RNA–Protein interactions for RNA: ENST00000486446.2

PUDP-204, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2

Gene PUDP, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-204ENST00000486446 ZBBXA8MT70 800 aa8.89□□□□□ -0.99
PUDP-204ENST00000486446 UFL1O94874 794 aa8.89□□□□□ -0.99
PUDP-204ENST00000486446 SCNN1DP51172 638 aa8.89□□□□□ -0.99
PUDP-204ENST00000486446 TNIP1Q15025 636 aa8.89□□□□□ -0.99
PUDP-204ENST00000486446 SLC4A10Q6U841 1118 aa8.89□□□□□ -0.99
PUDP-204ENST00000486446 FTSJ3Q8IY81 847 aaKnown RBP8.89□□□□□ -0.99
PUDP-204ENST00000486446 TBC1D16Q8TBP0 767 aa8.89□□□□□ -0.99
PUDP-204ENST00000486446 SLC10A4Q96EP9 437 aa8.89□□□□□ -0.99
PUDP-204ENST00000486446 GPR101Q96P66 508 aaPredicted RBP8.89□□□□□ -0.99
PUDP-204ENST00000486446 BCL2L13Q9BXK5 485 aa8.89□□□□□ -0.99
PUDP-204ENST00000486446 ZC3H12CQ9C0D7 883 aaKnown RBP8.89□□□□□ -0.99
PUDP-204ENST00000486446 GREM2Q9H772 168 aa8.89□□□□□ -0.99
PUDP-204ENST00000486446 DBNDD1Q9H9R9 158 aa8.89□□□□□ -0.99
PUDP-204ENST00000486446 POLLQ9UGP5 575 aa8.89□□□□□ -0.99
PUDP-204ENST00000486446 NOB1Q9ULX3 412 aaKnown RBP8.89□□□□□ -0.99
PUDP-204ENST00000486446 LTBP1Q14766 1721 aa8.88□□□□□ -0.99
PUDP-204ENST00000486446 CNTNAP1P78357 1384 aa8.88□□□□□ -0.99
PUDP-204ENST00000486446 FBXO45P0C2W1 286 aa8.88□□□□□ -0.99
PUDP-204ENST00000486446 FSHRP23945 695 aa8.88□□□□□ -0.99
PUDP-204ENST00000486446 IGHMBP2P38935 993 aaKnown RBP8.88□□□□□ -0.99
PUDP-204ENST00000486446 EPS15P42566 896 aa8.88□□□□□ -0.99
PUDP-204ENST00000486446 GMPSP49915 693 aaPredicted RBP8.88□□□□□ -0.99
PUDP-204ENST00000486446 WDR4P57081 412 aaKnown RBP8.88□□□□□ -0.99
PUDP-204ENST00000486446 BEND3Q5T5X7 828 aa8.88□□□□□ -0.99
PUDP-204ENST00000486446 MAP1SQ66K74 1059 aaPredicted RBP8.88□□□□□ -0.99
PUDP-204ENST00000486446 KCTD15Q96SI1 283 aaPredicted RBP8.88□□□□□ -0.99
PUDP-204ENST00000486446 GMPR2Q9P2T1 348 aaKnown RBP8.88□□□□□ -0.99
PUDP-204ENST00000486446 GGA1Q9UJY5 639 aa8.88□□□□□ -0.99
PUDP-204ENST00000486446 CHMP3Q9Y3E7 222 aa8.88□□□□□ -0.99
PUDP-204ENST00000486446 RTL9Q8NET4 1388 aa8.87□□□□□ -0.99
PUDP-204ENST00000486446 XDHP47989 1333 aa8.87□□□□□ -0.99
PUDP-204ENST00000486446 TNRC18O15417 2968 aaPredicted RBP8.87□□□□□ -0.99
PUDP-204ENST00000486446 ADAMTSL1Q8N6G6 1762 aa8.87□□□□□ -0.99
PUDP-204ENST00000486446 YDJCA8MPS7 323 aa8.87□□□□□ -0.99
PUDP-204ENST00000486446 ECE2O60344 883 aa8.87□□□□□ -0.99
PUDP-204ENST00000486446 ATP2B4P23634 1241 aa8.87□□□□□ -0.99
PUDP-204ENST00000486446 CASP7P55210 303 aa8.87□□□□□ -0.99
PUDP-204ENST00000486446 USP50Q70EL3 339 aaPredicted RBP8.87□□□□□ -0.99
PUDP-204ENST00000486446 CNTROBQ8N137 903 aa8.87□□□□□ -0.99
PUDP-204ENST00000486446 PLA2G12BQ9BX93 195 aa8.87□□□□□ -0.99
PUDP-204ENST00000486446 API5Q9BZZ5 524 aaKnown RBP8.87□□□□□ -0.99
PUDP-204ENST00000486446 ADARB2Q9NS39 739 aaKnown RBP8.87□□□□□ -0.99
PUDP-204ENST00000486446 C9orf78Q9NZ63 289 aaPredicted RBP8.87□□□□□ -0.99
PUDP-204ENST00000486446 GPRC5DQ9NZD1 345 aa8.87□□□□□ -0.99
PUDP-204ENST00000486446 PDE4DIPQ5VU43 2346 aa8.87□□□□□ -0.99
PUDP-204ENST00000486446 ANKRD18BA2A2Z9 1011 aa8.86□□□□□ -0.99
PUDP-204ENST00000486446 GRM8O00222 908 aa8.86□□□□□ -0.99
PUDP-204ENST00000486446 ZBTB7BO15156 539 aaPredicted RBP8.86□□□□□ -0.99
PUDP-204ENST00000486446 ALDH1L1O75891 902 aa8.86□□□□□ -0.99
PUDP-204ENST00000486446 ITGA6P23229 1130 aa8.86□□□□□ -0.99
PUDP-204ENST00000486446 TRIM46Q7Z4K8 759 aa8.86□□□□□ -0.99
PUDP-204ENST00000486446 SMC5Q8IY18 1101 aa8.86□□□□□ -0.99
PUDP-204ENST00000486446 ITPKCQ96DU7 683 aa8.86□□□□□ -0.99
PUDP-204ENST00000486446 MPHOSPH8Q99549 860 aa8.86□□□□□ -0.99
PUDP-204ENST00000486446 SRCIN1Q9C0H9 1055 aa8.86□□□□□ -0.99
PUDP-204ENST00000486446 BSDC1Q9NW68 430 aaPredicted RBP8.86□□□□□ -0.99
PUDP-204ENST00000486446 PASKQ96RG2 1323 aa8.85□□□□□ -0.99
PUDP-204ENST00000486446 H7C1D1 291 aa8.85□□□□□ -0.99
PUDP-204ENST00000486446 PSMD14O00487 310 aa8.85□□□□□ -0.99
PUDP-204ENST00000486446 ZIC2O95409 532 aaPredicted RBP8.85□□□□□ -0.99
PUDP-204ENST00000486446 CSF1RP07333 972 aa8.85□□□□□ -0.99
PUDP-204ENST00000486446 FOXO4P98177 505 aa8.85□□□□□ -0.99
PUDP-204ENST00000486446 NR1H3Q13133 447 aa8.85□□□□□ -0.99
PUDP-204ENST00000486446 IFIT5Q13325 482 aaKnown RBP8.85□□□□□ -0.99
PUDP-204ENST00000486446 MCM6Q14566 821 aa8.85□□□□□ -0.99
PUDP-204ENST00000486446 INTS3Q68E01 1043 aaKnown RBP8.85□□□□□ -0.99
PUDP-204ENST00000486446 CCDC116Q8IYX3 515 aa8.85□□□□□ -0.99
PUDP-204ENST00000486446 ANKRD2Q9GZV1 360 aa8.85□□□□□ -0.99
PUDP-204ENST00000486446 ZFAND3Q9H8U3 227 aa8.85□□□□□ -0.99
PUDP-204ENST00000486446 CNOT7Q9UIV1 285 aaKnown RBP8.85□□□□□ -0.99
PUDP-204ENST00000486446 MINPP1Q9UNW1 487 aa8.85□□□□□ -0.99
PUDP-204ENST00000486446 PTPRCP08575 1304 aa8.84□□□□□ -0.99
PUDP-204ENST00000486446 SHTN1A0MZ66 631 aa8.84□□□□□ -0.99
PUDP-204ENST00000486446 TMEM88BA6NKF7 163 aa8.84□□□□□ -0.99
PUDP-204ENST00000486446 ESPNB1AK53 854 aa8.84□□□□□ -0.99
PUDP-204ENST00000486446 KCNJ4P48050 445 aa8.84□□□□□ -0.99
PUDP-204ENST00000486446 CCT4P50991 539 aaKnown RBP8.84□□□□□ -0.99
PUDP-204ENST00000486446 MAP2K1Q02750 393 aaPredicted RBP8.84□□□□□ -0.99
PUDP-204ENST00000486446 TAF7LQ5H9L4 462 aa8.84□□□□□ -0.99
PUDP-204ENST00000486446 INTS6LQ5JSJ4 861 aaKnown RBP8.84□□□□□ -0.99
PUDP-204ENST00000486446 LMBR1LQ6UX01 489 aa8.84□□□□□ -0.99
PUDP-204ENST00000486446 KCNQ5Q9NR82 932 aa8.84□□□□□ -0.99
PUDP-204ENST00000486446 WTIPA6NIX2 430 aaPredicted RBP8.83□□□□□ -1
PUDP-204ENST00000486446 RPS12P25398 132 aaKnown RBP8.83□□□□□ -1
PUDP-204ENST00000486446 DEKP35659 375 aaKnown RBP8.83□□□□□ -1
PUDP-204ENST00000486446 CHRNDQ07001 517 aa8.83□□□□□ -1
PUDP-204ENST00000486446 CCDC57Q2TAC2 916 aa8.83□□□□□ -1
PUDP-204ENST00000486446 NBPF20Q3BBV1 942 aa8.83□□□□□ -1
PUDP-204ENST00000486446 TBC1D10BQ4KMP7 808 aaPredicted RBP8.83□□□□□ -1
PUDP-204ENST00000486446 EPHA10Q5JZY3 1008 aa8.83□□□□□ -1
PUDP-204ENST00000486446 PPP1R26Q5T8A7 1209 aaPredicted RBP8.83□□□□□ -1
PUDP-204ENST00000486446 SKAP1Q86WV1 359 aa8.83□□□□□ -1
PUDP-204ENST00000486446 TMEM57Q8N5G2 664 aa8.83□□□□□ -1
PUDP-204ENST00000486446 TRPM4Q8TD43 1214 aa8.83□□□□□ -1
PUDP-204ENST00000486446 DPF2Q92785 391 aa8.83□□□□□ -1
PUDP-204ENST00000486446 GCC1Q96CN9 775 aa8.83□□□□□ -1
PUDP-204ENST00000486446 TRIM47Q96LD4 638 aa8.83□□□□□ -1
PUDP-204ENST00000486446 SENP2Q9HC62 589 aa8.83□□□□□ -1
PUDP-204ENST00000486446 LEMD3Q9Y2U8 911 aa8.83□□□□□ -1
PUDP-204ENST00000486446 MED23Q9ULK4 1368 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms