RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 TATDN1Q6P1N9 297 aa24.44■■□□□ 1.5
MRPL40-201ENST00000333130 CABP5Q9NP86 173 aa24.44■■□□□ 1.5
MRPL40-201ENST00000333130 PCNTO95613 3336 aa24.44■■□□□ 1.5
MRPL40-201ENST00000333130 VPS53Q5VIR6 699 aa24.43■■□□□ 1.5
MRPL40-201ENST00000333130 AS3MTQ9HBK9 375 aa24.43■■□□□ 1.5
MRPL40-201ENST00000333130 ZMYM6O95789 1325 aa24.43■■□□□ 1.5
MRPL40-201ENST00000333130 PHIPQ8WWQ0 1821 aa24.43■■□□□ 1.5
MRPL40-201ENST00000333130 ROBO3Q96MS0 1386 aa24.43■■□□□ 1.5
MRPL40-201ENST00000333130 CYP2D7A0A087X1C5 515 aa24.42■■□□□ 1.5
MRPL40-201ENST00000333130 HSPD1P10809 573 aaKnown RBP24.42■■□□□ 1.5
MRPL40-201ENST00000333130 PTPRAP18433 802 aa24.42■■□□□ 1.5
MRPL40-201ENST00000333130 SNAPC2Q13487 334 aa24.42■■□□□ 1.5
MRPL40-201ENST00000333130 C16orf86Q6ZW13 317 aa24.42■■□□□ 1.5
MRPL40-201ENST00000333130 ESYT1Q9BSJ8 1104 aa24.42■■□□□ 1.5
MRPL40-201ENST00000333130 ZHX2Q9Y6X8 837 aa24.42■■□□□ 1.5
MRPL40-201ENST00000333130 USP17L5A8MUK1 530 aa24.42■■□□□ 1.5
MRPL40-201ENST00000333130 GDF11O95390 407 aa24.42■■□□□ 1.5
MRPL40-201ENST00000333130 SHMT1P34896 483 aa24.42■■□□□ 1.5
MRPL40-201ENST00000333130 ALX1Q15699 326 aa24.42■■□□□ 1.5
MRPL40-201ENST00000333130 ABCB5Q2M3G0 1257 aa24.42■■□□□ 1.5
MRPL40-201ENST00000333130 CNKSR2Q8WXI2 1034 aa24.42■■□□□ 1.5
MRPL40-201ENST00000333130 MKNK2Q9HBH9 465 aa24.42■■□□□ 1.5
MRPL40-201ENST00000333130 ZBTB21Q9ULJ3 1066 aa24.42■■□□□ 1.5
MRPL40-201ENST00000333130 PTPRFP10586 1907 aa24.41■■□□□ 1.5
MRPL40-201ENST00000333130 CETPP11597 493 aa24.41■■□□□ 1.5
MRPL40-201ENST00000333130 GJA5P36382 358 aa24.41■■□□□ 1.5
MRPL40-201ENST00000333130 CDK8P49336 464 aa24.41■■□□□ 1.5
MRPL40-201ENST00000333130 PDE4BQ07343 736 aa24.41■■□□□ 1.5
MRPL40-201ENST00000333130 OTUD7BQ6GQQ9 843 aa24.41■■□□□ 1.5
MRPL40-201ENST00000333130 DYNLL2Q96FJ2 89 aa24.41■■□□□ 1.5
MRPL40-201ENST00000333130 CCDC17Q96LX7 622 aa24.41■■□□□ 1.5
MRPL40-201ENST00000333130 MPHOSPH10O00566 681 aaKnown RBP24.4■■□□□ 1.5
MRPL40-201ENST00000333130 IRF6O14896 467 aa24.4■■□□□ 1.5
MRPL40-201ENST00000333130 CA12O43570 354 aa24.4■■□□□ 1.5
MRPL40-201ENST00000333130 PPARAQ07869 468 aa24.4■■□□□ 1.5
MRPL40-201ENST00000333130 DSCC1Q9BVC3 393 aa24.4■■□□□ 1.5
MRPL40-201ENST00000333130 CXCL11O14625 94 aa24.39■■□□□ 1.49
MRPL40-201ENST00000333130 GH2P01242 217 aa24.39■■□□□ 1.49
MRPL40-201ENST00000333130 SLC44A5Q8NCS7 719 aa24.39■■□□□ 1.49
MRPL40-201ENST00000333130 ZIC5Q96T25 663 aa24.39■■□□□ 1.49
MRPL40-201ENST00000333130 CCL15-CCL14A0A0B4J2E2 113 aa24.38■■□□□ 1.49
MRPL40-201ENST00000333130 ALDH1A1P00352 501 aa24.38■■□□□ 1.49
MRPL40-201ENST00000333130 TM4SF4P48230 202 aa24.38■■□□□ 1.49
MRPL40-201ENST00000333130 EVX2Q03828 476 aa24.38■■□□□ 1.49
MRPL40-201ENST00000333130 RAB3GAP1Q15042 981 aa24.38■■□□□ 1.49
MRPL40-201ENST00000333130 CCL15Q16663 113 aa24.38■■□□□ 1.49
MRPL40-201ENST00000333130 CTNNA3Q9UI47 895 aa24.38■■□□□ 1.49
MRPL40-201ENST00000333130 KCNH4Q9UQ05 1017 aa24.38■■□□□ 1.49
MRPL40-201ENST00000333130 FGAP02671 866 aa24.37■■□□□ 1.49
MRPL40-201ENST00000333130 RRP1BQ14684 758 aaKnown RBP24.37■■□□□ 1.49
MRPL40-201ENST00000333130 KIAA1211Q6ZU35 1233 aa24.37■■□□□ 1.49
MRPL40-201ENST00000333130 TMEM179Q6ZVK1 233 aa24.37■■□□□ 1.49
MRPL40-201ENST00000333130 ZNF280CQ8ND82 737 aa24.37■■□□□ 1.49
MRPL40-201ENST00000333130 WBP1LQ9NX94 342 aa24.37■■□□□ 1.49
MRPL40-201ENST00000333130 AFG3L2Q9Y4W6 797 aa24.37■■□□□ 1.49
MRPL40-201ENST00000333130 TRIM75PA6NK02 468 aa24.36■■□□□ 1.49
MRPL40-201ENST00000333130 ZNF444Q8N0Y2 327 aaPredicted RBP24.36■■□□□ 1.49
MRPL40-201ENST00000333130 STK11IPQ8N1F8 1099 aa24.36■■□□□ 1.49
MRPL40-201ENST00000333130 HSPA1AP0DMV8 641 aaKnown RBP24.35■■□□□ 1.49
MRPL40-201ENST00000333130 HSPA1BP0DMV9 641 aaKnown RBP24.35■■□□□ 1.49
MRPL40-201ENST00000333130 FASTKD5Q7L8L6 764 aaKnown RBP24.35■■□□□ 1.49
MRPL40-201ENST00000333130 MS4A4AQ96JQ5 239 aa24.35■■□□□ 1.49
MRPL40-201ENST00000333130 WDR18Q9BV38 432 aa24.35■■□□□ 1.49
MRPL40-201ENST00000333130 SAGE1Q9NXZ1 904 aa24.35■■□□□ 1.49
MRPL40-201ENST00000333130 ANAPC4Q9UJX5 808 aa24.35■■□□□ 1.49
MRPL40-201ENST00000333130 TESPA1A2RU30 521 aaPredicted RBP24.34■■□□□ 1.49
MRPL40-201ENST00000333130 IFNL1Q8IU54 200 aa24.34■■□□□ 1.49
MRPL40-201ENST00000333130 LSG1Q9H089 658 aaKnown RBP24.34■■□□□ 1.49
MRPL40-201ENST00000333130 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.34■■□□□ 1.49
MRPL40-201ENST00000333130 ZNF213O14771 459 aa24.33■■□□□ 1.49
MRPL40-201ENST00000333130 PCP11498 1178 aaKnown RBP24.33■■□□□ 1.49
MRPL40-201ENST00000333130 PTH1RQ03431 593 aa24.33■■□□□ 1.49
MRPL40-201ENST00000333130 SPP2Q13103 211 aa24.33■■□□□ 1.49
MRPL40-201ENST00000333130 IMMTQ16891 758 aaKnown RBP24.33■■□□□ 1.49
MRPL40-201ENST00000333130 CCDC84Q86UT8 332 aaPredicted RBP24.33■■□□□ 1.49
MRPL40-201ENST00000333130 FEZ1Q99689 392 aa24.33■■□□□ 1.49
MRPL40-201ENST00000333130 LOC285556D6RIA3 1793 aa24.32■■□□□ 1.48
MRPL40-201ENST00000333130 A0A0G2JLL6 359 aaPredicted RBP24.32■■□□□ 1.48
MRPL40-201ENST00000333130 SMIM22K7EJ46 135 aa24.32■■□□□ 1.48
MRPL40-201ENST00000333130 PRRT2Q7Z6L0 340 aaPredicted RBP24.32■■□□□ 1.48
MRPL40-201ENST00000333130 BRI3BPQ8WY22 251 aa24.32■■□□□ 1.48
MRPL40-201ENST00000333130 MAP4K1Q92918 833 aa24.32■■□□□ 1.48
MRPL40-201ENST00000333130 RNF41Q9H4P4 317 aaPredicted RBP24.32■■□□□ 1.48
MRPL40-201ENST00000333130 ZCCHC17Q9NP64 241 aaKnown RBP24.32■■□□□ 1.48
MRPL40-201ENST00000333130 TMOD4Q9NZQ9 345 aa24.32■■□□□ 1.48
MRPL40-201ENST00000333130 C19orf81C9J6K1 198 aa24.31■■□□□ 1.48
MRPL40-201ENST00000333130 USP17L10C9JJH3 530 aa24.31■■□□□ 1.48
MRPL40-201ENST00000333130 AKR1B1P15121 316 aa24.31■■□□□ 1.48
MRPL40-201ENST00000333130 RASA1P20936 1047 aa24.31■■□□□ 1.48
MRPL40-201ENST00000333130 CTDSPL2Q05D32 466 aa24.31■■□□□ 1.48
MRPL40-201ENST00000333130 GADL1Q6ZQY3 521 aa24.31■■□□□ 1.48
MRPL40-201ENST00000333130 SH2D4AQ9H788 454 aa24.31■■□□□ 1.48
MRPL40-201ENST00000333130 ARHGEF10LQ9HCE6 1279 aa24.31■■□□□ 1.48
MRPL40-201ENST00000333130 TOMM22Q9NS69 142 aa24.31■■□□□ 1.48
MRPL40-201ENST00000333130 GREB1LQ9C091 1923 aaPredicted RBP24.31■■□□□ 1.48
MRPL40-201ENST00000333130 PRDM1O75626 825 aa24.3■■□□□ 1.48
MRPL40-201ENST00000333130 TRPA1O75762 1119 aa24.3■■□□□ 1.48
MRPL40-201ENST00000333130 TSPY3P0CV98 308 aa24.3■■□□□ 1.48
MRPL40-201ENST00000333130 TSPY8P0CW00 308 aa24.3■■□□□ 1.48
MRPL40-201ENST00000333130 USP14P54578 494 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms