RNA–Protein interactions for RNA: ENST00000486239.1

DCLK1-207, Transcript of doublecortin like kinase 1, humanhuman

TSL 3

Gene DCLK1, Length 578 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-207ENST00000486239 TRIM34Q9BYJ4 488 aa16.6■□□□□ 0.25
DCLK1-207ENST00000486239 TLR7Q9NYK1 1049 aaKnown RBP16.6■□□□□ 0.25
DCLK1-207ENST00000486239 ZHX2Q9Y6X8 837 aa16.6■□□□□ 0.25
DCLK1-207ENST00000486239 HLA-DOAP06340 250 aa16.59■□□□□ 0.25
DCLK1-207ENST00000486239 LACTBP83111 547 aaPredicted RBP16.59■□□□□ 0.25
DCLK1-207ENST00000486239 NBPF11Q86T75 865 aa16.59■□□□□ 0.25
DCLK1-207ENST00000486239 SH3RF3Q8TEJ3 882 aaPredicted RBP16.59■□□□□ 0.25
DCLK1-207ENST00000486239 AS3MTQ9HBK9 375 aa16.59■□□□□ 0.25
DCLK1-207ENST00000486239 PNMA3Q9UL41 463 aa16.59■□□□□ 0.25
DCLK1-207ENST00000486239 AFG3L2Q9Y4W6 797 aa16.59■□□□□ 0.25
DCLK1-207ENST00000486239 FLT1P17948 1338 aa16.59■□□□□ 0.25
DCLK1-207ENST00000486239 LOC285556D6RIA3 1793 aa16.59■□□□□ 0.25
DCLK1-207ENST00000486239 PDE4DIPQ5VU43 2346 aa16.58■□□□□ 0.25
DCLK1-207ENST00000486239 ASNSP08243 561 aa16.58■□□□□ 0.24
DCLK1-207ENST00000486239 CYP7A1P22680 504 aa16.58■□□□□ 0.24
DCLK1-207ENST00000486239 HOXD10P28358 340 aa16.58■□□□□ 0.24
DCLK1-207ENST00000486239 SOX10P56693 466 aa16.58■□□□□ 0.24
DCLK1-207ENST00000486239 PABPC4Q13310 644 aaKnown RBP eCLIP16.58■□□□□ 0.24
DCLK1-207ENST00000486239 FOXP4Q8IVH2 680 aaPredicted RBP16.58■□□□□ 0.24
DCLK1-207ENST00000486239 PROCA1Q8NCQ7 364 aaPredicted RBP16.58■□□□□ 0.24
DCLK1-207ENST00000486239 ARMC5Q96C12 935 aa16.58■□□□□ 0.24
DCLK1-207ENST00000486239 PIH1D3Q9NQM4 214 aaKnown RBP16.58■□□□□ 0.24
DCLK1-207ENST00000486239 MYH1P12882 1939 aa16.58■□□□□ 0.24
DCLK1-207ENST00000486239 SIPA1L1O43166 1804 aa16.57■□□□□ 0.24
DCLK1-207ENST00000486239 CAP2P40123 477 aa16.57■□□□□ 0.24
DCLK1-207ENST00000486239 C17orf99Q6UX52 265 aa16.57■□□□□ 0.24
DCLK1-207ENST00000486239 METTL16Q86W50 562 aaKnown RBP16.57■□□□□ 0.24
DCLK1-207ENST00000486239 CRACR2BQ8N4Y2 399 aaPredicted RBP16.57■□□□□ 0.24
DCLK1-207ENST00000486239 IL1RAPL2Q9NP60 686 aa16.57■□□□□ 0.24
DCLK1-207ENST00000486239 TAOK2Q9UL54 1235 aa16.57■□□□□ 0.24
DCLK1-207ENST00000486239 ADGRA2Q96PE1 1338 aa16.56■□□□□ 0.24
DCLK1-207ENST00000486239 MOGSQ13724 837 aa16.56■□□□□ 0.24
DCLK1-207ENST00000486239 SLC9C1Q4G0N8 1177 aa16.56■□□□□ 0.24
DCLK1-207ENST00000486239 MAGEB6Q8N7X4 407 aa16.56■□□□□ 0.24
DCLK1-207ENST00000486239 TGFBRAP1Q8WUH2 860 aa16.56■□□□□ 0.24
DCLK1-207ENST00000486239 AGTPBP1Q9UPW5 1226 aa16.56■□□□□ 0.24
DCLK1-207ENST00000486239 CENPFP49454 3210 aa16.56■□□□□ 0.24
DCLK1-207ENST00000486239 MGAMO43451 1857 aa16.55■□□□□ 0.24
DCLK1-207ENST00000486239 NAV1Q8NEY1 1877 aa16.55■□□□□ 0.24
DCLK1-207ENST00000486239 USP17L5A8MUK1 530 aa16.55■□□□□ 0.24
DCLK1-207ENST00000486239 USP5P45974 858 aa16.55■□□□□ 0.24
DCLK1-207ENST00000486239 GADL1Q6ZQY3 521 aa16.55■□□□□ 0.24
DCLK1-207ENST00000486239 ADGRA1Q86SQ6 560 aa16.55■□□□□ 0.24
DCLK1-207ENST00000486239 MAPKAPK5Q8IW41 473 aa16.55■□□□□ 0.24
DCLK1-207ENST00000486239 ZNF280CQ8ND82 737 aa16.55■□□□□ 0.24
DCLK1-207ENST00000486239 SMCR8Q8TEV9 937 aaPredicted RBP16.55■□□□□ 0.24
DCLK1-207ENST00000486239 MYH7P12883 1935 aa16.55■□□□□ 0.24
DCLK1-207ENST00000486239 TRIM75PA6NK02 468 aa16.54■□□□□ 0.24
DCLK1-207ENST00000486239 GPAT2Q6NUI2 795 aa16.54■□□□□ 0.24
DCLK1-207ENST00000486239 TTC6Q86TZ1 520 aa16.54■□□□□ 0.24
DCLK1-207ENST00000486239 SIRT2Q8IXJ6 389 aa16.54■□□□□ 0.24
DCLK1-207ENST00000486239 LRRCC1Q9C099 1032 aa16.54■□□□□ 0.24
DCLK1-207ENST00000486239 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.54■□□□□ 0.24
DCLK1-207ENST00000486239 EHD4Q9H223 541 aa16.54■□□□□ 0.24
DCLK1-207ENST00000486239 DDX60LQ5H9U9 1706 aaKnown RBP16.53■□□□□ 0.24
DCLK1-207ENST00000486239 BCRP11274 1271 aa16.53■□□□□ 0.24
DCLK1-207ENST00000486239 FCGRTP55899 365 aa16.53■□□□□ 0.24
DCLK1-207ENST00000486239 WDR18Q9BV38 432 aa16.53■□□□□ 0.24
DCLK1-207ENST00000486239 TMEM106CQ9BVX2 250 aa16.53■□□□□ 0.24
DCLK1-207ENST00000486239 CPA4Q9UI42 421 aa16.53■□□□□ 0.24
DCLK1-207ENST00000486239 KIAA0100Q14667 2235 aaKnown RBP16.53■□□□□ 0.24
DCLK1-207ENST00000486239 ATP5JP18859 108 aa16.52■□□□□ 0.24
DCLK1-207ENST00000486239 GCLCP48506 637 aaPredicted RBP16.52■□□□□ 0.24
DCLK1-207ENST00000486239 GPATCH3Q96I76 525 aa16.52■□□□□ 0.24
DCLK1-207ENST00000486239 ZNF333Q96JL9 665 aa16.52■□□□□ 0.24
DCLK1-207ENST00000486239 CRNKL1Q9BZJ0 848 aaKnown RBP16.52■□□□□ 0.24
DCLK1-207ENST00000486239 SERPINB13Q9UIV8 391 aa16.52■□□□□ 0.24
DCLK1-207ENST00000486239 MAGEB6P1A0A0J9YX57 407 aa16.51■□□□□ 0.23
DCLK1-207ENST00000486239 FAM196BA6NMK8 535 aa16.51■□□□□ 0.23
DCLK1-207ENST00000486239 C19orf81C9J6K1 198 aa16.51■□□□□ 0.23
DCLK1-207ENST00000486239 APBB1O00213 710 aa16.51■□□□□ 0.23
DCLK1-207ENST00000486239 FMNL1O95466 1100 aaPredicted RBP16.51■□□□□ 0.23
DCLK1-207ENST00000486239 OSBPP22059 807 aa16.51■□□□□ 0.23
DCLK1-207ENST00000486239 PSMC4P43686 418 aa16.51■□□□□ 0.23
DCLK1-207ENST00000486239 SPP2Q13103 211 aa16.51■□□□□ 0.23
DCLK1-207ENST00000486239 SH3D19Q5HYK7 790 aa16.51■□□□□ 0.23
DCLK1-207ENST00000486239 SLC9C2Q5TAH2 1124 aa16.51■□□□□ 0.23
DCLK1-207ENST00000486239 ZSCAN25Q6NSZ9 544 aa16.51■□□□□ 0.23
DCLK1-207ENST00000486239 MIGA1Q8NAN2 632 aa16.51■□□□□ 0.23
DCLK1-207ENST00000486239 DNAJC2Q99543 621 aaKnown RBP16.51■□□□□ 0.23
DCLK1-207ENST00000486239 ANTXR1Q9H6X2 564 aa16.51■□□□□ 0.23
DCLK1-207ENST00000486239 PAG1Q9NWQ8 432 aa16.51■□□□□ 0.23
DCLK1-207ENST00000486239 TMOD4Q9NZQ9 345 aa16.51■□□□□ 0.23
DCLK1-207ENST00000486239 SRRDQ9UH36 339 aa16.51■□□□□ 0.23
DCLK1-207ENST00000486239 PALD1Q9ULE6 856 aa16.51■□□□□ 0.23
DCLK1-207ENST00000486239 PTCH2Q9Y6C5 1203 aa16.51■□□□□ 0.23
DCLK1-207ENST00000486239 TNRC18O15417 2968 aaPredicted RBP16.5■□□□□ 0.23
DCLK1-207ENST00000486239 GOLIM4O00461 696 aa16.5■□□□□ 0.23
DCLK1-207ENST00000486239 CYP2C8P10632 490 aa16.5■□□□□ 0.23
DCLK1-207ENST00000486239 PDE6AP16499 860 aa16.5■□□□□ 0.23
DCLK1-207ENST00000486239 DYNLL1P63167 89 aaKnown RBP16.5■□□□□ 0.23
DCLK1-207ENST00000486239 FAM110CQ1W6H9 321 aa16.5■□□□□ 0.23
DCLK1-207ENST00000486239 RAET1EQ8TD07 263 aa16.5■□□□□ 0.23
DCLK1-207ENST00000486239 GTF3C2Q8WUA4 911 aaPredicted RBP16.5■□□□□ 0.23
DCLK1-207ENST00000486239 RIOK1Q9BRS2 568 aaKnown RBP16.5■□□□□ 0.23
DCLK1-207ENST00000486239 ZSWIM8A7E2V4 1837 aa16.49■□□□□ 0.23
DCLK1-207ENST00000486239 MYPNQ86TC9 1320 aa16.49■□□□□ 0.23
DCLK1-207ENST00000486239 MYH8P13535 1937 aa16.49■□□□□ 0.23
DCLK1-207ENST00000486239 CAPN2P17655 700 aa16.49■□□□□ 0.23
DCLK1-207ENST00000486239 BACE1P56817 501 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms