RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 CSADQ9Y600 493 aa17.21■□□□□ 0.35
USP3-205ENST00000557884 CYP2D7A0A087X1C5 515 aa17.2■□□□□ 0.34
USP3-205ENST00000557884 GSG1L2A8MUP6 293 aa17.2■□□□□ 0.34
USP3-205ENST00000557884 FAM155AB1AL88 458 aaPredicted RBP17.2■□□□□ 0.34
USP3-205ENST00000557884 APPP05067 770 aa17.2■□□□□ 0.34
USP3-205ENST00000557884 PLCD1P51178 756 aa17.2■□□□□ 0.34
USP3-205ENST00000557884 MAP3K10Q02779 954 aa17.2■□□□□ 0.34
USP3-205ENST00000557884 CNKSR2Q8WXI2 1034 aa17.2■□□□□ 0.34
USP3-205ENST00000557884 CCDC102AQ96A19 550 aa17.2■□□□□ 0.34
USP3-205ENST00000557884 DDRGK1Q96HY6 314 aa17.2■□□□□ 0.34
USP3-205ENST00000557884 ZIC5Q96T25 663 aa17.2■□□□□ 0.34
USP3-205ENST00000557884 HELLSQ9NRZ9 838 aa17.2■□□□□ 0.34
USP3-205ENST00000557884 ZNF112Q9UJU3 913 aa17.2■□□□□ 0.34
USP3-205ENST00000557884 PHF20L1A8MW92 1017 aa17.19■□□□□ 0.34
USP3-205ENST00000557884 CWC27Q6UX04 472 aaKnown RBP17.19■□□□□ 0.34
USP3-205ENST00000557884 TTC6Q86TZ1 520 aa17.19■□□□□ 0.34
USP3-205ENST00000557884 ZNF589Q86UQ0 364 aaPredicted RBP17.19■□□□□ 0.34
USP3-205ENST00000557884 DNAJC18Q9H819 358 aa17.19■□□□□ 0.34
USP3-205ENST00000557884 EPB41L4AQ9HCS5 686 aaPredicted RBP17.19■□□□□ 0.34
USP3-205ENST00000557884 SNCAIPQ9Y6H5 919 aa17.19■□□□□ 0.34
USP3-205ENST00000557884 USP17L12C9JPN9 530 aa17.18■□□□□ 0.34
USP3-205ENST00000557884 USP17L21D6R901 530 aa17.18■□□□□ 0.34
USP3-205ENST00000557884 SMIM22K7EJ46 135 aa17.18■□□□□ 0.34
USP3-205ENST00000557884 TBC1D12O60347 775 aa17.18■□□□□ 0.34
USP3-205ENST00000557884 GNAT2P19087 354 aa17.18■□□□□ 0.34
USP3-205ENST00000557884 GJA5P36382 358 aa17.18■□□□□ 0.34
USP3-205ENST00000557884 TDO2P48775 406 aa17.18■□□□□ 0.34
USP3-205ENST00000557884 RRP1BQ14684 758 aaKnown RBP17.18■□□□□ 0.34
USP3-205ENST00000557884 MCMDC2Q4G0Z9 681 aa17.18■□□□□ 0.34
USP3-205ENST00000557884 TICAM2Q86XR7 235 aa17.18■□□□□ 0.34
USP3-205ENST00000557884 FOXP4Q8IVH2 680 aaPredicted RBP17.18■□□□□ 0.34
USP3-205ENST00000557884 WNK4Q96J92 1243 aa17.18■□□□□ 0.34
USP3-205ENST00000557884 HERC5Q9UII4 1024 aaKnown RBP17.18■□□□□ 0.34
USP3-205ENST00000557884 UNCXA6NJT0 531 aa17.17■□□□□ 0.34
USP3-205ENST00000557884 PATL2C9JE40 543 aaKnown RBP17.17■□□□□ 0.34
USP3-205ENST00000557884 HIP1O00291 1037 aa17.17■□□□□ 0.34
USP3-205ENST00000557884 NOGQ13253 232 aa17.17■□□□□ 0.34
USP3-205ENST00000557884 VPS53Q5VIR6 699 aa17.17■□□□□ 0.34
USP3-205ENST00000557884 SPRYD7Q5W111 196 aa17.17■□□□□ 0.34
USP3-205ENST00000557884 CTR9Q6PD62 1173 aa17.17■□□□□ 0.34
USP3-205ENST00000557884 METTL16Q86W50 562 aaKnown RBP17.17■□□□□ 0.34
USP3-205ENST00000557884 AMOTL1Q8IY63 956 aa17.17■□□□□ 0.34
USP3-205ENST00000557884 OPTNQ96CV9 577 aa17.17■□□□□ 0.34
USP3-205ENST00000557884 DYNLL2Q96FJ2 89 aa17.17■□□□□ 0.34
USP3-205ENST00000557884 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.17■□□□□ 0.34
USP3-205ENST00000557884 SERPINB13Q9UIV8 391 aa17.17■□□□□ 0.34
USP3-205ENST00000557884 MYH7P12883 1935 aa17.17■□□□□ 0.34
USP3-205ENST00000557884 KIF23Q02241 960 aaPredicted RBP17.16■□□□□ 0.34
USP3-205ENST00000557884 NOL9Q5SY16 702 aaKnown RBP17.16■□□□□ 0.34
USP3-205ENST00000557884 GIMAP6Q6P9H5 292 aa17.16■□□□□ 0.34
USP3-205ENST00000557884 IFNL3Q8IZI9 196 aa17.16■□□□□ 0.34
USP3-205ENST00000557884 OTUD5Q96G74 571 aa17.16■□□□□ 0.34
USP3-205ENST00000557884 EHD4Q9H223 541 aa17.16■□□□□ 0.34
USP3-205ENST00000557884 PICK1Q9NRD5 415 aa17.16■□□□□ 0.34
USP3-205ENST00000557884 CCDC171Q6TFL3 1326 aa17.16■□□□□ 0.34
USP3-205ENST00000557884 MINDY4BA8MYZ0 360 aa17.15■□□□□ 0.34
USP3-205ENST00000557884 FOXP2O15409 715 aa17.15■□□□□ 0.34
USP3-205ENST00000557884 CTNND1O60716 968 aaKnown RBP17.15■□□□□ 0.34
USP3-205ENST00000557884 GDF11O95390 407 aa17.15■□□□□ 0.34
USP3-205ENST00000557884 SHROOM1Q2M3G4 852 aaPredicted RBP17.15■□□□□ 0.34
USP3-205ENST00000557884 C12orf60Q5U649 245 aa17.15■□□□□ 0.34
USP3-205ENST00000557884 CCDC84Q86UT8 332 aaPredicted RBP17.15■□□□□ 0.34
USP3-205ENST00000557884 SCYL3Q8IZE3 742 aa17.15■□□□□ 0.34
USP3-205ENST00000557884 STK11IPQ8N1F8 1099 aa17.15■□□□□ 0.34
USP3-205ENST00000557884 SLC44A5Q8NCS7 719 aa17.15■□□□□ 0.34
USP3-205ENST00000557884 NACAP1Q9BZK3 213 aa17.15■□□□□ 0.34
USP3-205ENST00000557884 ARPP21Q9UBL0 812 aaPredicted RBP17.15■□□□□ 0.34
USP3-205ENST00000557884 AK9Q5TCS8 1911 aa17.14■□□□□ 0.33
USP3-205ENST00000557884 SPDYE5A6NIY4 337 aa17.14■□□□□ 0.33
USP3-205ENST00000557884 CHMLP26374 656 aa17.14■□□□□ 0.33
USP3-205ENST00000557884 SHMT1P34896 483 aa17.14■□□□□ 0.33
USP3-205ENST00000557884 MAP2K2P36507 400 aa17.14■□□□□ 0.33
USP3-205ENST00000557884 ERO1BQ86YB8 467 aa17.14■□□□□ 0.33
USP3-205ENST00000557884 JMYQ8N9B5 988 aa17.14■□□□□ 0.33
USP3-205ENST00000557884 NAPBQ9H115 298 aa17.14■□□□□ 0.33
USP3-205ENST00000557884 NAV1Q8NEY1 1877 aa17.14■□□□□ 0.33
USP3-205ENST00000557884 CDK5RAP2Q96SN8 1893 aa17.14■□□□□ 0.33
USP3-205ENST00000557884 DDX60LQ5H9U9 1706 aaKnown RBP17.13■□□□□ 0.33
USP3-205ENST00000557884 FOCADQ5VW36 1801 aa17.13■□□□□ 0.33
USP3-205ENST00000557884 CAP2P40123 477 aa17.13■□□□□ 0.33
USP3-205ENST00000557884 JAG1P78504 1218 aa17.13■□□□□ 0.33
USP3-205ENST00000557884 GABPAQ06546 454 aa17.13■□□□□ 0.33
USP3-205ENST00000557884 BMP2KLQ5H9B9 411 aa17.13■□□□□ 0.33
USP3-205ENST00000557884 IL25Q9H293 177 aa17.13■□□□□ 0.33
USP3-205ENST00000557884 OTOFQ9HC10 1997 aa17.13■□□□□ 0.33
USP3-205ENST00000557884 SIPA1L1O43166 1804 aa17.12■□□□□ 0.33
USP3-205ENST00000557884 ZBTB48P10074 688 aaPredicted RBP17.12■□□□□ 0.33
USP3-205ENST00000557884 HSPD1P10809 573 aaKnown RBP17.12■□□□□ 0.33
USP3-205ENST00000557884 PTPRAP18433 802 aa17.12■□□□□ 0.33
USP3-205ENST00000557884 MFAP1P55081 439 aaKnown RBP17.12■□□□□ 0.33
USP3-205ENST00000557884 PPIL2Q13356 520 aa17.12■□□□□ 0.33
USP3-205ENST00000557884 CERKLQ49MI3 558 aaPredicted RBP17.12■□□□□ 0.33
USP3-205ENST00000557884 SBK1Q52WX2 424 aa17.12■□□□□ 0.33
USP3-205ENST00000557884 TATDN1Q6P1N9 297 aa17.12■□□□□ 0.33
USP3-205ENST00000557884 ZHX2Q9Y6X8 837 aa17.12■□□□□ 0.33
USP3-205ENST00000557884 IRF6O14896 467 aa17.11■□□□□ 0.33
USP3-205ENST00000557884 GH2P01242 217 aa17.11■□□□□ 0.33
USP3-205ENST00000557884 CDK8P49336 464 aa17.11■□□□□ 0.33
USP3-205ENST00000557884 PPATQ06203 517 aa17.11■□□□□ 0.33
USP3-205ENST00000557884 SWAP70Q9UH65 585 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms