RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 NTF4P34130 210 aa6.19□□□□□ -1.42
PCNX4-206ENST00000553513 TAGLNQ01995 201 aaKnown RBP6.19□□□□□ -1.42
PCNX4-206ENST00000553513 PTPN11Q06124 597 aaPredicted RBP6.19□□□□□ -1.42
PCNX4-206ENST00000553513 INPP5AQ14642 412 aa6.19□□□□□ -1.42
PCNX4-206ENST00000553513 CYFIP1Q7L576 1253 aa6.19□□□□□ -1.42
PCNX4-206ENST00000553513 VSIG10LQ86VR7 867 aa6.19□□□□□ -1.42
PCNX4-206ENST00000553513 ZNF507Q8TCN5 953 aa6.19□□□□□ -1.42
PCNX4-206ENST00000553513 PLPPR2Q96GM1 343 aa6.19□□□□□ -1.42
PCNX4-206ENST00000553513 PSMG3-AS1Q96PY0 264 aa6.19□□□□□ -1.42
PCNX4-206ENST00000553513 DUSP23Q9BVJ7 150 aa6.19□□□□□ -1.42
PCNX4-206ENST00000553513 MIR1-1HGQ9H1L0 117 aa6.19□□□□□ -1.42
PCNX4-206ENST00000553513 ZC3H7BQ9UGR2 993 aaKnown RBP6.19□□□□□ -1.42
PCNX4-206ENST00000553513 ADAMTS4O75173 837 aa6.18□□□□□ -1.42
PCNX4-206ENST00000553513 SEPT6Q14141 434 aa6.18□□□□□ -1.42
PCNX4-206ENST00000553513 WIPI1Q5MNZ9 446 aaPredicted RBP6.18□□□□□ -1.42
PCNX4-206ENST00000553513 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.18□□□□□ -1.42
PCNX4-206ENST00000553513 ARHGAP27Q6ZUM4 889 aa6.18□□□□□ -1.42
PCNX4-206ENST00000553513 TOP6BLQ8N6T0 577 aa6.18□□□□□ -1.42
PCNX4-206ENST00000553513 CCDC39Q9UFE4 941 aa6.18□□□□□ -1.42
PCNX4-206ENST00000553513 PCDHB5Q9Y5E4 795 aa6.18□□□□□ -1.42
PCNX4-206ENST00000553513 LEFTY1O75610 366 aa6.17□□□□□ -1.42
PCNX4-206ENST00000553513 GIPC2Q8TF65 315 aa6.17□□□□□ -1.42
PCNX4-206ENST00000553513 MRRFQ96E11 262 aaKnown RBP6.17□□□□□ -1.42
PCNX4-206ENST00000553513 FBXL18Q96ME1 805 aa6.17□□□□□ -1.42
PCNX4-206ENST00000553513 WNT10AQ9GZT5 417 aa6.17□□□□□ -1.42
PCNX4-206ENST00000553513 PRDM10Q9NQV6 1147 aa6.17□□□□□ -1.42
PCNX4-206ENST00000553513 TFE3P19532 575 aaPredicted RBP6.16□□□□□ -1.42
PCNX4-206ENST00000553513 ETF1P62495 437 aaKnown RBP6.16□□□□□ -1.42
PCNX4-206ENST00000553513 TSNAXIP1Q2TAA8 658 aa6.16□□□□□ -1.42
PCNX4-206ENST00000553513 UBE3DQ7Z6J8 389 aa6.16□□□□□ -1.42
PCNX4-206ENST00000553513 MISP3Q96FF7 219 aa6.16□□□□□ -1.42
PCNX4-206ENST00000553513 MKNK2Q9HBH9 465 aa6.16□□□□□ -1.42
PCNX4-206ENST00000553513 GTF2IRD1Q9UHL9 959 aa6.16□□□□□ -1.42
PCNX4-206ENST00000553513 TACC3Q9Y6A5 838 aa6.16□□□□□ -1.42
PCNX4-206ENST00000553513 OAS3Q9Y6K5 1087 aaKnown RBP6.16□□□□□ -1.42
PCNX4-206ENST00000553513 LRIG2O94898 1065 aa6.15□□□□□ -1.42
PCNX4-206ENST00000553513 PWP1Q13610 501 aa6.15□□□□□ -1.42
PCNX4-206ENST00000553513 ARMCX6Q7L4S7 300 aa6.15□□□□□ -1.42
PCNX4-206ENST00000553513 CCDC84Q86UT8 332 aaPredicted RBP6.15□□□□□ -1.42
PCNX4-206ENST00000553513 STK11IPQ8N1F8 1099 aa6.15□□□□□ -1.42
PCNX4-206ENST00000553513 FAM181AQ8N9Y4 354 aa6.15□□□□□ -1.42
PCNX4-206ENST00000553513 PHC3Q8NDX5 983 aa6.15□□□□□ -1.42
PCNX4-206ENST00000553513 FLCNQ8NFG4 579 aa6.15□□□□□ -1.42
PCNX4-206ENST00000553513 NETO1Q8TDF5 533 aa6.15□□□□□ -1.42
PCNX4-206ENST00000553513 TLR6Q9Y2C9 796 aa6.15□□□□□ -1.42
PCNX4-206ENST00000553513 GFRA2O00451 464 aa6.14□□□□□ -1.43
PCNX4-206ENST00000553513 GRK4P32298 578 aa6.14□□□□□ -1.43
PCNX4-206ENST00000553513 CAP2P40123 477 aa6.14□□□□□ -1.43
PCNX4-206ENST00000553513 CDK8P49336 464 aa6.14□□□□□ -1.43
PCNX4-206ENST00000553513 IRAK1P51617 712 aa6.14□□□□□ -1.43
PCNX4-206ENST00000553513 RPL6Q02878 288 aaKnown RBP6.14□□□□□ -1.43
PCNX4-206ENST00000553513 RELL1Q8IUW5 271 aa6.14□□□□□ -1.43
PCNX4-206ENST00000553513 HID1Q8IV36 788 aa6.14□□□□□ -1.43
PCNX4-206ENST00000553513 TP53INP2Q8IXH6 220 aa6.14□□□□□ -1.43
PCNX4-206ENST00000553513 PLD6Q8N2A8 252 aaKnown RBP6.14□□□□□ -1.43
PCNX4-206ENST00000553513 FOXQ1Q9C009 403 aa6.14□□□□□ -1.43
PCNX4-206ENST00000553513 FBRSQ9HAH7 460 aa6.14□□□□□ -1.43
PCNX4-206ENST00000553513 SLC5A6Q9Y289 635 aa6.14□□□□□ -1.43
PCNX4-206ENST00000553513 IGF2BP3O00425 579 aaKnown RBP eCLIP6.13□□□□□ -1.43
PCNX4-206ENST00000553513 CEACAM5P06731 702 aa6.13□□□□□ -1.43
PCNX4-206ENST00000553513 ZNF16P17020 682 aaPredicted RBP6.13□□□□□ -1.43
PCNX4-206ENST00000553513 OXCT1P55809 520 aa6.13□□□□□ -1.43
PCNX4-206ENST00000553513 LMNB2Q03252 620 aa6.13□□□□□ -1.43
PCNX4-206ENST00000553513 PDE4BQ07343 736 aa6.13□□□□□ -1.43
PCNX4-206ENST00000553513 SLBPQ14493 270 aaKnown RBP eCLIP6.13□□□□□ -1.43
PCNX4-206ENST00000553513 IFI16Q16666 785 aaKnown RBP6.13□□□□□ -1.43
PCNX4-206ENST00000553513 MFSD2AQ8NA29 543 aa6.13□□□□□ -1.43
PCNX4-206ENST00000553513 AGBL5Q8NDL9 886 aa6.13□□□□□ -1.43
PCNX4-206ENST00000553513 JARID2Q92833 1246 aaPredicted RBP6.13□□□□□ -1.43
PCNX4-206ENST00000553513 TMEM74Q96NL1 305 aa6.13□□□□□ -1.43
PCNX4-206ENST00000553513 RSRP1Q9BUV0 290 aa6.13□□□□□ -1.43
PCNX4-206ENST00000553513 BPNT1O95861 308 aa6.12□□□□□ -1.43
PCNX4-206ENST00000553513 GBP2P32456 591 aaPredicted RBP6.12□□□□□ -1.43
PCNX4-206ENST00000553513 CAMK2GQ13555 558 aaPredicted RBP6.12□□□□□ -1.43
PCNX4-206ENST00000553513 NKG7Q16617 165 aa6.12□□□□□ -1.43
PCNX4-206ENST00000553513 BCL7CQ8WUZ0 217 aaPredicted RBP6.12□□□□□ -1.43
PCNX4-206ENST00000553513 HEXIM2Q96MH2 286 aaKnown RBP6.12□□□□□ -1.43
PCNX4-206ENST00000553513 PRDM5Q9NQX1 630 aaPredicted RBP6.12□□□□□ -1.43
PCNX4-206ENST00000553513 VAV3Q9UKW4 847 aa6.12□□□□□ -1.43
PCNX4-206ENST00000553513 TMEM265A0A087WTH1 108 aa6.11□□□□□ -1.43
PCNX4-206ENST00000553513 UNCXA6NJT0 531 aa6.11□□□□□ -1.43
PCNX4-206ENST00000553513 GNAT3A8MTJ3 354 aa6.11□□□□□ -1.43
PCNX4-206ENST00000553513 F6X3S4 739 aa6.11□□□□□ -1.43
PCNX4-206ENST00000553513 EOMESO95936 686 aa6.11□□□□□ -1.43
PCNX4-206ENST00000553513 PGRP06401 933 aa6.11□□□□□ -1.43
PCNX4-206ENST00000553513 ITIH2P19823 946 aa6.11□□□□□ -1.43
PCNX4-206ENST00000553513 PRKCQQ04759 706 aa6.11□□□□□ -1.43
PCNX4-206ENST00000553513 MRPL58Q14197 206 aaKnown RBP6.11□□□□□ -1.43
PCNX4-206ENST00000553513 MCTP1Q6DN14 999 aa6.11□□□□□ -1.43
PCNX4-206ENST00000553513 ZNF746Q6NUN9 644 aaPredicted RBP6.11□□□□□ -1.43
PCNX4-206ENST00000553513 NFXL1Q6ZNB6 911 aa6.11□□□□□ -1.43
PCNX4-206ENST00000553513 FAM214BQ7L5A3 538 aa6.11□□□□□ -1.43
PCNX4-206ENST00000553513 ABI1Q8IZP0 508 aa6.11□□□□□ -1.43
PCNX4-206ENST00000553513 HRASLS5Q96KN8 279 aa6.11□□□□□ -1.43
PCNX4-206ENST00000553513 RHOVQ96L33 236 aa6.11□□□□□ -1.43
PCNX4-206ENST00000553513 MIPEPQ99797 713 aa6.11□□□□□ -1.43
PCNX4-206ENST00000553513 PAK6Q9NQU5 681 aaPredicted RBP6.11□□□□□ -1.43
PCNX4-206ENST00000553513 USP35Q9P2H5 1018 aa6.11□□□□□ -1.43
PCNX4-206ENST00000553513 MAPK8IP1Q9UQF2 711 aa6.11□□□□□ -1.43
PCNX4-206ENST00000553513 U3KQE9 123 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms