RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 CDK5RAP2Q96SN8 1893 aa18.97■□□□□ 0.63
IFT20-216ENST00000588477 TBC1D12O60347 775 aa18.97■□□□□ 0.63
IFT20-216ENST00000588477 GCLCP48506 637 aaPredicted RBP18.97■□□□□ 0.63
IFT20-216ENST00000588477 TIMM10P62072 90 aa18.97■□□□□ 0.63
IFT20-216ENST00000588477 SPTY2D1Q68D10 685 aaPredicted RBP18.97■□□□□ 0.63
IFT20-216ENST00000588477 DEFB123Q8N688 67 aa18.97■□□□□ 0.63
IFT20-216ENST00000588477 NBPF3Q9H094 633 aa18.97■□□□□ 0.63
IFT20-216ENST00000588477 OSBPL5Q9H0X9 879 aaPredicted RBP18.97■□□□□ 0.63
IFT20-216ENST00000588477 GJD2Q9UKL4 321 aa18.97■□□□□ 0.63
IFT20-216ENST00000588477 ZBTB22O15209 634 aa18.96■□□□□ 0.63
IFT20-216ENST00000588477 MNX1P50219 401 aaPredicted RBP18.96■□□□□ 0.63
IFT20-216ENST00000588477 HMGCS2P54868 508 aa18.96■□□□□ 0.63
IFT20-216ENST00000588477 GPR153Q6NV75 609 aa18.96■□□□□ 0.63
IFT20-216ENST00000588477 Q7L0L9 218 aa18.96■□□□□ 0.63
IFT20-216ENST00000588477 ZNF280CQ8ND82 737 aa18.96■□□□□ 0.63
IFT20-216ENST00000588477 FRMPD3Q5JV73 1810 aa18.95■□□□□ 0.62
IFT20-216ENST00000588477 GPR75-ASB3A0A0A6YYF3 556 aa18.95■□□□□ 0.62
IFT20-216ENST00000588477 RHBDL3P58872 404 aa18.95■□□□□ 0.62
IFT20-216ENST00000588477 MECOMQ03112 1051 aa18.95■□□□□ 0.62
IFT20-216ENST00000588477 PABPC4Q13310 644 aaKnown RBP eCLIP18.95■□□□□ 0.62
IFT20-216ENST00000588477 ERICH6Q7L0X2 663 aa18.95■□□□□ 0.62
IFT20-216ENST00000588477 ASCC2Q9H1I8 757 aaPredicted RBP18.95■□□□□ 0.62
IFT20-216ENST00000588477 C11orf49Q9H6J7 331 aa18.95■□□□□ 0.62
IFT20-216ENST00000588477 SIPA1L1O43166 1804 aa18.95■□□□□ 0.62
IFT20-216ENST00000588477 MAGEA10P43363 369 aaPredicted RBP18.94■□□□□ 0.62
IFT20-216ENST00000588477 PDS5AQ29RF7 1337 aaKnown RBP18.94■□□□□ 0.62
IFT20-216ENST00000588477 MYO5AQ9Y4I1 1855 aaKnown RBP18.93■□□□□ 0.62
IFT20-216ENST00000588477 CYP2B6P20813 491 aa18.93■□□□□ 0.62
IFT20-216ENST00000588477 CAP2P40123 477 aa18.93■□□□□ 0.62
IFT20-216ENST00000588477 LRIT3Q3SXY7 679 aa18.93■□□□□ 0.62
IFT20-216ENST00000588477 TDHQ8IZJ6 230 aa18.93■□□□□ 0.62
IFT20-216ENST00000588477 ZNF384Q8TF68 577 aa18.93■□□□□ 0.62
IFT20-216ENST00000588477 TRIB2Q92519 343 aa18.93■□□□□ 0.62
IFT20-216ENST00000588477 TBC1D2Q9BYX2 928 aa18.93■□□□□ 0.62
IFT20-216ENST00000588477 COPRSQ9NQ92 184 aa18.93■□□□□ 0.62
IFT20-216ENST00000588477 FOCADQ5VW36 1801 aa18.93■□□□□ 0.62
IFT20-216ENST00000588477 A0A1B0GUL7 405 aa18.92■□□□□ 0.62
IFT20-216ENST00000588477 USP17L5A8MUK1 530 aa18.92■□□□□ 0.62
IFT20-216ENST00000588477 NPM3O75607 178 aaKnown RBP18.92■□□□□ 0.62
IFT20-216ENST00000588477 RRP1BQ14684 758 aaKnown RBP18.92■□□□□ 0.62
IFT20-216ENST00000588477 ALDH1L2Q3SY69 923 aa18.92■□□□□ 0.62
IFT20-216ENST00000588477 XAGE2Q96GT9 111 aa18.92■□□□□ 0.62
IFT20-216ENST00000588477 OGDHLQ9ULD0 1010 aa18.92■□□□□ 0.62
IFT20-216ENST00000588477 DNAH12Q6ZR08 3092 aa18.92■□□□□ 0.62
IFT20-216ENST00000588477 E9PSI1 815 aa18.91■□□□□ 0.62
IFT20-216ENST00000588477 SH3D19Q5HYK7 790 aa18.91■□□□□ 0.62
IFT20-216ENST00000588477 UBE2OQ9C0C9 1292 aaKnown RBP18.91■□□□□ 0.62
IFT20-216ENST00000588477 AS3MTQ9HBK9 375 aa18.91■□□□□ 0.62
IFT20-216ENST00000588477 SMC4Q9NTJ3 1288 aa18.91■□□□□ 0.62
IFT20-216ENST00000588477 STXBP5LQ9Y2K9 1186 aa18.91■□□□□ 0.62
IFT20-216ENST00000588477 UNC80Q8N2C7 3258 aa18.91■□□□□ 0.62
IFT20-216ENST00000588477 COL2A1P02458 1487 aaPredicted RBP18.9■□□□□ 0.62
IFT20-216ENST00000588477 LDHCP07864 332 aa18.9■□□□□ 0.62
IFT20-216ENST00000588477 TFCP2Q12800 502 aa18.9■□□□□ 0.62
IFT20-216ENST00000588477 NSUN4Q96CB9 384 aaKnown RBP18.9■□□□□ 0.62
IFT20-216ENST00000588477 MTMR10Q9NXD2 777 aa18.9■□□□□ 0.62
IFT20-216ENST00000588477 MORF4L1Q9UBU8 362 aa18.9■□□□□ 0.62
IFT20-216ENST00000588477 AKAP2Q9Y2D5 859 aa18.9■□□□□ 0.62
IFT20-216ENST00000588477 PFASO15067 1338 aa18.9■□□□□ 0.62
IFT20-216ENST00000588477 PEX10O60683 326 aa18.89■□□□□ 0.61
IFT20-216ENST00000588477 PRKAR2AP13861 404 aaKnown RBP18.89■□□□□ 0.61
IFT20-216ENST00000588477 IRX3P78415 501 aaPredicted RBP18.89■□□□□ 0.61
IFT20-216ENST00000588477 GSTO1P78417 241 aa18.89■□□□□ 0.61
IFT20-216ENST00000588477 MVPQ14764 893 aaKnown RBP18.89■□□□□ 0.61
IFT20-216ENST00000588477 MAP3K21Q5TCX8 1036 aa18.89■□□□□ 0.61
IFT20-216ENST00000588477 PI16Q6UXB8 463 aa18.89■□□□□ 0.61
IFT20-216ENST00000588477 TBC1D9Q6ZT07 1266 aa18.89■□□□□ 0.61
IFT20-216ENST00000588477 NEUROD6Q96NK8 337 aa18.89■□□□□ 0.61
IFT20-216ENST00000588477 P2RX7Q99572 595 aaKnown RBP18.89■□□□□ 0.61
IFT20-216ENST00000588477 NUDT12Q9BQG2 462 aa18.89■□□□□ 0.61
IFT20-216ENST00000588477 HMG20BQ9P0W2 317 aa18.89■□□□□ 0.61
IFT20-216ENST00000588477 HDAC5Q9UQL6 1122 aa18.89■□□□□ 0.61
IFT20-216ENST00000588477 MAP4K4O95819 1239 aaPredicted RBP18.88■□□□□ 0.61
IFT20-216ENST00000588477 SLFN5Q08AF3 891 aa18.88■□□□□ 0.61
IFT20-216ENST00000588477 MTMR2Q13614 643 aa18.88■□□□□ 0.61
IFT20-216ENST00000588477 RAI14Q9P0K7 980 aa18.88■□□□□ 0.61
IFT20-216ENST00000588477 HERC5Q9UII4 1024 aaKnown RBP18.88■□□□□ 0.61
IFT20-216ENST00000588477 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.88■□□□□ 0.61
IFT20-216ENST00000588477 MYH1P12882 1939 aa18.88■□□□□ 0.61
IFT20-216ENST00000588477 LAMA2P24043 3122 aaKnown RBP18.87■□□□□ 0.61
IFT20-216ENST00000588477 TEX11Q8IYF3 940 aa18.87■□□□□ 0.61
IFT20-216ENST00000588477 SPATA5Q8NB90 893 aa18.87■□□□□ 0.61
IFT20-216ENST00000588477 GPRC5AQ8NFJ5 357 aa18.87■□□□□ 0.61
IFT20-216ENST00000588477 MEIS3Q99687 375 aa18.87■□□□□ 0.61
IFT20-216ENST00000588477 TXNRD2Q9NNW7 524 aa18.87■□□□□ 0.61
IFT20-216ENST00000588477 TMOD4Q9NZQ9 345 aa18.87■□□□□ 0.61
IFT20-216ENST00000588477 NOB1Q9ULX3 412 aaKnown RBP18.87■□□□□ 0.61
IFT20-216ENST00000588477 XRCC5P13010 732 aaKnown RBP18.86■□□□□ 0.61
IFT20-216ENST00000588477 HOXA7P31268 230 aaPredicted RBP18.86■□□□□ 0.61
IFT20-216ENST00000588477 BACE1P56817 501 aa18.86■□□□□ 0.61
IFT20-216ENST00000588477 HERVK_113P62684 666 aa18.86■□□□□ 0.61
IFT20-216ENST00000588477 CACNB2Q08289 660 aaPredicted RBP18.86■□□□□ 0.61
IFT20-216ENST00000588477 GORABQ5T7V8 394 aa18.86■□□□□ 0.61
IFT20-216ENST00000588477 SOCS4Q8WXH5 440 aa18.86■□□□□ 0.61
IFT20-216ENST00000588477 WDR18Q9BV38 432 aa18.86■□□□□ 0.61
IFT20-216ENST00000588477 PI4KBQ9UBF8 816 aa18.86■□□□□ 0.61
IFT20-216ENST00000588477 CUL9Q8IWT3 2517 aa18.86■□□□□ 0.61
IFT20-216ENST00000588477 MAST2Q6P0Q8 1798 aa18.86■□□□□ 0.61
IFT20-216ENST00000588477 COL6A1P12109 1028 aa18.85■□□□□ 0.61
IFT20-216ENST00000588477 MDM2Q00987 491 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms