RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 PARP3Q9Y6F1 533 aa12.15□□□□□ -0.46
SMC3-201ENST00000361804 PSDA5PKW4 1024 aaPredicted RBP12.15□□□□□ -0.46
SMC3-201ENST00000361804 PRDM1O75626 825 aa12.15□□□□□ -0.46
SMC3-201ENST00000361804 KCNQ4P56696 695 aa12.15□□□□□ -0.46
SMC3-201ENST00000361804 GNG11P61952 73 aa12.15□□□□□ -0.46
SMC3-201ENST00000361804 EVX2Q03828 476 aa12.15□□□□□ -0.46
SMC3-201ENST00000361804 DIS3L2Q8IYB7 885 aaKnown RBP12.15□□□□□ -0.46
SMC3-201ENST00000361804 PPP2R2CQ9Y2T4 447 aa12.15□□□□□ -0.46
SMC3-201ENST00000361804 MYH6P13533 1939 aa12.15□□□□□ -0.46
SMC3-201ENST00000361804 TEX33O43247 280 aa12.15□□□□□ -0.46
SMC3-201ENST00000361804 CDK11BP21127 795 aaKnown RBP12.15□□□□□ -0.46
SMC3-201ENST00000361804 AFMP43652 599 aa12.15□□□□□ -0.46
SMC3-201ENST00000361804 MAPK8IP2Q13387 824 aaPredicted RBP12.15□□□□□ -0.46
SMC3-201ENST00000361804 EARS2Q5JPH6 523 aaKnown RBP12.15□□□□□ -0.46
SMC3-201ENST00000361804 TEX35Q5T0J7 233 aa12.15□□□□□ -0.46
SMC3-201ENST00000361804 ADGRA1Q86SQ6 560 aa12.15□□□□□ -0.46
SMC3-201ENST00000361804 SASH3O75995 380 aa12.14□□□□□ -0.47
SMC3-201ENST00000361804 CTSWP56202 376 aa12.14□□□□□ -0.47
SMC3-201ENST00000361804 MNS1Q8NEH6 495 aa12.14□□□□□ -0.47
SMC3-201ENST00000361804 UBXN4Q92575 508 aa12.14□□□□□ -0.47
SMC3-201ENST00000361804 STRBPQ96SI9 672 aaKnown RBP12.14□□□□□ -0.47
SMC3-201ENST00000361804 TRMT112Q9UI30 125 aaKnown RBP12.14□□□□□ -0.47
SMC3-201ENST00000361804 SLC12A7Q9Y666 1083 aa12.14□□□□□ -0.47
SMC3-201ENST00000361804 MAST2Q6P0Q8 1798 aa12.14□□□□□ -0.47
SMC3-201ENST00000361804 IRS4O14654 1257 aaPredicted RBP12.14□□□□□ -0.47
SMC3-201ENST00000361804 IKBKBO14920 756 aa12.14□□□□□ -0.47
SMC3-201ENST00000361804 OLFM4Q6UX06 510 aa12.14□□□□□ -0.47
SMC3-201ENST00000361804 A0A087X0B3 334 aa12.14□□□□□ -0.47
SMC3-201ENST00000361804 NTSR2O95665 410 aa12.14□□□□□ -0.47
SMC3-201ENST00000361804 ABL1P00519 1130 aa12.14□□□□□ -0.47
SMC3-201ENST00000361804 TRIM29Q14134 588 aa12.14□□□□□ -0.47
SMC3-201ENST00000361804 FOCADQ5VW36 1801 aa12.14□□□□□ -0.47
SMC3-201ENST00000361804 TEX13AQ9BXU3 409 aaPredicted RBP12.14□□□□□ -0.47
SMC3-201ENST00000361804 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.14□□□□□ -0.47
SMC3-201ENST00000361804 LZTFL1Q9NQ48 299 aa12.14□□□□□ -0.47
SMC3-201ENST00000361804 SOWAHDA6NJG2 315 aa12.13□□□□□ -0.47
SMC3-201ENST00000361804 GABPB1Q06547 395 aaPredicted RBP12.13□□□□□ -0.47
SMC3-201ENST00000361804 KIF6Q6ZMV9 814 aa12.13□□□□□ -0.47
SMC3-201ENST00000361804 LCORLQ8N3X6 602 aa12.13□□□□□ -0.47
SMC3-201ENST00000361804 EPSTI1Q96J88 318 aa12.13□□□□□ -0.47
SMC3-201ENST00000361804 MRPL44Q9H9J2 332 aaKnown RBP12.13□□□□□ -0.47
SMC3-201ENST00000361804 FAM53CQ9NYF3 392 aa12.13□□□□□ -0.47
SMC3-201ENST00000361804 ABCC12Q96J65 1359 aa12.13□□□□□ -0.47
SMC3-201ENST00000361804 CYP2D7A0A087X1C5 515 aa12.13□□□□□ -0.47
SMC3-201ENST00000361804 RASGRF1Q13972 1273 aa12.13□□□□□ -0.47
SMC3-201ENST00000361804 CREBRFQ8IUR6 639 aa12.13□□□□□ -0.47
SMC3-201ENST00000361804 IFNL3Q8IZI9 196 aa12.13□□□□□ -0.47
SMC3-201ENST00000361804 TC2NQ8N9U0 490 aa12.13□□□□□ -0.47
SMC3-201ENST00000361804 NAPBQ9H115 298 aa12.13□□□□□ -0.47
SMC3-201ENST00000361804 CABP5Q9NP86 173 aa12.13□□□□□ -0.47
SMC3-201ENST00000361804 MDM2Q00987 491 aaPredicted RBP12.13□□□□□ -0.47
SMC3-201ENST00000361804 SLC4A8Q2Y0W8 1093 aa12.13□□□□□ -0.47
SMC3-201ENST00000361804 NOSTRINQ8IVI9 506 aa12.13□□□□□ -0.47
SMC3-201ENST00000361804 SDR42E1Q8WUS8 393 aa12.13□□□□□ -0.47
SMC3-201ENST00000361804 KCND1Q9NSA2 647 aa12.13□□□□□ -0.47
SMC3-201ENST00000361804 TADA3O75528 432 aa12.13□□□□□ -0.47
SMC3-201ENST00000361804 SSRP1Q08945 709 aaKnown RBP12.13□□□□□ -0.47
SMC3-201ENST00000361804 POSTNQ15063 836 aa12.13□□□□□ -0.47
SMC3-201ENST00000361804 KRI1Q8N9T8 703 aaKnown RBP12.13□□□□□ -0.47
SMC3-201ENST00000361804 NEK11Q8NG66 645 aa12.13□□□□□ -0.47
SMC3-201ENST00000361804 DHX58Q96C10 678 aa12.13□□□□□ -0.47
SMC3-201ENST00000361804 BAG1Q99933 345 aaPredicted RBP12.13□□□□□ -0.47
SMC3-201ENST00000361804 ANKRD31Q8N7Z5 1873 aa12.12□□□□□ -0.47
SMC3-201ENST00000361804 PPP6R2O75170 966 aa12.12□□□□□ -0.47
SMC3-201ENST00000361804 ST5P78524 1137 aa12.12□□□□□ -0.47
SMC3-201ENST00000361804 LINC00116Q8NCU8 138 aa12.12□□□□□ -0.47
SMC3-201ENST00000361804 ANKRD18BA2A2Z9 1011 aa12.12□□□□□ -0.47
SMC3-201ENST00000361804 PDE8BO95263 885 aa12.12□□□□□ -0.47
SMC3-201ENST00000361804 ARID4AP29374 1257 aaPredicted RBP12.12□□□□□ -0.47
SMC3-201ENST00000361804 BCAMP50895 628 aa12.12□□□□□ -0.47
SMC3-201ENST00000361804 ZNF512BQ96KM6 892 aaPredicted RBP12.12□□□□□ -0.47
SMC3-201ENST00000361804 CSRNP2Q9H175 543 aa12.12□□□□□ -0.47
SMC3-201ENST00000361804 VPS54Q9P1Q0 977 aa12.12□□□□□ -0.47
SMC3-201ENST00000361804 FBXO2Q9UK22 296 aaPredicted RBP12.12□□□□□ -0.47
SMC3-201ENST00000361804 ADAMTSL1Q8N6G6 1762 aa12.12□□□□□ -0.47
SMC3-201ENST00000361804 DUOX1Q9NRD9 1551 aa12.12□□□□□ -0.47
SMC3-201ENST00000361804 MINDY4BA8MYZ0 360 aa12.12□□□□□ -0.47
SMC3-201ENST00000361804 CD44P16070 742 aaKnown RBP12.12□□□□□ -0.47
SMC3-201ENST00000361804 LRRFIP1Q32MZ4 808 aaKnown RBP12.12□□□□□ -0.47
SMC3-201ENST00000361804 ZFP91Q96JP5 570 aaPredicted RBP12.12□□□□□ -0.47
SMC3-201ENST00000361804 NOL10Q9BSC4 688 aaKnown RBP12.12□□□□□ -0.47
SMC3-201ENST00000361804 ADAMTS3O15072 1205 aa12.11□□□□□ -0.47
SMC3-201ENST00000361804 CDC25AP30304 524 aa12.11□□□□□ -0.47
SMC3-201ENST00000361804 CRKLP46109 303 aaKnown RBP12.11□□□□□ -0.47
SMC3-201ENST00000361804 GSG1L2A8MUP6 293 aa12.11□□□□□ -0.47
SMC3-201ENST00000361804 TDO2P48775 406 aa12.11□□□□□ -0.47
SMC3-201ENST00000361804 PUF60Q9UHX1 559 aaKnown RBP12.11□□□□□ -0.47
SMC3-201ENST00000361804 KIF2AO00139 706 aaPredicted RBP12.11□□□□□ -0.47
SMC3-201ENST00000361804 NRDCO43847 1150 aa12.11□□□□□ -0.47
SMC3-201ENST00000361804 CUTAO60888 179 aa12.11□□□□□ -0.47
SMC3-201ENST00000361804 CPLX2Q6PUV4 134 aaKnown RBP12.11□□□□□ -0.47
SMC3-201ENST00000361804 JMYQ8N9B5 988 aa12.11□□□□□ -0.47
SMC3-201ENST00000361804 TIGD1Q96MW7 591 aa12.11□□□□□ -0.47
SMC3-201ENST00000361804 MMP1P03956 469 aa12.1□□□□□ -0.47
SMC3-201ENST00000361804 IL6STP40189 918 aaPredicted RBP12.1□□□□□ -0.47
SMC3-201ENST00000361804 LRRC37AA6NMS7 1700 aa12.1□□□□□ -0.47
SMC3-201ENST00000361804 EVA1CP58658 441 aa12.1□□□□□ -0.47
SMC3-201ENST00000361804 TMCO3Q6UWJ1 677 aa12.1□□□□□ -0.47
SMC3-201ENST00000361804 SPATA5Q8NB90 893 aa12.1□□□□□ -0.47
SMC3-201ENST00000361804 ACSBG1Q96GR2 724 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms