RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 C12orf60Q5U649 245 aa19.56■□□□□ 0.72
USB1-204ENST00000561568 RGMBQ6NW40 437 aa19.56■□□□□ 0.72
USB1-204ENST00000561568 CTR9Q6PD62 1173 aa19.56■□□□□ 0.72
USB1-204ENST00000561568 CASC1Q6TDU7 716 aa19.56■□□□□ 0.72
USB1-204ENST00000561568 CCDC102AQ96A19 550 aa19.56■□□□□ 0.72
USB1-204ENST00000561568 SLC10A4Q96EP9 437 aa19.56■□□□□ 0.72
USB1-204ENST00000561568 ARPP21Q9UBL0 812 aaPredicted RBP19.56■□□□□ 0.72
USB1-204ENST00000561568 SERPINB13Q9UIV8 391 aa19.56■□□□□ 0.72
USB1-204ENST00000561568 FZD1Q9UP38 647 aa19.56■□□□□ 0.72
USB1-204ENST00000561568 HSPD1P10809 573 aaKnown RBP19.55■□□□□ 0.72
USB1-204ENST00000561568 TDO2P48775 406 aa19.55■□□□□ 0.72
USB1-204ENST00000561568 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.55■□□□□ 0.72
USB1-204ENST00000561568 WRNIP1Q96S55 665 aa19.55■□□□□ 0.72
USB1-204ENST00000561568 NAPBQ9H115 298 aa19.55■□□□□ 0.72
USB1-204ENST00000561568 CSADQ9Y600 493 aa19.55■□□□□ 0.72
USB1-204ENST00000561568 RAD50Q92878 1312 aa19.54■□□□□ 0.72
USB1-204ENST00000561568 SSC5DA1L4H1 1573 aa19.54■□□□□ 0.72
USB1-204ENST00000561568 PHF20L1A8MW92 1017 aa19.54■□□□□ 0.72
USB1-204ENST00000561568 CTNND1O60716 968 aaKnown RBP19.54■□□□□ 0.72
USB1-204ENST00000561568 ECE1P42892 770 aa19.54■□□□□ 0.72
USB1-204ENST00000561568 ZNF157P51786 506 aaPredicted RBP19.54■□□□□ 0.72
USB1-204ENST00000561568 ZNF589Q86UQ0 364 aaPredicted RBP19.54■□□□□ 0.72
USB1-204ENST00000561568 PAPPA2Q9BXP8 1791 aa19.53■□□□□ 0.72
USB1-204ENST00000561568 HTRA3P83110 453 aa19.53■□□□□ 0.72
USB1-204ENST00000561568 SLC4A8Q2Y0W8 1093 aa19.53■□□□□ 0.72
USB1-204ENST00000561568 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.53■□□□□ 0.72
USB1-204ENST00000561568 SWAP70Q9UH65 585 aa19.53■□□□□ 0.72
USB1-204ENST00000561568 MINDY4BA8MYZ0 360 aa19.52■□□□□ 0.72
USB1-204ENST00000561568 SGSM2O43147 1006 aa19.52■□□□□ 0.72
USB1-204ENST00000561568 CDC45O75419 566 aa19.52■□□□□ 0.72
USB1-204ENST00000561568 FGAP02671 866 aa19.52■□□□□ 0.72
USB1-204ENST00000561568 GABPAQ06546 454 aa19.52■□□□□ 0.72
USB1-204ENST00000561568 VPS53Q5VIR6 699 aa19.52■□□□□ 0.72
USB1-204ENST00000561568 TATDN1Q6P1N9 297 aa19.52■□□□□ 0.72
USB1-204ENST00000561568 ZKSCAN4Q969J2 545 aaPredicted RBP19.52■□□□□ 0.72
USB1-204ENST00000561568 DSCC1Q9BVC3 393 aa19.52■□□□□ 0.72
USB1-204ENST00000561568 EPB41L4AQ9HCS5 686 aaPredicted RBP19.52■□□□□ 0.72
USB1-204ENST00000561568 FOCADQ5VW36 1801 aa19.52■□□□□ 0.72
USB1-204ENST00000561568 CDK5RAP2Q96SN8 1893 aa19.52■□□□□ 0.71
USB1-204ENST00000561568 SLC3A2P08195 630 aaKnown RBP19.51■□□□□ 0.71
USB1-204ENST00000561568 CYP2D6P10635 497 aa19.51■□□□□ 0.71
USB1-204ENST00000561568 KIAA1211Q6ZU35 1233 aa19.51■□□□□ 0.71
USB1-204ENST00000561568 PAXIP1Q6ZW49 1069 aaPredicted RBP19.51■□□□□ 0.71
USB1-204ENST00000561568 ZNF287Q9HBT7 754 aa19.51■□□□□ 0.71
USB1-204ENST00000561568 GINM1Q9NU53 330 aa19.51■□□□□ 0.71
USB1-204ENST00000561568 CTNNA3Q9UI47 895 aa19.51■□□□□ 0.71
USB1-204ENST00000561568 FAM196BA6NMK8 535 aa19.5■□□□□ 0.71
USB1-204ENST00000561568 FOXP2O15409 715 aa19.5■□□□□ 0.71
USB1-204ENST00000561568 SLURP2P0DP57 97 aa19.5■□□□□ 0.71
USB1-204ENST00000561568 INPP5BP32019 993 aa19.5■□□□□ 0.71
USB1-204ENST00000561568 CAP2P40123 477 aa19.5■□□□□ 0.71
USB1-204ENST00000561568 VGLL4Q14135 290 aa19.5■□□□□ 0.71
USB1-204ENST00000561568 NOL9Q5SY16 702 aaKnown RBP19.5■□□□□ 0.71
USB1-204ENST00000561568 MYH1P12882 1939 aa19.5■□□□□ 0.71
USB1-204ENST00000561568 CYP2D7A0A087X1C5 515 aa19.49■□□□□ 0.71
USB1-204ENST00000561568 CERKLQ49MI3 558 aaPredicted RBP19.49■□□□□ 0.71
USB1-204ENST00000561568 CYP4F22Q6NT55 531 aa19.49■□□□□ 0.71
USB1-204ENST00000561568 C16orf86Q6ZW13 317 aa19.49■□□□□ 0.71
USB1-204ENST00000561568 ERO1BQ86YB8 467 aa19.49■□□□□ 0.71
USB1-204ENST00000561568 SCYL3Q8IZE3 742 aa19.49■□□□□ 0.71
USB1-204ENST00000561568 DNAJC5GQ8N7S2 189 aa19.49■□□□□ 0.71
USB1-204ENST00000561568 CLMNQ96JQ2 1002 aa19.49■□□□□ 0.71
USB1-204ENST00000561568 CAPNS2Q96L46 248 aa19.49■□□□□ 0.71
USB1-204ENST00000561568 ESYT1Q9BSJ8 1104 aa19.49■□□□□ 0.71
USB1-204ENST00000561568 DNAJC18Q9H819 358 aa19.49■□□□□ 0.71
USB1-204ENST00000561568 PICK1Q9NRD5 415 aa19.49■□□□□ 0.71
USB1-204ENST00000561568 ZMYM6O95789 1325 aa19.49■□□□□ 0.71
USB1-204ENST00000561568 CDK8P49336 464 aa19.48■□□□□ 0.71
USB1-204ENST00000561568 PPARAQ07869 468 aa19.48■□□□□ 0.71
USB1-204ENST00000561568 DYNLL2Q96FJ2 89 aa19.48■□□□□ 0.71
USB1-204ENST00000561568 CCDC17Q96LX7 622 aa19.48■□□□□ 0.71
USB1-204ENST00000561568 ELP3Q9H9T3 547 aa19.48■□□□□ 0.71
USB1-204ENST00000561568 MKNK2Q9HBH9 465 aa19.48■□□□□ 0.71
USB1-204ENST00000561568 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.48■□□□□ 0.71
USB1-204ENST00000561568 ANAPC4Q9UJX5 808 aa19.48■□□□□ 0.71
USB1-204ENST00000561568 WDR33Q9C0J8 1336 aaKnown RBP19.48■□□□□ 0.71
USB1-204ENST00000561568 ZNF213O14771 459 aa19.47■□□□□ 0.71
USB1-204ENST00000561568 ASNSP08243 561 aa19.47■□□□□ 0.71
USB1-204ENST00000561568 SLC10A3P09131 477 aa19.47■□□□□ 0.71
USB1-204ENST00000561568 ZBTB48P10074 688 aaPredicted RBP19.47■□□□□ 0.71
USB1-204ENST00000561568 SHMT1P34896 483 aa19.47■□□□□ 0.71
USB1-204ENST00000561568 MAP2K2P36507 400 aa19.47■□□□□ 0.71
USB1-204ENST00000561568 VEGFBP49765 207 aa19.47■□□□□ 0.71
USB1-204ENST00000561568 PPATQ06203 517 aa19.47■□□□□ 0.71
USB1-204ENST00000561568 PDE4BQ07343 736 aa19.47■□□□□ 0.71
USB1-204ENST00000561568 NOGQ13253 232 aa19.47■□□□□ 0.71
USB1-204ENST00000561568 SPRYD7Q5W111 196 aa19.47■□□□□ 0.71
USB1-204ENST00000561568 IL25Q9H293 177 aa19.47■□□□□ 0.71
USB1-204ENST00000561568 CABP5Q9NP86 173 aa19.47■□□□□ 0.71
USB1-204ENST00000561568 SNCAIPQ9Y6H5 919 aa19.47■□□□□ 0.71
USB1-204ENST00000561568 SPDYE5A6NIY4 337 aa19.46■□□□□ 0.71
USB1-204ENST00000561568 FAM155AB1AL88 458 aaPredicted RBP19.46■□□□□ 0.71
USB1-204ENST00000561568 EVX2Q03828 476 aa19.46■□□□□ 0.71
USB1-204ENST00000561568 GRM1Q13255 1194 aa19.46■□□□□ 0.71
USB1-204ENST00000561568 RASAL3Q86YV0 1011 aa19.46■□□□□ 0.71
USB1-204ENST00000561568 REM2Q8IYK8 340 aaPredicted RBP19.46■□□□□ 0.71
USB1-204ENST00000561568 ZNF444Q8N0Y2 327 aaPredicted RBP19.46■□□□□ 0.71
USB1-204ENST00000561568 MAP4K1Q92918 833 aa19.46■□□□□ 0.71
USB1-204ENST00000561568 OPTNQ96CV9 577 aa19.46■□□□□ 0.71
USB1-204ENST00000561568 TBC1D2Q9BYX2 928 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms