RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 GCLCP48506 637 aaPredicted RBP17.87■□□□□ 0.45
CSNK1D-213ENST00000580446 KCNQ1P51787 676 aa17.87■□□□□ 0.45
CSNK1D-213ENST00000580446 CCDC57Q2TAC2 916 aa17.87■□□□□ 0.45
CSNK1D-213ENST00000580446 HHIPL2Q6UWX4 724 aa17.87■□□□□ 0.45
CSNK1D-213ENST00000580446 TIFAQ96CG3 184 aa17.87■□□□□ 0.45
CSNK1D-213ENST00000580446 GAS2L1Q99501 681 aaPredicted RBP17.87■□□□□ 0.45
CSNK1D-213ENST00000580446 IGFBP4P22692 258 aa17.86■□□□□ 0.45
CSNK1D-213ENST00000580446 SPP2Q13103 211 aa17.86■□□□□ 0.45
CSNK1D-213ENST00000580446 ANO1Q5XXA6 986 aa17.86■□□□□ 0.45
CSNK1D-213ENST00000580446 ZSCAN29Q8IWY8 852 aaPredicted RBP17.86■□□□□ 0.45
CSNK1D-213ENST00000580446 MYH16Q9H6N6 1097 aa17.86■□□□□ 0.45
CSNK1D-213ENST00000580446 FLRT1Q9NZU1 646 aa17.86■□□□□ 0.45
CSNK1D-213ENST00000580446 AK9Q5TCS8 1911 aa17.86■□□□□ 0.45
CSNK1D-213ENST00000580446 GRXCR1A8MXD5 290 aa17.85■□□□□ 0.45
CSNK1D-213ENST00000580446 RGS3P49796 1198 aa17.85■□□□□ 0.45
CSNK1D-213ENST00000580446 TMEM31Q5JXX7 168 aa17.85■□□□□ 0.45
CSNK1D-213ENST00000580446 SOCS4Q8WXH5 440 aa17.85■□□□□ 0.45
CSNK1D-213ENST00000580446 KHSRPQ92945 711 aaKnown RBP eCLIP17.85■□□□□ 0.45
CSNK1D-213ENST00000580446 PORCNQ9H237 461 aa17.85■□□□□ 0.45
CSNK1D-213ENST00000580446 MAST3O60307 1309 aa17.84■□□□□ 0.45
CSNK1D-213ENST00000580446 DDTLA6NHG4 134 aaPredicted RBP17.84■□□□□ 0.45
CSNK1D-213ENST00000580446 XRCC5P13010 732 aaKnown RBP17.84■□□□□ 0.45
CSNK1D-213ENST00000580446 SLC39A5Q6ZMH5 540 aa17.84■□□□□ 0.45
CSNK1D-213ENST00000580446 MICALL1Q8N3F8 863 aa17.84■□□□□ 0.45
CSNK1D-213ENST00000580446 USP6NLQ92738 828 aa17.84■□□□□ 0.45
CSNK1D-213ENST00000580446 FERMT2Q96AC1 680 aa17.84■□□□□ 0.45
CSNK1D-213ENST00000580446 RUNDC1Q96C34 613 aa17.84■□□□□ 0.45
CSNK1D-213ENST00000580446 MRIQ9BWK5 157 aa17.84■□□□□ 0.45
CSNK1D-213ENST00000580446 C11orf16Q9NQ32 467 aa17.84■□□□□ 0.45
CSNK1D-213ENST00000580446 DDX20Q9UHI6 824 aaKnown RBP17.84■□□□□ 0.45
CSNK1D-213ENST00000580446 ARIH1Q9Y4X5 557 aaPredicted RBP17.84■□□□□ 0.45
CSNK1D-213ENST00000580446 PTPRFP10586 1907 aa17.84■□□□□ 0.45
CSNK1D-213ENST00000580446 CHD9Q3L8U1 2897 aa17.84■□□□□ 0.45
CSNK1D-213ENST00000580446 DNM1LO00429 736 aa17.83■□□□□ 0.44
CSNK1D-213ENST00000580446 BMP1P13497 986 aa17.83■□□□□ 0.44
CSNK1D-213ENST00000580446 MRE11P49959 708 aa17.83■□□□□ 0.44
CSNK1D-213ENST00000580446 P2RX7Q99572 595 aaKnown RBP17.83■□□□□ 0.44
CSNK1D-213ENST00000580446 MORF4L1Q9UBU8 362 aa17.83■□□□□ 0.44
CSNK1D-213ENST00000580446 PHIPQ8WWQ0 1821 aa17.82■□□□□ 0.44
CSNK1D-213ENST00000580446 CTNND1O60716 968 aaKnown RBP17.82■□□□□ 0.44
CSNK1D-213ENST00000580446 RGS2P41220 211 aa17.82■□□□□ 0.44
CSNK1D-213ENST00000580446 Q3C1V9 767 aa17.82■□□□□ 0.44
CSNK1D-213ENST00000580446 AKNAD1Q5T1N1 836 aa17.82■□□□□ 0.44
CSNK1D-213ENST00000580446 PROCA1Q8NCQ7 364 aaPredicted RBP17.82■□□□□ 0.44
CSNK1D-213ENST00000580446 TRPV1Q8NER1 839 aa17.82■□□□□ 0.44
CSNK1D-213ENST00000580446 DNAAF4Q8WXU2 420 aa17.82■□□□□ 0.44
CSNK1D-213ENST00000580446 APBA2Q99767 749 aa17.82■□□□□ 0.44
CSNK1D-213ENST00000580446 STK31Q9BXU1 1019 aa17.82■□□□□ 0.44
CSNK1D-213ENST00000580446 IFT57Q9NWB7 429 aa17.82■□□□□ 0.44
CSNK1D-213ENST00000580446 TCF20Q9UGU0 1960 aaKnown RBP17.81■□□□□ 0.44
CSNK1D-213ENST00000580446 SLC4A2P04920 1241 aa17.81■□□□□ 0.44
CSNK1D-213ENST00000580446 PRDX5P30044 214 aa17.81■□□□□ 0.44
CSNK1D-213ENST00000580446 PICALMQ13492 652 aa17.81■□□□□ 0.44
CSNK1D-213ENST00000580446 CAVIN4Q5BKX8 364 aa17.81■□□□□ 0.44
CSNK1D-213ENST00000580446 MORN1Q5T089 497 aa17.81■□□□□ 0.44
CSNK1D-213ENST00000580446 GPR142Q7Z601 462 aa17.81■□□□□ 0.44
CSNK1D-213ENST00000580446 LINS1Q8NG48 757 aa17.81■□□□□ 0.44
CSNK1D-213ENST00000580446 TSR2Q969E8 191 aaKnown RBP17.81■□□□□ 0.44
CSNK1D-213ENST00000580446 PAGR1Q9BTK6 254 aa17.81■□□□□ 0.44
CSNK1D-213ENST00000580446 CYP2C19P33261 490 aa17.8■□□□□ 0.44
CSNK1D-213ENST00000580446 IRX3P78415 501 aaPredicted RBP17.8■□□□□ 0.44
CSNK1D-213ENST00000580446 TLE2Q04725 743 aa17.8■□□□□ 0.44
CSNK1D-213ENST00000580446 FKBP5Q13451 457 aaPredicted RBP17.8■□□□□ 0.44
CSNK1D-213ENST00000580446 LRRC24Q50LG9 513 aa17.8■□□□□ 0.44
CSNK1D-213ENST00000580446 NCBP3Q53F19 620 aaKnown RBP17.8■□□□□ 0.44
CSNK1D-213ENST00000580446 TRMT44Q8IYL2 757 aaKnown RBP17.8■□□□□ 0.44
CSNK1D-213ENST00000580446 GPRC5AQ8NFJ5 357 aa17.8■□□□□ 0.44
CSNK1D-213ENST00000580446 LPAR1Q92633 364 aa17.8■□□□□ 0.44
CSNK1D-213ENST00000580446 DDX4Q9NQI0 724 aaKnown RBP17.8■□□□□ 0.44
CSNK1D-213ENST00000580446 FRMPD3Q5JV73 1810 aa17.79■□□□□ 0.44
CSNK1D-213ENST00000580446 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.79■□□□□ 0.44
CSNK1D-213ENST00000580446 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.79■□□□□ 0.44
CSNK1D-213ENST00000580446 F6X3S4 739 aa17.79■□□□□ 0.44
CSNK1D-213ENST00000580446 ADCYAP1R1P41586 468 aa17.79■□□□□ 0.44
CSNK1D-213ENST00000580446 GNAI1P63096 354 aa17.79■□□□□ 0.44
CSNK1D-213ENST00000580446 FLIIQ13045 1269 aa17.79■□□□□ 0.44
CSNK1D-213ENST00000580446 RRP1BQ14684 758 aaKnown RBP17.79■□□□□ 0.44
CSNK1D-213ENST00000580446 CCDC129Q6ZRS4 1044 aa17.79■□□□□ 0.44
CSNK1D-213ENST00000580446 CCAR1Q8IX12 1150 aaKnown RBP17.79■□□□□ 0.44
CSNK1D-213ENST00000580446 ZNF280CQ8ND82 737 aa17.79■□□□□ 0.44
CSNK1D-213ENST00000580446 PBX4Q9BYU1 374 aa17.79■□□□□ 0.44
CSNK1D-213ENST00000580446 DOCK1Q14185 1865 aa17.79■□□□□ 0.44
CSNK1D-213ENST00000580446 ZEB1P37275 1124 aaPredicted RBP17.78■□□□□ 0.44
CSNK1D-213ENST00000580446 PABPC4Q13310 644 aaKnown RBP eCLIP17.78■□□□□ 0.44
CSNK1D-213ENST00000580446 METTL24Q5JXM2 366 aa17.78■□□□□ 0.44
CSNK1D-213ENST00000580446 MFSD14CQ5VZR4 134 aa17.78■□□□□ 0.44
CSNK1D-213ENST00000580446 PLEKHH3Q7Z736 793 aa17.78■□□□□ 0.44
CSNK1D-213ENST00000580446 RBPJLQ9UBG7 517 aa17.78■□□□□ 0.44
CSNK1D-213ENST00000580446 XIRP2A4UGR9 3374 aa17.77■□□□□ 0.44
CSNK1D-213ENST00000580446 DOCK2Q92608 1830 aa17.77■□□□□ 0.44
CSNK1D-213ENST00000580446 HERVK_113P62684 666 aa17.77■□□□□ 0.44
CSNK1D-213ENST00000580446 CWC22Q9HCG8 908 aaKnown RBP17.77■□□□□ 0.44
CSNK1D-213ENST00000580446 CXXC1Q9P0U4 656 aaPredicted RBP17.77■□□□□ 0.44
CSNK1D-213ENST00000580446 SUGT1Q9Y2Z0 365 aa17.77■□□□□ 0.44
CSNK1D-213ENST00000580446 LOC285556D6RIA3 1793 aa17.76■□□□□ 0.43
CSNK1D-213ENST00000580446 MAPK4P31152 587 aa17.76■□□□□ 0.43
CSNK1D-213ENST00000580446 FPGSQ05932 587 aa17.76■□□□□ 0.43
CSNK1D-213ENST00000580446 MTMR2Q13614 643 aa17.76■□□□□ 0.43
CSNK1D-213ENST00000580446 WDR78Q5VTH9 848 aa17.76■□□□□ 0.43
CSNK1D-213ENST00000580446 CCER1Q8TC90 406 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms