ -0.34
HDLBP-202ENST00000373292 TBC1D22AQ8WUA7 517 aa12.94□□□□□ -0.34
HDLBP-202ENST00000373292 PPP1R1BQ9UD71 204 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-202ENST00000373292 ROBO3Q96MS0 1386 aa12.94□□□□□ -0.34
HDLBP-202ENST00000373292 PSDA5PKW4 1024 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-202ENST00000373292 G3V3G9 751 aa12.94□□□□□ -0.34
HDLBP-202ENST00000373292 RAD17O75943 681 aa12.94□□□□□ -0.34
HDLBP-202ENST00000373292 CRKP46108 304 aa12.94□□□□□ -0.34
HDLBP-202ENST00000373292 NPY5RQ15761 445 aa12.94□□□□□ -0.34
HDLBP-202ENST00000373292 DCAF8Q5TAQ9 597 aa12.94□□□□□ -0.34
HDLBP-202ENST00000373292 MYSM1Q5VVJ2 828 aa12.94□□□□□ -0.34
HDLBP-202ENST00000373292 IQCA1Q86XH1 822 aa12.94□□□□□ -0.34
HDLBP-202ENST00000373292 CDAN1Q8IWY9 1227 aa12.94□□□□□ -0.34
HDLBP-202ENST00000373292 ZSCAN16Q9H4T2 348 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-202ENST00000373292 MKNK2Q9HBH9 465 aa12.94□□□□□ -0.34
HDLBP-202ENST00000373292 DDTLA6NHG4 134 aaPredicted RBP12.93□□□□□ -0.34
HDLBP-202ENST00000373292 CYTH3O43739 400 aa12.93□□□□□ -0.34
HDLBP-202ENST00000373292 MBD3O95983 291 aa12.93□□□□□ -0.34
HDLBP-202ENST00000373292 SSRP1Q08945 709 aaKnown RBP12.93□□□□□ -0.34
HDLBP-202ENST00000373292 LRSAM1Q6UWE0 723 aa12.93□□□□□ -0.34
HDLBP-202ENST00000373292 LDHCP07864 332 aa12.93□□□□□ -0.34
HDLBP-202ENST00000373292 PTMSP20962 102 aa12.93□□□□□ -0.34
HDLBP-202ENST00000373292 MARCKSP29966 332 aaPredicted RBP12.93□□□□□ -0.34
HDLBP-202ENST00000373292 GRIN1Q05586 938 aa12.93□□□□□ -0.34
HDLBP-202ENST00000373292 PDE4BQ07343 736 aa12.93□□□□□ -0.34
HDLBP-202ENST00000373292 TYW1BQ6NUM6 668 aa12.93□□□□□ -0.34
HDLBP-202ENST00000373292 C16orf86Q6ZW13 317 aa12.93□□□□□ -0.34
HDLBP-202ENST00000373292 PODNQ7Z5L7 613 aa12.93□□□□□ -0.34
HDLBP-202ENST00000373292 CKAP2LQ8IYA6 745 aa12.93□□□□□ -0.34
HDLBP-202ENST00000373292 CNKSR1Q969H4 720 aa12.93□□□□□ -0.34
HDLBP-202ENST00000373292 RCOR1Q9UKL0 485 aa12.93□□□□□ -0.34
HDLBP-202ENST00000373292 PCDHA7Q9UN72 937 aa12.93□□□□□ -0.34
HDLBP-202ENST00000373292 STX8Q9UNK0 236 aa12.93□□□□□ -0.34
HDLBP-202ENST00000373292 ELP1O95163 1332 aa12.93□□□□□ -0.34
HDLBP-202ENST00000373292 CENPFP49454 3210 aa12.93□□□□□ -0.34
HDLBP-202ENST00000373292 PPIP5K2O43314 1243 aa12.93□□□□□ -0.34
HDLBP-202ENST00000373292 KIAA2012Q0VF49 1180 aa12.93□□□□□ -0.34
HDLBP-202ENST00000373292 SNW1Q13573 536 aaKnown RBP12.93□□□□□ -0.34
HDLBP-202ENST00000373292 CEP95Q96GE4 821 aa12.93□□□□□ -0.34
HDLBP-202ENST00000373292 FAM198AQ9UFP1 575 aa12.93□□□□□ -0.34
HDLBP-202ENST00000373292 PRELPP51888 382 aa12.92□□□□□ -0.34
HDLBP-202ENST00000373292 JAG1P78504 1218 aa12.92□□□□□ -0.34
HDLBP-202ENST00000373292 LINC00301Q8NCQ3 95 aa12.92□□□□□ -0.34
HDLBP-202ENST00000373292 PRMT6Q96LA8 375 aaPredicted RBP12.92□□□□□ -0.34
HDLBP-202ENST00000373292 TMEM47Q9BQJ4 181 aa12.92□□□□□ -0.34
HDLBP-202ENST00000373292 TSPY3P0CV98 308 aa12.92□□□□□ -0.34
HDLBP-202ENST00000373292 TSPY8P0CW00 308 aa12.92□□□□□ -0.34
HDLBP-202ENST00000373292 AKR1B1P15121 316 aa12.92□□□□□ -0.34
HDLBP-202ENST00000373292 GABPAQ06546 454 aa12.92□□□□□ -0.34
HDLBP-202ENST00000373292 TTLL6Q8N841 843 aa12.92□□□□□ -0.34
HDLBP-202ENST00000373292 SCAND2PQ9GZW5 306 aaPredicted RBP12.92□□□□□ -0.34
HDLBP-202ENST00000373292 MAD2L2Q9UI95 211 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms