RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 FOXP4Q8IVH2 680 aaPredicted RBP20.57■□□□□ 0.88
PSEN1-217ENST00000556533 APPBP2Q92624 585 aa20.57■□□□□ 0.88
PSEN1-217ENST00000556533 OSBP2Q969R2 916 aa20.57■□□□□ 0.88
PSEN1-217ENST00000556533 RILPL2Q969X0 211 aa20.57■□□□□ 0.88
PSEN1-217ENST00000556533 PICK1Q9NRD5 415 aa20.57■□□□□ 0.88
PSEN1-217ENST00000556533 MCM9Q9NXL9 1143 aa20.57■□□□□ 0.88
PSEN1-217ENST00000556533 DOCK2Q92608 1830 aa20.56■□□□□ 0.88
PSEN1-217ENST00000556533 SPDYE5A6NIY4 337 aa20.56■□□□□ 0.88
PSEN1-217ENST00000556533 CTCFP49711 727 aaPredicted RBP20.56■□□□□ 0.88
PSEN1-217ENST00000556533 TTC6Q86TZ1 520 aa20.56■□□□□ 0.88
PSEN1-217ENST00000556533 RNF186Q9NXI6 227 aa20.56■□□□□ 0.88
PSEN1-217ENST00000556533 HERC5Q9UII4 1024 aaKnown RBP20.56■□□□□ 0.88
PSEN1-217ENST00000556533 CTNND1O60716 968 aaKnown RBP20.55■□□□□ 0.88
PSEN1-217ENST00000556533 PDE4AP27815 886 aa20.55■□□□□ 0.88
PSEN1-217ENST00000556533 TM4SF4P48230 202 aa20.55■□□□□ 0.88
PSEN1-217ENST00000556533 NOL9Q5SY16 702 aaKnown RBP20.55■□□□□ 0.88
PSEN1-217ENST00000556533 SCYL3Q8IZE3 742 aa20.55■□□□□ 0.88
PSEN1-217ENST00000556533 DCP1AQ9NPI6 582 aaPredicted RBP20.55■□□□□ 0.88
PSEN1-217ENST00000556533 COL2A1P02458 1487 aaPredicted RBP20.55■□□□□ 0.88
PSEN1-217ENST00000556533 AK9Q5TCS8 1911 aa20.55■□□□□ 0.88
PSEN1-217ENST00000556533 M0R2C6 588 aa20.54■□□□□ 0.88
PSEN1-217ENST00000556533 CA12O43570 354 aa20.54■□□□□ 0.88
PSEN1-217ENST00000556533 LBX1P52954 281 aa20.54■□□□□ 0.88
PSEN1-217ENST00000556533 DDRGK1Q96HY6 314 aa20.54■□□□□ 0.88
PSEN1-217ENST00000556533 STRBPQ96SI9 672 aaKnown RBP20.54■□□□□ 0.88
PSEN1-217ENST00000556533 SEC62Q99442 399 aaKnown RBP20.54■□□□□ 0.88
PSEN1-217ENST00000556533 ATP8A2Q9NTI2 1148 aa20.54■□□□□ 0.88
PSEN1-217ENST00000556533 PCNTO95613 3336 aa20.53■□□□□ 0.88
PSEN1-217ENST00000556533 IRF6O14896 467 aa20.53■□□□□ 0.88
PSEN1-217ENST00000556533 CYP2D6P10635 497 aa20.53■□□□□ 0.88
PSEN1-217ENST00000556533 PLCD1P51178 756 aa20.53■□□□□ 0.88
PSEN1-217ENST00000556533 GTF2A2P52657 109 aa20.53■□□□□ 0.88
PSEN1-217ENST00000556533 INHBEP58166 350 aa20.53■□□□□ 0.88
PSEN1-217ENST00000556533 PPATQ06203 517 aa20.53■□□□□ 0.88
PSEN1-217ENST00000556533 PPIL2Q13356 520 aa20.53■□□□□ 0.88
PSEN1-217ENST00000556533 OSBPL3Q9H4L5 887 aa20.53■□□□□ 0.88
PSEN1-217ENST00000556533 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.53■□□□□ 0.88
PSEN1-217ENST00000556533 ZHX2Q9Y6X8 837 aa20.53■□□□□ 0.88
PSEN1-217ENST00000556533 CCL15-CCL14A0A0B4J2E2 113 aa20.52■□□□□ 0.88
PSEN1-217ENST00000556533 GPAA1O43292 621 aa20.52■□□□□ 0.88
PSEN1-217ENST00000556533 APPP05067 770 aa20.52■□□□□ 0.88
PSEN1-217ENST00000556533 HSPA8P11142 646 aaKnown RBP20.52■□□□□ 0.88
PSEN1-217ENST00000556533 PTPRAP18433 802 aa20.52■□□□□ 0.88
PSEN1-217ENST00000556533 RRP1BQ14684 758 aaKnown RBP20.52■□□□□ 0.88
PSEN1-217ENST00000556533 CCL15Q16663 113 aa20.52■□□□□ 0.88
PSEN1-217ENST00000556533 ZMYM1Q5SVZ6 1142 aa20.52■□□□□ 0.88
PSEN1-217ENST00000556533 CCDC84Q86UT8 332 aaPredicted RBP20.52■□□□□ 0.88
PSEN1-217ENST00000556533 SERPINB13Q9UIV8 391 aa20.52■□□□□ 0.88
PSEN1-217ENST00000556533 THSD7BQ9C0I4 1608 aa20.52■□□□□ 0.88
PSEN1-217ENST00000556533 CAP2P40123 477 aa20.51■□□□□ 0.87
PSEN1-217ENST00000556533 EVX2Q03828 476 aa20.51■□□□□ 0.87
PSEN1-217ENST00000556533 SNAPC2Q13487 334 aa20.51■□□□□ 0.87
PSEN1-217ENST00000556533 METTL16Q86W50 562 aaKnown RBP20.51■□□□□ 0.87
PSEN1-217ENST00000556533 IFNL1Q8IU54 200 aa20.51■□□□□ 0.87
PSEN1-217ENST00000556533 AMOTL1Q8IY63 956 aa20.51■□□□□ 0.87
PSEN1-217ENST00000556533 CCDC136Q96JN2 1154 aa20.51■□□□□ 0.87
PSEN1-217ENST00000556533 MS4A4AQ96JQ5 239 aa20.51■□□□□ 0.87
PSEN1-217ENST00000556533 DNAJC18Q9H819 358 aa20.51■□□□□ 0.87
PSEN1-217ENST00000556533 CYP2D7A0A087X1C5 515 aa20.5■□□□□ 0.87
PSEN1-217ENST00000556533 USP17L12C9JPN9 530 aa20.5■□□□□ 0.87
PSEN1-217ENST00000556533 USP17L21D6R901 530 aa20.5■□□□□ 0.87
PSEN1-217ENST00000556533 GDF11O95390 407 aa20.5■□□□□ 0.87
PSEN1-217ENST00000556533 TBC1D8O95759 1140 aa20.5■□□□□ 0.87
PSEN1-217ENST00000556533 CETPP11597 493 aa20.5■□□□□ 0.87
PSEN1-217ENST00000556533 OTUD7BQ6GQQ9 843 aa20.5■□□□□ 0.87
PSEN1-217ENST00000556533 BRI3BPQ8WY22 251 aa20.5■□□□□ 0.87
PSEN1-217ENST00000556533 PTPN18Q99952 460 aa20.5■□□□□ 0.87
PSEN1-217ENST00000556533 EHD4Q9H223 541 aa20.5■□□□□ 0.87
PSEN1-217ENST00000556533 GSG1L2A8MUP6 293 aa20.49■□□□□ 0.87
PSEN1-217ENST00000556533 IGF2BP3O00425 579 aaKnown RBP eCLIP20.49■□□□□ 0.87
PSEN1-217ENST00000556533 CCDC129Q6ZRS4 1044 aa20.49■□□□□ 0.87
PSEN1-217ENST00000556533 CENPQQ7L2Z9 268 aaPredicted RBP20.49■□□□□ 0.87
PSEN1-217ENST00000556533 SAGE1Q9NXZ1 904 aa20.49■□□□□ 0.87
PSEN1-217ENST00000556533 TRIM75PA6NK02 468 aa20.48■□□□□ 0.87
PSEN1-217ENST00000556533 GNAT2P19087 354 aa20.48■□□□□ 0.87
PSEN1-217ENST00000556533 JAG1P78504 1218 aa20.48■□□□□ 0.87
PSEN1-217ENST00000556533 SHROOM1Q2M3G4 852 aaPredicted RBP20.48■□□□□ 0.87
PSEN1-217ENST00000556533 CTR9Q6PD62 1173 aa20.48■□□□□ 0.87
PSEN1-217ENST00000556533 DYNLL2Q96FJ2 89 aa20.48■□□□□ 0.87
PSEN1-217ENST00000556533 FAM227BQ96M60 508 aa20.48■□□□□ 0.87
PSEN1-217ENST00000556533 OTOFQ9HC10 1997 aa20.48■□□□□ 0.87
PSEN1-217ENST00000556533 TESPA1A2RU30 521 aaPredicted RBP20.47■□□□□ 0.87
PSEN1-217ENST00000556533 MINDY4BA8MYZ0 360 aa20.47■□□□□ 0.87
PSEN1-217ENST00000556533 PATL2C9JE40 543 aaKnown RBP20.47■□□□□ 0.87
PSEN1-217ENST00000556533 ALDH1A1P00352 501 aa20.47■□□□□ 0.87
PSEN1-217ENST00000556533 TDO2P48775 406 aa20.47■□□□□ 0.87
PSEN1-217ENST00000556533 NMIQ13287 307 aaPredicted RBP20.47■□□□□ 0.87
PSEN1-217ENST00000556533 CERKLQ49MI3 558 aaPredicted RBP20.47■□□□□ 0.87
PSEN1-217ENST00000556533 C12orf60Q5U649 245 aa20.47■□□□□ 0.87
PSEN1-217ENST00000556533 AFG3L2Q9Y4W6 797 aa20.47■□□□□ 0.87
PSEN1-217ENST00000556533 USP17L5A8MUK1 530 aa20.46■□□□□ 0.87
PSEN1-217ENST00000556533 SMIM22K7EJ46 135 aa20.46■□□□□ 0.87
PSEN1-217ENST00000556533 GH2P01242 217 aa20.46■□□□□ 0.87
PSEN1-217ENST00000556533 SDSP20132 328 aa20.46■□□□□ 0.87
PSEN1-217ENST00000556533 SHMT1P34896 483 aa20.46■□□□□ 0.87
PSEN1-217ENST00000556533 SPP2Q13103 211 aa20.46■□□□□ 0.87
PSEN1-217ENST00000556533 TTC22Q5TAA0 569 aa20.46■□□□□ 0.87
PSEN1-217ENST00000556533 TATDN1Q6P1N9 297 aa20.46■□□□□ 0.87
PSEN1-217ENST00000556533 STK11IPQ8N1F8 1099 aa20.46■□□□□ 0.87
PSEN1-217ENST00000556533 SLC44A5Q8NCS7 719 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms