RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 ZSCAN22P10073 491 aaPredicted RBP19.78■□□□□ 0.76
COPS3-212ENST00000539941 TGFBRAP1Q8WUH2 860 aa19.78■□□□□ 0.76
COPS3-212ENST00000539941 NAP1L2Q9ULW6 460 aaPredicted RBP19.78■□□□□ 0.76
COPS3-212ENST00000539941 FOCADQ5VW36 1801 aa19.78■□□□□ 0.76
COPS3-212ENST00000539941 DDX60LQ5H9U9 1706 aaKnown RBP19.78■□□□□ 0.76
COPS3-212ENST00000539941 PSME4Q14997 1843 aa19.78■□□□□ 0.76
COPS3-212ENST00000539941 RCAN1P53805 252 aa19.78■□□□□ 0.76
COPS3-212ENST00000539941 LARP1BQ659C4 914 aaKnown RBP19.78■□□□□ 0.76
COPS3-212ENST00000539941 NSUN7Q8NE18 718 aaKnown RBP19.78■□□□□ 0.76
COPS3-212ENST00000539941 TEKT1Q969V4 418 aa19.78■□□□□ 0.76
COPS3-212ENST00000539941 HPS5Q9UPZ3 1129 aa19.78■□□□□ 0.76
COPS3-212ENST00000539941 BRCA1P38398 1863 aaKnown RBP19.77■□□□□ 0.76
COPS3-212ENST00000539941 CCT2P78371 535 aaKnown RBP19.77■□□□□ 0.76
COPS3-212ENST00000539941 APOA5Q6Q788 366 aa19.77■□□□□ 0.76
COPS3-212ENST00000539941 UBAC1Q9BSL1 405 aa19.77■□□□□ 0.76
COPS3-212ENST00000539941 ATP6V1DQ9Y5K8 247 aa19.77■□□□□ 0.76
COPS3-212ENST00000539941 NID2Q14112 1375 aa19.76■□□□□ 0.75
COPS3-212ENST00000539941 CCDC69A6NI79 296 aa19.76■□□□□ 0.75
COPS3-212ENST00000539941 USP17L8P0C7I0 530 aa19.76■□□□□ 0.75
COPS3-212ENST00000539941 WTAPQ15007 396 aa19.76■□□□□ 0.75
COPS3-212ENST00000539941 DALRD3Q5D0E6 543 aaKnown RBP19.76■□□□□ 0.75
COPS3-212ENST00000539941 NFXL1Q6ZNB6 911 aa19.76■□□□□ 0.75
COPS3-212ENST00000539941 MTMR6Q9Y217 621 aa19.76■□□□□ 0.75
COPS3-212ENST00000539941 PTPDC1A2A3K4 754 aa19.75■□□□□ 0.75
COPS3-212ENST00000539941 F8W031 263 aaPredicted RBP19.75■□□□□ 0.75
COPS3-212ENST00000539941 JAK2O60674 1132 aa19.75■□□□□ 0.75
COPS3-212ENST00000539941 CTDNEP1O95476 244 aa19.75■□□□□ 0.75
COPS3-212ENST00000539941 IQCA1Q86XH1 822 aa19.75■□□□□ 0.75
COPS3-212ENST00000539941 FLT1P17948 1338 aa19.75■□□□□ 0.75
COPS3-212ENST00000539941 ZBTB43O43298 467 aa19.75■□□□□ 0.75
COPS3-212ENST00000539941 CYP2D6P10635 497 aa19.75■□□□□ 0.75
COPS3-212ENST00000539941 SYNE3Q6ZMZ3 975 aa19.75■□□□□ 0.75
COPS3-212ENST00000539941 MAPKAPK5Q8IW41 473 aa19.75■□□□□ 0.75
COPS3-212ENST00000539941 FAM184AQ8NB25 1140 aa19.75■□□□□ 0.75
COPS3-212ENST00000539941 ZDHHC15Q96MV8 337 aa19.75■□□□□ 0.75
COPS3-212ENST00000539941 MXD3Q9BW11 206 aa19.75■□□□□ 0.75
COPS3-212ENST00000539941 ZNF287Q9HBT7 754 aa19.75■□□□□ 0.75
COPS3-212ENST00000539941 NCOA5Q9HCD5 579 aaKnown RBP19.75■□□□□ 0.75
COPS3-212ENST00000539941 KCNQ5Q9NR82 932 aa19.75■□□□□ 0.75
COPS3-212ENST00000539941 SLC12A7Q9Y666 1083 aa19.75■□□□□ 0.75
COPS3-212ENST00000539941 MYO3BQ8WXR4 1341 aa19.74■□□□□ 0.75
COPS3-212ENST00000539941 SMIM22K7EJ46 135 aa19.74■□□□□ 0.75
COPS3-212ENST00000539941 RANBP6O60518 1105 aaKnown RBP19.74■□□□□ 0.75
COPS3-212ENST00000539941 CDKL5O76039 1030 aa19.74■□□□□ 0.75
COPS3-212ENST00000539941 F13A1P00488 732 aa19.74■□□□□ 0.75
COPS3-212ENST00000539941 POLR3DP05423 398 aaPredicted RBP19.74■□□□□ 0.75
COPS3-212ENST00000539941 METAP2P50579 478 aaKnown RBP eCLIP19.74■□□□□ 0.75
COPS3-212ENST00000539941 SEC23AQ15436 765 aa19.74■□□□□ 0.75
COPS3-212ENST00000539941 CPLX2Q6PUV4 134 aaKnown RBP19.74■□□□□ 0.75
COPS3-212ENST00000539941 STK11IPQ8N1F8 1099 aa19.74■□□□□ 0.75
COPS3-212ENST00000539941 ZSCAN10Q96SZ4 725 aaPredicted RBP19.74■□□□□ 0.75
COPS3-212ENST00000539941 RRAGDQ9NQL2 400 aaPredicted RBP19.74■□□□□ 0.75
COPS3-212ENST00000539941 BCS1LQ9Y276 419 aa19.74■□□□□ 0.75
COPS3-212ENST00000539941 MYH1P12882 1939 aa19.73■□□□□ 0.75
COPS3-212ENST00000539941 CPLX1O14810 134 aa19.73■□□□□ 0.75
COPS3-212ENST00000539941 CRKP46108 304 aa19.73■□□□□ 0.75
COPS3-212ENST00000539941 LARGE2Q8N3Y3 721 aa19.73■□□□□ 0.75
COPS3-212ENST00000539941 SERPINA10Q9UK55 444 aa19.73■□□□□ 0.75
COPS3-212ENST00000539941 TNKSO95271 1327 aa19.73■□□□□ 0.75
COPS3-212ENST00000539941 YDJCA8MPS7 323 aa19.72■□□□□ 0.75
COPS3-212ENST00000539941 SCNN1DP51172 638 aa19.72■□□□□ 0.75
COPS3-212ENST00000539941 PPP2R5BQ15173 497 aa19.72■□□□□ 0.75
COPS3-212ENST00000539941 FOXD4L5Q5VV16 416 aaPredicted RBP19.72■□□□□ 0.75
COPS3-212ENST00000539941 APOBEC3HQ6NTF7 200 aaKnown RBP19.72■□□□□ 0.75
COPS3-212ENST00000539941 RGS22Q8NE09 1264 aa19.72■□□□□ 0.75
COPS3-212ENST00000539941 FOXD4L4Q8WXT5 416 aaPredicted RBP19.72■□□□□ 0.75
COPS3-212ENST00000539941 NAP1L5Q96NT1 182 aaPredicted RBP19.72■□□□□ 0.75
COPS3-212ENST00000539941 SENP2Q9HC62 589 aa19.72■□□□□ 0.75
COPS3-212ENST00000539941 FER1L6Q2WGJ9 1857 aa19.72■□□□□ 0.75
COPS3-212ENST00000539941 VPS37CA5D8V6 355 aaPredicted RBP19.71■□□□□ 0.75
COPS3-212ENST00000539941 SKOR2Q2VWA4 1001 aaPredicted RBP19.71■□□□□ 0.75
COPS3-212ENST00000539941 CCDC178Q5BJE1 867 aa19.71■□□□□ 0.75
COPS3-212ENST00000539941 DDX11Q96FC9 970 aa19.71■□□□□ 0.75
COPS3-212ENST00000539941 ECM29Q5VYK3 1845 aa19.71■□□□□ 0.75
COPS3-212ENST00000539941 GOLGA8AA7E2F4 631 aa19.71■□□□□ 0.75
COPS3-212ENST00000539941 PRDM1O75626 825 aa19.71■□□□□ 0.75
COPS3-212ENST00000539941 MCTP1Q6DN14 999 aa19.71■□□□□ 0.75
COPS3-212ENST00000539941 MICU3Q86XE3 530 aa19.71■□□□□ 0.75
COPS3-212ENST00000539941 KIAA0825Q8IV33 1275 aa19.71■□□□□ 0.75
COPS3-212ENST00000539941 ENAHQ8N8S7 591 aaPredicted RBP19.71■□□□□ 0.75
COPS3-212ENST00000539941 ZKSCAN3Q9BRR0 538 aa19.71■□□□□ 0.75
COPS3-212ENST00000539941 USP40Q9NVE5 1235 aa19.71■□□□□ 0.75
COPS3-212ENST00000539941 ISY1Q9ULR0 285 aaKnown RBP19.71■□□□□ 0.75
COPS3-212ENST00000539941 WDHD1O75717 1129 aaPredicted RBP19.7■□□□□ 0.74
COPS3-212ENST00000539941 EVX2Q03828 476 aa19.7■□□□□ 0.74
COPS3-212ENST00000539941 CDC42EP5Q6NZY7 148 aa19.7■□□□□ 0.74
COPS3-212ENST00000539941 C16orf86Q6ZW13 317 aa19.7■□□□□ 0.74
COPS3-212ENST00000539941 ZNF277Q9NRM2 450 aaPredicted RBP19.7■□□□□ 0.74
COPS3-212ENST00000539941 SAP30BPQ9UHR5 308 aaKnown RBP19.7■□□□□ 0.74
COPS3-212ENST00000539941 ADAMTSL1Q8N6G6 1762 aa19.69■□□□□ 0.74
COPS3-212ENST00000539941 CCDC196A0A1B0GTZ2 297 aa19.69■□□□□ 0.74
COPS3-212ENST00000539941 TSPY2A6NKD2 308 aa19.69■□□□□ 0.74
COPS3-212ENST00000539941 NPM3O75607 178 aaKnown RBP19.69■□□□□ 0.74
COPS3-212ENST00000539941 IARSP41252 1262 aaKnown RBP19.69■□□□□ 0.74
COPS3-212ENST00000539941 PLCD1P51178 756 aa19.69■□□□□ 0.74
COPS3-212ENST00000539941 IFIT1BQ5T764 474 aaKnown RBP19.69■□□□□ 0.74
COPS3-212ENST00000539941 TTC6Q86TZ1 520 aa19.69■□□□□ 0.74
COPS3-212ENST00000539941 NIM1KQ8IY84 436 aa19.69■□□□□ 0.74
COPS3-212ENST00000539941 ZNF654Q8IZM8 581 aa19.69■□□□□ 0.74
COPS3-212ENST00000539941 MKNK2Q9HBH9 465 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms