RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 ATRNL1Q5VV63 1379 aa19.91■□□□□ 0.78
USHBP1-210ENST00000600286 COL2A1P02458 1487 aaPredicted RBP19.91■□□□□ 0.78
USHBP1-210ENST00000600286 MINDY4BA8MYZ0 360 aa19.9■□□□□ 0.78
USHBP1-210ENST00000600286 FOXN1O15353 648 aa19.9■□□□□ 0.78
USHBP1-210ENST00000600286 TBC1D12O60347 775 aa19.9■□□□□ 0.78
USHBP1-210ENST00000600286 SBK1Q52WX2 424 aa19.9■□□□□ 0.78
USHBP1-210ENST00000600286 DLK2Q6UY11 383 aa19.9■□□□□ 0.78
USHBP1-210ENST00000600286 SERPINB13Q9UIV8 391 aa19.9■□□□□ 0.78
USHBP1-210ENST00000600286 ANGEL1Q9UNK9 670 aaKnown RBP19.9■□□□□ 0.78
USHBP1-210ENST00000600286 TLL2Q9Y6L7 1015 aa19.9■□□□□ 0.78
USHBP1-210ENST00000600286 AK9Q5TCS8 1911 aa19.9■□□□□ 0.78
USHBP1-210ENST00000600286 CTR9Q6PD62 1173 aa19.89■□□□□ 0.77
USHBP1-210ENST00000600286 MIGA2Q7L4E1 593 aa19.89■□□□□ 0.77
USHBP1-210ENST00000600286 SH3BP5LQ7L8J4 393 aa19.89■□□□□ 0.77
USHBP1-210ENST00000600286 WDR33Q9C0J8 1336 aaKnown RBP19.89■□□□□ 0.77
USHBP1-210ENST00000600286 EHD4Q9H223 541 aa19.89■□□□□ 0.77
USHBP1-210ENST00000600286 ABT1Q9ULW3 272 aaKnown RBP19.89■□□□□ 0.77
USHBP1-210ENST00000600286 UNCXA6NJT0 531 aa19.88■□□□□ 0.77
USHBP1-210ENST00000600286 REC8O95072 547 aa19.88■□□□□ 0.77
USHBP1-210ENST00000600286 SLC4A8Q2Y0W8 1093 aa19.88■□□□□ 0.77
USHBP1-210ENST00000600286 C12orf60Q5U649 245 aa19.88■□□□□ 0.77
USHBP1-210ENST00000600286 VPS53Q5VIR6 699 aa19.88■□□□□ 0.77
USHBP1-210ENST00000600286 ANO2Q9NQ90 1003 aa19.88■□□□□ 0.77
USHBP1-210ENST00000600286 SWAP70Q9UH65 585 aa19.88■□□□□ 0.77
USHBP1-210ENST00000600286 FGAP02671 866 aa19.87■□□□□ 0.77
USHBP1-210ENST00000600286 MAP3K9P80192 1104 aa19.87■□□□□ 0.77
USHBP1-210ENST00000600286 CSADQ9Y600 493 aa19.87■□□□□ 0.77
USHBP1-210ENST00000600286 U3KPZ7 1027 aaPredicted RBP19.87■□□□□ 0.77
USHBP1-210ENST00000600286 ZMYM6O95789 1325 aa19.86■□□□□ 0.77
USHBP1-210ENST00000600286 ZNF213O14771 459 aa19.86■□□□□ 0.77
USHBP1-210ENST00000600286 USP2O75604 605 aaPredicted RBP19.86■□□□□ 0.77
USHBP1-210ENST00000600286 PLCD1P51178 756 aa19.86■□□□□ 0.77
USHBP1-210ENST00000600286 MAP3K10Q02779 954 aa19.86■□□□□ 0.77
USHBP1-210ENST00000600286 PDE4BQ07343 736 aa19.86■□□□□ 0.77
USHBP1-210ENST00000600286 IMMTQ16891 758 aaKnown RBP19.86■□□□□ 0.77
USHBP1-210ENST00000600286 SAPCD2Q86UD0 394 aa19.86■□□□□ 0.77
USHBP1-210ENST00000600286 CDAN1Q8IWY9 1227 aa19.86■□□□□ 0.77
USHBP1-210ENST00000600286 ANKRD13AQ8IZ07 590 aa19.86■□□□□ 0.77
USHBP1-210ENST00000600286 WRNIP1Q96S55 665 aa19.86■□□□□ 0.77
USHBP1-210ENST00000600286 MKNK2Q9HBH9 465 aa19.86■□□□□ 0.77
USHBP1-210ENST00000600286 EPB41L4AQ9HCS5 686 aaPredicted RBP19.86■□□□□ 0.77
USHBP1-210ENST00000600286 HUNKP57058 714 aa19.85■□□□□ 0.77
USHBP1-210ENST00000600286 PPARAQ07869 468 aa19.85■□□□□ 0.77
USHBP1-210ENST00000600286 MAP3K11Q16584 847 aa19.85■□□□□ 0.77
USHBP1-210ENST00000600286 METTL16Q86W50 562 aaKnown RBP19.85■□□□□ 0.77
USHBP1-210ENST00000600286 UBE2Q2LH0YL09 131 aa19.84■□□□□ 0.77
USHBP1-210ENST00000600286 CYP2D6P10635 497 aa19.84■□□□□ 0.77
USHBP1-210ENST00000600286 SLC10A4Q96EP9 437 aa19.84■□□□□ 0.77
USHBP1-210ENST00000600286 HHIPL1Q96JK4 782 aa19.84■□□□□ 0.77
USHBP1-210ENST00000600286 CABP5Q9NP86 173 aa19.84■□□□□ 0.77
USHBP1-210ENST00000600286 PRDM10Q9NQV6 1147 aa19.84■□□□□ 0.77
USHBP1-210ENST00000600286 PICK1Q9NRD5 415 aa19.84■□□□□ 0.77
USHBP1-210ENST00000600286 CYP2D7A0A087X1C5 515 aa19.83■□□□□ 0.77
USHBP1-210ENST00000600286 CTNND1O60716 968 aaKnown RBP19.83■□□□□ 0.77
USHBP1-210ENST00000600286 CERKLQ49MI3 558 aaPredicted RBP19.83■□□□□ 0.77
USHBP1-210ENST00000600286 CYP4F22Q6NT55 531 aa19.83■□□□□ 0.77
USHBP1-210ENST00000600286 ZNF444Q8N0Y2 327 aaPredicted RBP19.83■□□□□ 0.77
USHBP1-210ENST00000600286 MAP4K1Q92918 833 aa19.83■□□□□ 0.77
USHBP1-210ENST00000600286 CAPNS2Q96L46 248 aa19.83■□□□□ 0.77
USHBP1-210ENST00000600286 RNF41Q9H4P4 317 aaPredicted RBP19.83■□□□□ 0.77
USHBP1-210ENST00000600286 GINM1Q9NU53 330 aa19.83■□□□□ 0.77
USHBP1-210ENST00000600286 ZNF112Q9UJU3 913 aa19.83■□□□□ 0.77
USHBP1-210ENST00000600286 CDK8P49336 464 aa19.82■□□□□ 0.76
USHBP1-210ENST00000600286 RNF20Q5VTR2 975 aa19.82■□□□□ 0.76
USHBP1-210ENST00000600286 C16orf86Q6ZW13 317 aa19.82■□□□□ 0.76
USHBP1-210ENST00000600286 TNS4Q8IZW8 715 aa19.82■□□□□ 0.76
USHBP1-210ENST00000600286 CCDC17Q96LX7 622 aa19.82■□□□□ 0.76
USHBP1-210ENST00000600286 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.82■□□□□ 0.76
USHBP1-210ENST00000600286 ANAPC4Q9UJX5 808 aa19.82■□□□□ 0.76
USHBP1-210ENST00000600286 PCP11498 1178 aaKnown RBP19.81■□□□□ 0.76
USHBP1-210ENST00000600286 PTH1RQ03431 593 aa19.81■□□□□ 0.76
USHBP1-210ENST00000600286 GABPAQ06546 454 aa19.81■□□□□ 0.76
USHBP1-210ENST00000600286 LDLRAD1Q5T700 205 aa19.81■□□□□ 0.76
USHBP1-210ENST00000600286 PAXIP1Q6ZW49 1069 aaPredicted RBP19.81■□□□□ 0.76
USHBP1-210ENST00000600286 MOB2Q70IA6 237 aa19.81■□□□□ 0.76
USHBP1-210ENST00000600286 STK11IPQ8N1F8 1099 aa19.81■□□□□ 0.76
USHBP1-210ENST00000600286 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.81■□□□□ 0.76
USHBP1-210ENST00000600286 DYNLL2Q96FJ2 89 aa19.81■□□□□ 0.76
USHBP1-210ENST00000600286 IL25Q9H293 177 aa19.81■□□□□ 0.76
USHBP1-210ENST00000600286 TOMM22Q9NS69 142 aa19.81■□□□□ 0.76
USHBP1-210ENST00000600286 FAM196BA6NMK8 535 aa19.8■□□□□ 0.76
USHBP1-210ENST00000600286 MPHOSPH10O00566 681 aaKnown RBP19.8■□□□□ 0.76
USHBP1-210ENST00000600286 FOXP2O15409 715 aa19.8■□□□□ 0.76
USHBP1-210ENST00000600286 EPB41L2O43491 1005 aaKnown RBP19.8■□□□□ 0.76
USHBP1-210ENST00000600286 HSPA8P11142 646 aaKnown RBP19.8■□□□□ 0.76
USHBP1-210ENST00000600286 MCCP23508 829 aa19.8■□□□□ 0.76
USHBP1-210ENST00000600286 NT5C2P49902 561 aa19.8■□□□□ 0.76
USHBP1-210ENST00000600286 ZNF157P51786 506 aaPredicted RBP19.8■□□□□ 0.76
USHBP1-210ENST00000600286 RGMBQ6NW40 437 aa19.8■□□□□ 0.76
USHBP1-210ENST00000600286 TATDN1Q6P1N9 297 aa19.8■□□□□ 0.76
USHBP1-210ENST00000600286 MFSD6Q6ZSS7 791 aa19.8■□□□□ 0.76
USHBP1-210ENST00000600286 CCDC102AQ96A19 550 aa19.8■□□□□ 0.76
USHBP1-210ENST00000600286 LSG1Q9H089 658 aaKnown RBP19.8■□□□□ 0.76
USHBP1-210ENST00000600286 FZD1Q9UP38 647 aa19.8■□□□□ 0.76
USHBP1-210ENST00000600286 RBM8AQ9Y5S9 174 aaKnown RBP19.8■□□□□ 0.76
USHBP1-210ENST00000600286 PHF20L1A8MW92 1017 aa19.79■□□□□ 0.76
USHBP1-210ENST00000600286 ASNSP08243 561 aa19.79■□□□□ 0.76
USHBP1-210ENST00000600286 INPP5BP32019 993 aa19.79■□□□□ 0.76
USHBP1-210ENST00000600286 CAP2P40123 477 aa19.79■□□□□ 0.76
USHBP1-210ENST00000600286 ECE1P42892 770 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms