RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 TCP10Q12799 353 aa7.82□□□□□ -1.16
CD44-214ENST00000525211 PICALMQ13492 652 aa7.82□□□□□ -1.16
CD44-214ENST00000525211 RRP1BQ14684 758 aaKnown RBP7.82□□□□□ -1.16
CD44-214ENST00000525211 C8orf34Q49A92 452 aa7.82□□□□□ -1.16
CD44-214ENST00000525211 MOB2Q70IA6 237 aa7.82□□□□□ -1.16
CD44-214ENST00000525211 TEX11Q8IYF3 940 aa7.82□□□□□ -1.16
CD44-214ENST00000525211 TGFBRAP1Q8WUH2 860 aa7.82□□□□□ -1.16
CD44-214ENST00000525211 TEPSINQ96N21 525 aa7.82□□□□□ -1.16
CD44-214ENST00000525211 TMEM39BQ9GZU3 492 aa7.82□□□□□ -1.16
CD44-214ENST00000525211 GPBP1L1Q9HC44 474 aaPredicted RBP7.82□□□□□ -1.16
CD44-214ENST00000525211 INCENPQ9NQS7 918 aa7.82□□□□□ -1.16
CD44-214ENST00000525211 HDAC9Q9UKV0 1011 aa7.82□□□□□ -1.16
CD44-214ENST00000525211 SCN4AP35499 1836 aa7.82□□□□□ -1.16
CD44-214ENST00000525211 RPAP1Q9BWH6 1393 aaPredicted RBP7.82□□□□□ -1.16
CD44-214ENST00000525211 CDK5RAP2Q96SN8 1893 aa7.81□□□□□ -1.16
CD44-214ENST00000525211 SIPA1L1O43166 1804 aa7.81□□□□□ -1.16
CD44-214ENST00000525211 SGSM2O43147 1006 aa7.81□□□□□ -1.16
CD44-214ENST00000525211 ITGBL1O95965 494 aaPredicted RBP7.81□□□□□ -1.16
CD44-214ENST00000525211 PLCD1P51178 756 aa7.81□□□□□ -1.16
CD44-214ENST00000525211 GSTO1P78417 241 aa7.81□□□□□ -1.16
CD44-214ENST00000525211 JAG1P78504 1218 aa7.81□□□□□ -1.16
CD44-214ENST00000525211 RASA3Q14644 834 aa7.81□□□□□ -1.16
CD44-214ENST00000525211 NBPF12Q5TAG4 269 aaPredicted RBP7.81□□□□□ -1.16
CD44-214ENST00000525211 USP50Q70EL3 339 aaPredicted RBP7.81□□□□□ -1.16
CD44-214ENST00000525211 PLPP6Q8IY26 295 aa7.81□□□□□ -1.16
CD44-214ENST00000525211 OGFOD1Q8N543 542 aa7.81□□□□□ -1.16
CD44-214ENST00000525211 SLC39A7Q92504 469 aa7.81□□□□□ -1.16
CD44-214ENST00000525211 ESYT1Q9BSJ8 1104 aa7.81□□□□□ -1.16
CD44-214ENST00000525211 NBPF3Q9H094 633 aa7.81□□□□□ -1.16
CD44-214ENST00000525211 VEZTQ9HBM0 779 aa7.81□□□□□ -1.16
CD44-214ENST00000525211 FLT1P17948 1338 aa7.8□□□□□ -1.16
CD44-214ENST00000525211 AK9Q5TCS8 1911 aa7.8□□□□□ -1.16
CD44-214ENST00000525211 DPYSL4O14531 572 aa7.8□□□□□ -1.16
CD44-214ENST00000525211 LDHCP07864 332 aa7.8□□□□□ -1.16
CD44-214ENST00000525211 MCMDC2Q4G0Z9 681 aa7.8□□□□□ -1.16
CD44-214ENST00000525211 TMEM92Q6UXU6 159 aa7.8□□□□□ -1.16
CD44-214ENST00000525211 STK11IPQ8N1F8 1099 aa7.8□□□□□ -1.16
CD44-214ENST00000525211 SLC44A5Q8NCS7 719 aa7.8□□□□□ -1.16
CD44-214ENST00000525211 DYNLL2Q96FJ2 89 aa7.8□□□□□ -1.16
CD44-214ENST00000525211 IDI2Q9BXS1 227 aa7.8□□□□□ -1.16
CD44-214ENST00000525211 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.8□□□□□ -1.16
CD44-214ENST00000525211 LSG1Q9H089 658 aaKnown RBP7.8□□□□□ -1.16
CD44-214ENST00000525211 DNAJC18Q9H819 358 aa7.8□□□□□ -1.16
CD44-214ENST00000525211 DCP1AQ9NPI6 582 aaPredicted RBP7.8□□□□□ -1.16
CD44-214ENST00000525211 HELLSQ9NRZ9 838 aa7.8□□□□□ -1.16
CD44-214ENST00000525211 DIAPH3Q9NSV4 1193 aa7.8□□□□□ -1.16
CD44-214ENST00000525211 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.8□□□□□ -1.16
CD44-214ENST00000525211 PALD1Q9ULE6 856 aa7.8□□□□□ -1.16
CD44-214ENST00000525211 SLC4A4Q9Y6R1 1079 aa7.8□□□□□ -1.16
CD44-214ENST00000525211 ATRNL1Q5VV63 1379 aa7.8□□□□□ -1.16
CD44-214ENST00000525211 DDX60LQ5H9U9 1706 aaKnown RBP7.8□□□□□ -1.16
CD44-214ENST00000525211 ECM29Q5VYK3 1845 aa7.8□□□□□ -1.16
CD44-214ENST00000525211 CCDC171Q6TFL3 1326 aa7.79□□□□□ -1.16
CD44-214ENST00000525211 IQCA1LA6NCM1 817 aa7.79□□□□□ -1.16
CD44-214ENST00000525211 CDC45O75419 566 aa7.79□□□□□ -1.16
CD44-214ENST00000525211 ZFYP08048 801 aaPredicted RBP7.79□□□□□ -1.16
CD44-214ENST00000525211 C7P10643 843 aa7.79□□□□□ -1.16
CD44-214ENST00000525211 HSPD1P10809 573 aaKnown RBP7.79□□□□□ -1.16
CD44-214ENST00000525211 CST9Q5W186 159 aa7.79□□□□□ -1.16
CD44-214ENST00000525211 CTR9Q6PD62 1173 aa7.79□□□□□ -1.16
CD44-214ENST00000525211 KRT26Q7Z3Y9 468 aa7.79□□□□□ -1.16
CD44-214ENST00000525211 LDHDQ86WU2 507 aa7.79□□□□□ -1.16
CD44-214ENST00000525211 AIDAQ96BJ3 306 aa7.79□□□□□ -1.16
CD44-214ENST00000525211 CDCA5Q96FF9 252 aa7.79□□□□□ -1.16
CD44-214ENST00000525211 OSBPL5Q9H0X9 879 aaPredicted RBP7.79□□□□□ -1.16
CD44-214ENST00000525211 DEFB129Q9H1M3 183 aa7.79□□□□□ -1.16
CD44-214ENST00000525211 BAZ2AQ9UIF9 1905 aaKnown RBP7.79□□□□□ -1.16
CD44-214ENST00000525211 PATL2C9JE40 543 aaKnown RBP7.78□□□□□ -1.16
CD44-214ENST00000525211 USP17L12C9JPN9 530 aa7.78□□□□□ -1.16
CD44-214ENST00000525211 USP17L21D6R901 530 aa7.78□□□□□ -1.16
CD44-214ENST00000525211 FGAP02671 866 aa7.78□□□□□ -1.16
CD44-214ENST00000525211 MLLT3P42568 568 aaPredicted RBP7.78□□□□□ -1.16
CD44-214ENST00000525211 HAND2P61296 217 aa7.78□□□□□ -1.16
CD44-214ENST00000525211 HTRA3P83110 453 aa7.78□□□□□ -1.16
CD44-214ENST00000525211 CTDSPL2Q05D32 466 aa7.78□□□□□ -1.16
CD44-214ENST00000525211 PRKG1Q13976 671 aa7.78□□□□□ -1.16
CD44-214ENST00000525211 SMYD5Q6GMV2 418 aa7.78□□□□□ -1.16
CD44-214ENST00000525211 ZSCAN25Q6NSZ9 544 aa7.78□□□□□ -1.16
CD44-214ENST00000525211 MIGA2Q7L4E1 593 aa7.78□□□□□ -1.16
CD44-214ENST00000525211 CCDC84Q86UT8 332 aaPredicted RBP7.78□□□□□ -1.16
CD44-214ENST00000525211 TBC1D10CQ8IV04 446 aa7.78□□□□□ -1.16
CD44-214ENST00000525211 IFNL3Q8IZI9 196 aa7.78□□□□□ -1.16
CD44-214ENST00000525211 ZC3H15Q8WU90 426 aaKnown RBP7.78□□□□□ -1.16
CD44-214ENST00000525211 FAM151AQ8WW52 585 aa7.78□□□□□ -1.16
CD44-214ENST00000525211 CRNKL1Q9BZJ0 848 aaKnown RBP7.78□□□□□ -1.16
CD44-214ENST00000525211 METRNQ9UJH8 293 aa7.78□□□□□ -1.16
CD44-214ENST00000525211 FOCADQ5VW36 1801 aa7.78□□□□□ -1.16
CD44-214ENST00000525211 PASKQ96RG2 1323 aa7.78□□□□□ -1.16
CD44-214ENST00000525211 PITPNM2Q9BZ72 1349 aa7.78□□□□□ -1.16
CD44-214ENST00000525211 ENTPD3O75355 529 aa7.77□□□□□ -1.17
CD44-214ENST00000525211 BAG3O95817 575 aa7.77□□□□□ -1.17
CD44-214ENST00000525211 USP5P45974 858 aa7.77□□□□□ -1.17
CD44-214ENST00000525211 C1QTNF8P60827 252 aa7.77□□□□□ -1.17
CD44-214ENST00000525211 GABPAQ06546 454 aa7.77□□□□□ -1.17
CD44-214ENST00000525211 STOX1Q6ZVD7 989 aa7.77□□□□□ -1.17
CD44-214ENST00000525211 PNMA8AQ86V59 439 aaPredicted RBP7.77□□□□□ -1.17
CD44-214ENST00000525211 SLF2Q8IX21 1173 aa7.77□□□□□ -1.17
CD44-214ENST00000525211 DCPSQ96C86 337 aaKnown RBP7.77□□□□□ -1.17
CD44-214ENST00000525211 ZNF408Q9H9D4 720 aa7.77□□□□□ -1.17
CD44-214ENST00000525211 MCM9Q9NXL9 1143 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms