RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 EHD4Q9H223 541 aa19.14■□□□□ 0.65
SSBP1-214ENST00000498107 ARPP21Q9UBL0 812 aaPredicted RBP19.14■□□□□ 0.65
SSBP1-214ENST00000498107 ZNF112Q9UJU3 913 aa19.14■□□□□ 0.65
SSBP1-214ENST00000498107 GSG1L2A8MUP6 293 aa19.13■□□□□ 0.65
SSBP1-214ENST00000498107 CWC27Q6UX04 472 aaKnown RBP19.13■□□□□ 0.65
SSBP1-214ENST00000498107 SLC10A4Q96EP9 437 aa19.13■□□□□ 0.65
SSBP1-214ENST00000498107 SERPINB13Q9UIV8 391 aa19.13■□□□□ 0.65
SSBP1-214ENST00000498107 FZD1Q9UP38 647 aa19.13■□□□□ 0.65
SSBP1-214ENST00000498107 CCDC171Q6TFL3 1326 aa19.12■□□□□ 0.65
SSBP1-214ENST00000498107 RAD50Q92878 1312 aa19.12■□□□□ 0.65
SSBP1-214ENST00000498107 TDO2P48775 406 aa19.12■□□□□ 0.65
SSBP1-214ENST00000498107 METTL16Q86W50 562 aaKnown RBP19.12■□□□□ 0.65
SSBP1-214ENST00000498107 DDX60LQ5H9U9 1706 aaKnown RBP19.11■□□□□ 0.65
SSBP1-214ENST00000498107 CTNND1O60716 968 aaKnown RBP19.11■□□□□ 0.65
SSBP1-214ENST00000498107 CHMLP26374 656 aa19.11■□□□□ 0.65
SSBP1-214ENST00000498107 SBK1Q52WX2 424 aa19.11■□□□□ 0.65
SSBP1-214ENST00000498107 CCDC129Q6ZRS4 1044 aa19.11■□□□□ 0.65
SSBP1-214ENST00000498107 SKAP1Q86WV1 359 aa19.11■□□□□ 0.65
SSBP1-214ENST00000498107 IFNL3Q8IZI9 196 aa19.11■□□□□ 0.65
SSBP1-214ENST00000498107 CAPNS2Q96L46 248 aa19.11■□□□□ 0.65
SSBP1-214ENST00000498107 NAPBQ9H115 298 aa19.11■□□□□ 0.65
SSBP1-214ENST00000498107 BAZ2AQ9UIF9 1905 aaKnown RBP19.1■□□□□ 0.65
SSBP1-214ENST00000498107 USP17L12C9JPN9 530 aa19.1■□□□□ 0.65
SSBP1-214ENST00000498107 USP17L21D6R901 530 aa19.1■□□□□ 0.65
SSBP1-214ENST00000498107 NOL9Q5SY16 702 aaKnown RBP19.1■□□□□ 0.65
SSBP1-214ENST00000498107 C12orf60Q5U649 245 aa19.1■□□□□ 0.65
SSBP1-214ENST00000498107 CYP4F22Q6NT55 531 aa19.1■□□□□ 0.65
SSBP1-214ENST00000498107 CASC1Q6TDU7 716 aa19.1■□□□□ 0.65
SSBP1-214ENST00000498107 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.1■□□□□ 0.65
SSBP1-214ENST00000498107 SWAP70Q9UH65 585 aa19.1■□□□□ 0.65
SSBP1-214ENST00000498107 WDR33Q9C0J8 1336 aaKnown RBP19.09■□□□□ 0.65
SSBP1-214ENST00000498107 PHF20L1A8MW92 1017 aa19.09■□□□□ 0.65
SSBP1-214ENST00000498107 SLC10A3P09131 477 aa19.09■□□□□ 0.65
SSBP1-214ENST00000498107 PLCD1P51178 756 aa19.09■□□□□ 0.65
SSBP1-214ENST00000498107 NOGQ13253 232 aa19.09■□□□□ 0.65
SSBP1-214ENST00000498107 VGLL4Q14135 290 aa19.09■□□□□ 0.65
SSBP1-214ENST00000498107 SLC4A8Q2Y0W8 1093 aa19.09■□□□□ 0.65
SSBP1-214ENST00000498107 CTR9Q6PD62 1173 aa19.09■□□□□ 0.65
SSBP1-214ENST00000498107 PICK1Q9NRD5 415 aa19.09■□□□□ 0.65
SSBP1-214ENST00000498107 GINM1Q9NU53 330 aa19.09■□□□□ 0.65
SSBP1-214ENST00000498107 OTOFQ9HC10 1997 aa19.08■□□□□ 0.65
SSBP1-214ENST00000498107 SLC3A2P08195 630 aaKnown RBP19.08■□□□□ 0.64
SSBP1-214ENST00000498107 ZBTB48P10074 688 aaPredicted RBP19.08■□□□□ 0.64
SSBP1-214ENST00000498107 INPP5BP32019 993 aa19.08■□□□□ 0.64
SSBP1-214ENST00000498107 VEGFBP49765 207 aa19.08■□□□□ 0.64
SSBP1-214ENST00000498107 GRM1Q13255 1194 aa19.08■□□□□ 0.64
SSBP1-214ENST00000498107 ALX1Q15699 326 aa19.08■□□□□ 0.64
SSBP1-214ENST00000498107 ZNF589Q86UQ0 364 aaPredicted RBP19.08■□□□□ 0.64
SSBP1-214ENST00000498107 ERO1BQ86YB8 467 aa19.08■□□□□ 0.64
SSBP1-214ENST00000498107 RASAL3Q86YV0 1011 aa19.08■□□□□ 0.64
SSBP1-214ENST00000498107 SCYL3Q8IZE3 742 aa19.08■□□□□ 0.64
SSBP1-214ENST00000498107 DNAJC5GQ8N7S2 189 aa19.08■□□□□ 0.64
SSBP1-214ENST00000498107 ZKSCAN4Q969J2 545 aaPredicted RBP19.08■□□□□ 0.64
SSBP1-214ENST00000498107 CLMNQ96JQ2 1002 aa19.08■□□□□ 0.64
SSBP1-214ENST00000498107 ELP3Q9H9T3 547 aa19.08■□□□□ 0.64
SSBP1-214ENST00000498107 ZNF287Q9HBT7 754 aa19.08■□□□□ 0.64
SSBP1-214ENST00000498107 EPB41L4AQ9HCS5 686 aaPredicted RBP19.08■□□□□ 0.64
SSBP1-214ENST00000498107 SIPA1L1O43166 1804 aa19.08■□□□□ 0.64
SSBP1-214ENST00000498107 ZMYM6O95789 1325 aa19.07■□□□□ 0.64
SSBP1-214ENST00000498107 FAM196BA6NMK8 535 aa19.07■□□□□ 0.64
SSBP1-214ENST00000498107 MINDY4BA8MYZ0 360 aa19.07■□□□□ 0.64
SSBP1-214ENST00000498107 HSPD1P10809 573 aaKnown RBP19.07■□□□□ 0.64
SSBP1-214ENST00000498107 MAP2K2P36507 400 aa19.07■□□□□ 0.64
SSBP1-214ENST00000498107 CAP2P40123 477 aa19.07■□□□□ 0.64
SSBP1-214ENST00000498107 GABPAQ06546 454 aa19.07■□□□□ 0.64
SSBP1-214ENST00000498107 REM2Q8IYK8 340 aaPredicted RBP19.07■□□□□ 0.64
SSBP1-214ENST00000498107 SNCAIPQ9Y6H5 919 aa19.07■□□□□ 0.64
SSBP1-214ENST00000498107 SPDYE5A6NIY4 337 aa19.06■□□□□ 0.64
SSBP1-214ENST00000498107 FAM155AB1AL88 458 aaPredicted RBP19.06■□□□□ 0.64
SSBP1-214ENST00000498107 CDC45O75419 566 aa19.06■□□□□ 0.64
SSBP1-214ENST00000498107 CYP2D6P10635 497 aa19.06■□□□□ 0.64
SSBP1-214ENST00000498107 PPATQ06203 517 aa19.06■□□□□ 0.64
SSBP1-214ENST00000498107 VPS53Q5VIR6 699 aa19.06■□□□□ 0.64
SSBP1-214ENST00000498107 SPRYD7Q5W111 196 aa19.06■□□□□ 0.64
SSBP1-214ENST00000498107 TATDN1Q6P1N9 297 aa19.06■□□□□ 0.64
SSBP1-214ENST00000498107 WNK4Q96J92 1243 aa19.06■□□□□ 0.64
SSBP1-214ENST00000498107 TBC1D2Q9BYX2 928 aa19.06■□□□□ 0.64
SSBP1-214ENST00000498107 DNAJC18Q9H819 358 aa19.06■□□□□ 0.64
SSBP1-214ENST00000498107 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.06■□□□□ 0.64
SSBP1-214ENST00000498107 ASNSP08243 561 aa19.05■□□□□ 0.64
SSBP1-214ENST00000498107 CERKLQ49MI3 558 aaPredicted RBP19.05■□□□□ 0.64
SSBP1-214ENST00000498107 C16orf86Q6ZW13 317 aa19.05■□□□□ 0.64
SSBP1-214ENST00000498107 OPTNQ96CV9 577 aa19.05■□□□□ 0.64
SSBP1-214ENST00000498107 DSCC1Q9BVC3 393 aa19.05■□□□□ 0.64
SSBP1-214ENST00000498107 DOCK1Q14185 1865 aa19.05■□□□□ 0.64
SSBP1-214ENST00000498107 LAMB1P07942 1786 aa19.04■□□□□ 0.64
SSBP1-214ENST00000498107 CYP2D7A0A087X1C5 515 aa19.04■□□□□ 0.64
SSBP1-214ENST00000498107 SGSM2O43147 1006 aa19.04■□□□□ 0.64
SSBP1-214ENST00000498107 SLURP2P0DP57 97 aa19.04■□□□□ 0.64
SSBP1-214ENST00000498107 PDE4BQ07343 736 aa19.04■□□□□ 0.64
SSBP1-214ENST00000498107 PPIL2Q13356 520 aa19.04■□□□□ 0.64
SSBP1-214ENST00000498107 CCDC17Q96LX7 622 aa19.04■□□□□ 0.64
SSBP1-214ENST00000498107 CABP5Q9NP86 173 aa19.04■□□□□ 0.64
SSBP1-214ENST00000498107 CTNNA3Q9UI47 895 aa19.04■□□□□ 0.64
SSBP1-214ENST00000498107 ROBO3Q96MS0 1386 aa19.04■□□□□ 0.64
SSBP1-214ENST00000498107 FOXP2O15409 715 aa19.03■□□□□ 0.64
SSBP1-214ENST00000498107 FGAP02671 866 aa19.03■□□□□ 0.64
SSBP1-214ENST00000498107 SHMT1P34896 483 aa19.03■□□□□ 0.64
SSBP1-214ENST00000498107 CDK8P49336 464 aa19.03■□□□□ 0.64
SSBP1-214ENST00000498107 INHBEP58166 350 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms