RNA–Protein interactions for RNA: ENST00000603633.2

LINC00221-201, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-201ENST00000603633 USP17L12C9JPN9 530 aa18.74■□□□□ 0.59
LINC00221-201ENST00000603633 USP17L21D6R901 530 aa18.74■□□□□ 0.59
LINC00221-201ENST00000603633 CTNND1O60716 968 aaKnown RBP18.74■□□□□ 0.59
LINC00221-201ENST00000603633 CHMLP26374 656 aa18.74■□□□□ 0.59
LINC00221-201ENST00000603633 TDO2P48775 406 aa18.74■□□□□ 0.59
LINC00221-201ENST00000603633 CASC1Q6TDU7 716 aa18.74■□□□□ 0.59
LINC00221-201ENST00000603633 SKAP1Q86WV1 359 aa18.74■□□□□ 0.59
LINC00221-201ENST00000603633 IFNL3Q8IZI9 196 aa18.74■□□□□ 0.59
LINC00221-201ENST00000603633 NAPBQ9H115 298 aa18.74■□□□□ 0.59
LINC00221-201ENST00000603633 PHF20L1A8MW92 1017 aa18.73■□□□□ 0.59
LINC00221-201ENST00000603633 PLCD1P51178 756 aa18.73■□□□□ 0.59
LINC00221-201ENST00000603633 C12orf60Q5U649 245 aa18.73■□□□□ 0.59
LINC00221-201ENST00000603633 CTR9Q6PD62 1173 aa18.73■□□□□ 0.59
LINC00221-201ENST00000603633 CCDC129Q6ZRS4 1044 aa18.73■□□□□ 0.59
LINC00221-201ENST00000603633 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.73■□□□□ 0.59
LINC00221-201ENST00000603633 GINM1Q9NU53 330 aa18.73■□□□□ 0.59
LINC00221-201ENST00000603633 SWAP70Q9UH65 585 aa18.73■□□□□ 0.59
LINC00221-201ENST00000603633 PAPPA2Q9BXP8 1791 aa18.73■□□□□ 0.59
LINC00221-201ENST00000603633 NOGQ13253 232 aa18.73■□□□□ 0.59
LINC00221-201ENST00000603633 VGLL4Q14135 290 aa18.73■□□□□ 0.59
LINC00221-201ENST00000603633 ALX1Q15699 326 aa18.73■□□□□ 0.59
LINC00221-201ENST00000603633 NOL9Q5SY16 702 aaKnown RBP18.73■□□□□ 0.59
LINC00221-201ENST00000603633 CAPNS2Q96L46 248 aa18.73■□□□□ 0.59
LINC00221-201ENST00000603633 CYP4F22Q6NT55 531 aa18.72■□□□□ 0.59
LINC00221-201ENST00000603633 ZNF589Q86UQ0 364 aaPredicted RBP18.72■□□□□ 0.59
LINC00221-201ENST00000603633 DNAJC5GQ8N7S2 189 aa18.72■□□□□ 0.59
LINC00221-201ENST00000603633 ZNF287Q9HBT7 754 aa18.72■□□□□ 0.59
LINC00221-201ENST00000603633 PICK1Q9NRD5 415 aa18.72■□□□□ 0.59
LINC00221-201ENST00000603633 ECM29Q5VYK3 1845 aa18.71■□□□□ 0.59
LINC00221-201ENST00000603633 SLC3A2P08195 630 aaKnown RBP18.71■□□□□ 0.59
LINC00221-201ENST00000603633 SLC10A3P09131 477 aa18.71■□□□□ 0.59
LINC00221-201ENST00000603633 ZBTB48P10074 688 aaPredicted RBP18.71■□□□□ 0.59
LINC00221-201ENST00000603633 HSPD1P10809 573 aaKnown RBP18.71■□□□□ 0.59
LINC00221-201ENST00000603633 INPP5BP32019 993 aa18.71■□□□□ 0.59
LINC00221-201ENST00000603633 MAP2K2P36507 400 aa18.71■□□□□ 0.59
LINC00221-201ENST00000603633 GABPAQ06546 454 aa18.71■□□□□ 0.59
LINC00221-201ENST00000603633 SLC4A8Q2Y0W8 1093 aa18.71■□□□□ 0.59
LINC00221-201ENST00000603633 ERO1BQ86YB8 467 aa18.71■□□□□ 0.59
LINC00221-201ENST00000603633 SCYL3Q8IZE3 742 aa18.71■□□□□ 0.59
LINC00221-201ENST00000603633 ZKSCAN4Q969J2 545 aaPredicted RBP18.71■□□□□ 0.59
LINC00221-201ENST00000603633 EPB41L4AQ9HCS5 686 aaPredicted RBP18.71■□□□□ 0.59
LINC00221-201ENST00000603633 WDR33Q9C0J8 1336 aaKnown RBP18.71■□□□□ 0.59
LINC00221-201ENST00000603633 VEGFBP49765 207 aa18.7■□□□□ 0.58
LINC00221-201ENST00000603633 TATDN1Q6P1N9 297 aa18.7■□□□□ 0.58
LINC00221-201ENST00000603633 RASAL3Q86YV0 1011 aa18.7■□□□□ 0.58
LINC00221-201ENST00000603633 REM2Q8IYK8 340 aaPredicted RBP18.7■□□□□ 0.58
LINC00221-201ENST00000603633 CLMNQ96JQ2 1002 aa18.7■□□□□ 0.58
LINC00221-201ENST00000603633 DSCC1Q9BVC3 393 aa18.7■□□□□ 0.58
LINC00221-201ENST00000603633 ELP3Q9H9T3 547 aa18.7■□□□□ 0.58
LINC00221-201ENST00000603633 MINDY4BA8MYZ0 360 aa18.69■□□□□ 0.58
LINC00221-201ENST00000603633 CAP2P40123 477 aa18.69■□□□□ 0.58
LINC00221-201ENST00000603633 TBC1D2Q9BYX2 928 aa18.69■□□□□ 0.58
LINC00221-201ENST00000603633 SNCAIPQ9Y6H5 919 aa18.69■□□□□ 0.58
LINC00221-201ENST00000603633 ZMYM6O95789 1325 aa18.69■□□□□ 0.58
LINC00221-201ENST00000603633 SPDYE5A6NIY4 337 aa18.69■□□□□ 0.58
LINC00221-201ENST00000603633 FAM196BA6NMK8 535 aa18.69■□□□□ 0.58
LINC00221-201ENST00000603633 SGSM2O43147 1006 aa18.69■□□□□ 0.58
LINC00221-201ENST00000603633 CDC45O75419 566 aa18.69■□□□□ 0.58
LINC00221-201ENST00000603633 ASNSP08243 561 aa18.69■□□□□ 0.58
LINC00221-201ENST00000603633 CYP2D6P10635 497 aa18.69■□□□□ 0.58
LINC00221-201ENST00000603633 PPATQ06203 517 aa18.69■□□□□ 0.58
LINC00221-201ENST00000603633 CERKLQ49MI3 558 aaPredicted RBP18.69■□□□□ 0.58
LINC00221-201ENST00000603633 VPS53Q5VIR6 699 aa18.69■□□□□ 0.58
LINC00221-201ENST00000603633 SPRYD7Q5W111 196 aa18.69■□□□□ 0.58
LINC00221-201ENST00000603633 C16orf86Q6ZW13 317 aa18.69■□□□□ 0.58
LINC00221-201ENST00000603633 DNAJC18Q9H819 358 aa18.69■□□□□ 0.58
LINC00221-201ENST00000603633 GTF3C3Q9Y5Q9 886 aa18.69■□□□□ 0.58
LINC00221-201ENST00000603633 FAM155AB1AL88 458 aaPredicted RBP18.68■□□□□ 0.58
LINC00221-201ENST00000603633 FGAP02671 866 aa18.68■□□□□ 0.58
LINC00221-201ENST00000603633 GRM1Q13255 1194 aa18.68■□□□□ 0.58
LINC00221-201ENST00000603633 OPTNQ96CV9 577 aa18.68■□□□□ 0.58
LINC00221-201ENST00000603633 WNK4Q96J92 1243 aa18.68■□□□□ 0.58
LINC00221-201ENST00000603633 CCDC17Q96LX7 622 aa18.68■□□□□ 0.58
LINC00221-201ENST00000603633 CABP5Q9NP86 173 aa18.68■□□□□ 0.58
LINC00221-201ENST00000603633 CTNNA3Q9UI47 895 aa18.68■□□□□ 0.58
LINC00221-201ENST00000603633 FOXP2O15409 715 aa18.67■□□□□ 0.58
LINC00221-201ENST00000603633 KIAA1211Q6ZU35 1233 aa18.67■□□□□ 0.58
LINC00221-201ENST00000603633 CYP2D7A0A087X1C5 515 aa18.66■□□□□ 0.58
LINC00221-201ENST00000603633 SLURP2P0DP57 97 aa18.66■□□□□ 0.58
LINC00221-201ENST00000603633 SHMT1P34896 483 aa18.66■□□□□ 0.58
LINC00221-201ENST00000603633 CDK8P49336 464 aa18.66■□□□□ 0.58
LINC00221-201ENST00000603633 INHBEP58166 350 aa18.66■□□□□ 0.58
LINC00221-201ENST00000603633 PDE4BQ07343 736 aa18.66■□□□□ 0.58
LINC00221-201ENST00000603633 PPARAQ07869 468 aa18.66■□□□□ 0.58
LINC00221-201ENST00000603633 PPIL2Q13356 520 aa18.66■□□□□ 0.58
LINC00221-201ENST00000603633 MKNK2Q9HBH9 465 aa18.66■□□□□ 0.58
LINC00221-201ENST00000603633 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.66■□□□□ 0.58
LINC00221-201ENST00000603633 ANAPC4Q9UJX5 808 aa18.66■□□□□ 0.58
LINC00221-201ENST00000603633 MANSC4A6NHS7 340 aaPredicted RBP18.66■□□□□ 0.58
LINC00221-201ENST00000603633 PTPRAP18433 802 aa18.66■□□□□ 0.58
LINC00221-201ENST00000603633 SREBF2Q12772 1141 aa18.66■□□□□ 0.58
LINC00221-201ENST00000603633 DYNLL2Q96FJ2 89 aa18.66■□□□□ 0.58
LINC00221-201ENST00000603633 AS3MTQ9HBK9 375 aa18.66■□□□□ 0.58
LINC00221-201ENST00000603633 POLR2AP24928 1970 aaKnown RBP18.65■□□□□ 0.58
LINC00221-201ENST00000603633 USP17L5A8MUK1 530 aa18.65■□□□□ 0.58
LINC00221-201ENST00000603633 GTF2A2P52657 109 aa18.65■□□□□ 0.58
LINC00221-201ENST00000603633 ABCB5Q2M3G0 1257 aa18.65■□□□□ 0.58
LINC00221-201ENST00000603633 OTUD5Q96G74 571 aa18.65■□□□□ 0.58
LINC00221-201ENST00000603633 ESYT1Q9BSJ8 1104 aa18.65■□□□□ 0.58
LINC00221-201ENST00000603633 ZHX2Q9Y6X8 837 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms