RNA–Protein interactions for RNA: ENST00000509317.5

COPS4-207, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-207ENST00000509317 C11orf49Q9H6J7 331 aa12.7□□□□□ -0.38
COPS4-207ENST00000509317 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.7□□□□□ -0.38
COPS4-207ENST00000509317 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.7□□□□□ -0.38
COPS4-207ENST00000509317 DOCK3Q8IZD9 2030 aa12.7□□□□□ -0.38
COPS4-207ENST00000509317 MYH13Q9UKX3 1938 aa12.7□□□□□ -0.38
COPS4-207ENST00000509317 DNAH12Q6ZR08 3092 aa12.7□□□□□ -0.38
COPS4-207ENST00000509317 PHIPQ8WWQ0 1821 aa12.69□□□□□ -0.38
COPS4-207ENST00000509317 MROH7-TTC4A0A0A0MT08 1334 aa12.69□□□□□ -0.38
COPS4-207ENST00000509317 RPTORQ8N122 1335 aa12.69□□□□□ -0.38
COPS4-207ENST00000509317 PTPRFP10586 1907 aa12.69□□□□□ -0.38
COPS4-207ENST00000509317 JAG1P78504 1218 aa12.69□□□□□ -0.38
COPS4-207ENST00000509317 MDM2Q00987 491 aaPredicted RBP12.69□□□□□ -0.38
COPS4-207ENST00000509317 MECOMQ03112 1051 aa12.69□□□□□ -0.38
COPS4-207ENST00000509317 TDHQ8IZJ6 230 aa12.69□□□□□ -0.38
COPS4-207ENST00000509317 FAM161BQ96MY7 647 aa12.69□□□□□ -0.38
COPS4-207ENST00000509317 COL25A1Q9BXS0 654 aaPredicted RBP12.69□□□□□ -0.38
COPS4-207ENST00000509317 UBE2OQ9C0C9 1292 aaKnown RBP12.69□□□□□ -0.38
COPS4-207ENST00000509317 HMX1Q9NP08 348 aaPredicted RBP12.69□□□□□ -0.38
COPS4-207ENST00000509317 STXBP5LQ9Y2K9 1186 aa12.69□□□□□ -0.38
COPS4-207ENST00000509317 DOCK1Q14185 1865 aa12.69□□□□□ -0.38
COPS4-207ENST00000509317 PTPRCP08575 1304 aa12.68□□□□□ -0.38
COPS4-207ENST00000509317 SPTBN5Q9NRC6 3674 aaKnown RBP12.68□□□□□ -0.38
COPS4-207ENST00000509317 CIAO1O76071 339 aa12.68□□□□□ -0.38
COPS4-207ENST00000509317 PRKAR2AP13861 404 aaKnown RBP12.68□□□□□ -0.38
COPS4-207ENST00000509317 HOXD11P31277 338 aaPredicted RBP12.68□□□□□ -0.38
COPS4-207ENST00000509317 LRIT3Q3SXY7 679 aa12.68□□□□□ -0.38
COPS4-207ENST00000509317 TBC1D9Q6ZT07 1266 aa12.68□□□□□ -0.38
COPS4-207ENST00000509317 ZNF280CQ8ND82 737 aa12.68□□□□□ -0.38
COPS4-207ENST00000509317 TXNRD2Q9NNW7 524 aa12.68□□□□□ -0.38
COPS4-207ENST00000509317 PNMA3Q9UL41 463 aa12.68□□□□□ -0.38
COPS4-207ENST00000509317 OGDHLQ9ULD0 1010 aa12.68□□□□□ -0.38
COPS4-207ENST00000509317 DDX60LQ5H9U9 1706 aaKnown RBP12.68□□□□□ -0.38
COPS4-207ENST00000509317 ZNF521Q96K83 1311 aa12.67□□□□□ -0.38
COPS4-207ENST00000509317 SEMA3EO15041 775 aa12.67□□□□□ -0.38
COPS4-207ENST00000509317 UBTFL1P0CB47 393 aaPredicted RBP12.67□□□□□ -0.38
COPS4-207ENST00000509317 CCND3P30281 292 aaPredicted RBP12.67□□□□□ -0.38
COPS4-207ENST00000509317 CCL14Q16627 93 aa12.67□□□□□ -0.38
COPS4-207ENST00000509317 LRRC26Q2I0M4 334 aa12.67□□□□□ -0.38
COPS4-207ENST00000509317 ANKLE1Q8NAG6 615 aa12.67□□□□□ -0.38
COPS4-207ENST00000509317 PROCA1Q8NCQ7 364 aaPredicted RBP12.67□□□□□ -0.38
COPS4-207ENST00000509317 P2RX7Q99572 595 aaKnown RBP12.67□□□□□ -0.38
COPS4-207ENST00000509317 MYH2Q9UKX2 1941 aa12.66□□□□□ -0.38
COPS4-207ENST00000509317 GPR75-ASB3A0A0A6YYF3 556 aa12.66□□□□□ -0.38
COPS4-207ENST00000509317 CAP2P40123 477 aa12.66□□□□□ -0.38
COPS4-207ENST00000509317 IL15P40933 162 aaPredicted RBP12.66□□□□□ -0.38
COPS4-207ENST00000509317 GCLCP48506 637 aaPredicted RBP12.66□□□□□ -0.38
COPS4-207ENST00000509317 MTMR2Q13614 643 aa12.66□□□□□ -0.38
COPS4-207ENST00000509317 POTEEQ6S8J3 1075 aa12.66□□□□□ -0.38
COPS4-207ENST00000509317 FAM163AQ96GL9 167 aaPredicted RBP12.66□□□□□ -0.38
COPS4-207ENST00000509317 XAGE2Q96GT9 111 aa12.66□□□□□ -0.38
COPS4-207ENST00000509317 PRUNE2Q8WUY3 3088 aa12.66□□□□□ -0.38
COPS4-207ENST00000509317 TBC1D12O60347 775 aa12.65□□□□□ -0.38
COPS4-207ENST00000509317 CACNB2Q08289 660 aaPredicted RBP12.65□□□□□ -0.38
COPS4-207ENST00000509317 TFCP2Q12800 502 aa12.65□□□□□ -0.38
COPS4-207ENST00000509317 MAP3K21Q5TCX8 1036 aa12.65□□□□□ -0.38
COPS4-207ENST00000509317 GPR153Q6NV75 609 aa12.65□□□□□ -0.38
COPS4-207ENST00000509317 ERICH6Q7L0X2 663 aa12.65□□□□□ -0.38
COPS4-207ENST00000509317 ZGPATQ8N5A5 531 aaKnown RBP12.65□□□□□ -0.38
COPS4-207ENST00000509317 GUCD1Q96NT3 240 aa12.65□□□□□ -0.38
COPS4-207ENST00000509317 PORCNQ9H237 461 aa12.65□□□□□ -0.38
COPS4-207ENST00000509317 NDUFB9Q9Y6M9 179 aa12.65□□□□□ -0.38
COPS4-207ENST00000509317 PLXNB2O15031 1838 aa12.65□□□□□ -0.39
COPS4-207ENST00000509317 CDH23Q9H251 3354 aa12.64□□□□□ -0.39
COPS4-207ENST00000509317 A0A1B0GUL7 405 aa12.64□□□□□ -0.39
COPS4-207ENST00000509317 USP17L5A8MUK1 530 aa12.64□□□□□ -0.39
COPS4-207ENST00000509317 COL6A1P12109 1028 aa12.64□□□□□ -0.39
COPS4-207ENST00000509317 IRX3P78415 501 aaPredicted RBP12.64□□□□□ -0.39
COPS4-207ENST00000509317 Q3C1V9 767 aa12.64□□□□□ -0.39
COPS4-207ENST00000509317 LHX8Q68G74 356 aa12.64□□□□□ -0.39
COPS4-207ENST00000509317 SH3RF3Q8TEJ3 882 aaPredicted RBP12.64□□□□□ -0.39
COPS4-207ENST00000509317 MEIS3Q99687 375 aa12.64□□□□□ -0.39
COPS4-207ENST00000509317 OSBPL5Q9H0X9 879 aaPredicted RBP12.64□□□□□ -0.39
COPS4-207ENST00000509317 HMG20BQ9P0W2 317 aa12.64□□□□□ -0.39
COPS4-207ENST00000509317 MORF4L1Q9UBU8 362 aa12.64□□□□□ -0.39
COPS4-207ENST00000509317 LOC285556D6RIA3 1793 aa12.64□□□□□ -0.39
COPS4-207ENST00000509317 GDF11O95390 407 aa12.63□□□□□ -0.39
COPS4-207ENST00000509317 ZKSCAN1P17029 563 aaPredicted RBP12.63□□□□□ -0.39
COPS4-207ENST00000509317 CAPN2P17655 700 aa12.63□□□□□ -0.39
COPS4-207ENST00000509317 SH3D19Q5HYK7 790 aa12.63□□□□□ -0.39
COPS4-207ENST00000509317 SPTY2D1Q68D10 685 aaPredicted RBP12.63□□□□□ -0.39
COPS4-207ENST00000509317 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.63□□□□□ -0.39
COPS4-207ENST00000509317 SLF2Q8IX21 1173 aa12.63□□□□□ -0.39
COPS4-207ENST00000509317 TEX11Q8IYF3 940 aa12.63□□□□□ -0.39
COPS4-207ENST00000509317 NSUN4Q96CB9 384 aaKnown RBP12.63□□□□□ -0.39
COPS4-207ENST00000509317 NEUROD6Q96NK8 337 aa12.63□□□□□ -0.39
COPS4-207ENST00000509317 NUDT12Q9BQG2 462 aa12.63□□□□□ -0.39
COPS4-207ENST00000509317 PAGR1Q9BTK6 254 aa12.63□□□□□ -0.39
COPS4-207ENST00000509317 DNAJC18Q9H819 358 aa12.63□□□□□ -0.39
COPS4-207ENST00000509317 SMC4Q9NTJ3 1288 aa12.63□□□□□ -0.39
COPS4-207ENST00000509317 RAI14Q9P0K7 980 aa12.63□□□□□ -0.39
COPS4-207ENST00000509317 RBPJLQ9UBG7 517 aa12.63□□□□□ -0.39
COPS4-207ENST00000509317 FBXO3Q9UK99 471 aa12.63□□□□□ -0.39
COPS4-207ENST00000509317 ANP32CO43423 234 aa12.62□□□□□ -0.39
COPS4-207ENST00000509317 ATN1P54259 1190 aaPredicted RBP12.62□□□□□ -0.39
COPS4-207ENST00000509317 BACE1P56817 501 aa12.62□□□□□ -0.39
COPS4-207ENST00000509317 HERVK_113P62684 666 aa12.62□□□□□ -0.39
COPS4-207ENST00000509317 PABPC4Q13310 644 aaKnown RBP eCLIP12.62□□□□□ -0.39
COPS4-207ENST00000509317 GPRC5AQ8NFJ5 357 aa12.62□□□□□ -0.39
COPS4-207ENST00000509317 USP6NLQ92738 828 aa12.62□□□□□ -0.39
COPS4-207ENST00000509317 CDCA7LQ96GN5 454 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms