RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 TRIM34Q9BYJ4 488 aa16.72■□□□□ 0.27
PCIF1-202ENST00000479348 ARPP21Q9UBL0 812 aaPredicted RBP16.72■□□□□ 0.27
PCIF1-202ENST00000479348 SERPINB13Q9UIV8 391 aa16.72■□□□□ 0.27
PCIF1-202ENST00000479348 CSADQ9Y600 493 aa16.72■□□□□ 0.27
PCIF1-202ENST00000479348 CCDC171Q6TFL3 1326 aa16.72■□□□□ 0.27
PCIF1-202ENST00000479348 RAD50Q92878 1312 aa16.72■□□□□ 0.27
PCIF1-202ENST00000479348 MYH1P12882 1939 aa16.72■□□□□ 0.27
PCIF1-202ENST00000479348 PHF20L1A8MW92 1017 aa16.71■□□□□ 0.27
PCIF1-202ENST00000479348 USP17L12C9JPN9 530 aa16.71■□□□□ 0.27
PCIF1-202ENST00000479348 USP17L21D6R901 530 aa16.71■□□□□ 0.27
PCIF1-202ENST00000479348 HTRA3P83110 453 aa16.71■□□□□ 0.27
PCIF1-202ENST00000479348 ALX1Q15699 326 aa16.71■□□□□ 0.27
PCIF1-202ENST00000479348 C12orf60Q5U649 245 aa16.71■□□□□ 0.27
PCIF1-202ENST00000479348 CTR9Q6PD62 1173 aa16.71■□□□□ 0.27
PCIF1-202ENST00000479348 CCDC129Q6ZRS4 1044 aa16.71■□□□□ 0.27
PCIF1-202ENST00000479348 IFNL3Q8IZI9 196 aa16.71■□□□□ 0.27
PCIF1-202ENST00000479348 SLC10A4Q96EP9 437 aa16.71■□□□□ 0.27
PCIF1-202ENST00000479348 FZD1Q9UP38 647 aa16.71■□□□□ 0.27
PCIF1-202ENST00000479348 DDX60LQ5H9U9 1706 aaKnown RBP16.71■□□□□ 0.27
PCIF1-202ENST00000479348 CTNND1O60716 968 aaKnown RBP16.7■□□□□ 0.26
PCIF1-202ENST00000479348 TDO2P48775 406 aa16.7■□□□□ 0.26
PCIF1-202ENST00000479348 PLCD1P51178 756 aa16.7■□□□□ 0.26
PCIF1-202ENST00000479348 ZNF157P51786 506 aaPredicted RBP16.7■□□□□ 0.26
PCIF1-202ENST00000479348 NOL9Q5SY16 702 aaKnown RBP16.7■□□□□ 0.26
PCIF1-202ENST00000479348 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.7■□□□□ 0.26
PCIF1-202ENST00000479348 ZNF589Q86UQ0 364 aaPredicted RBP16.7■□□□□ 0.26
PCIF1-202ENST00000479348 NAPBQ9H115 298 aa16.7■□□□□ 0.26
PCIF1-202ENST00000479348 EPB41L4AQ9HCS5 686 aaPredicted RBP16.7■□□□□ 0.26
PCIF1-202ENST00000479348 NAV1Q8NEY1 1877 aa16.7■□□□□ 0.26
PCIF1-202ENST00000479348 GABPAQ06546 454 aa16.7■□□□□ 0.26
PCIF1-202ENST00000479348 DNAJC5GQ8N7S2 189 aa16.7■□□□□ 0.26
PCIF1-202ENST00000479348 GINM1Q9NU53 330 aa16.7■□□□□ 0.26
PCIF1-202ENST00000479348 SWAP70Q9UH65 585 aa16.7■□□□□ 0.26
PCIF1-202ENST00000479348 ZMYM6O95789 1325 aa16.69■□□□□ 0.26
PCIF1-202ENST00000479348 FOXP2O15409 715 aa16.69■□□□□ 0.26
PCIF1-202ENST00000479348 HSPD1P10809 573 aaKnown RBP16.69■□□□□ 0.26
PCIF1-202ENST00000479348 INPP5BP32019 993 aa16.69■□□□□ 0.26
PCIF1-202ENST00000479348 VGLL4Q14135 290 aa16.69■□□□□ 0.26
PCIF1-202ENST00000479348 CASC1Q6TDU7 716 aa16.69■□□□□ 0.26
PCIF1-202ENST00000479348 PAXIP1Q6ZW49 1069 aaPredicted RBP16.69■□□□□ 0.26
PCIF1-202ENST00000479348 CAPNS2Q96L46 248 aa16.69■□□□□ 0.26
PCIF1-202ENST00000479348 DSCC1Q9BVC3 393 aa16.69■□□□□ 0.26
PCIF1-202ENST00000479348 WDR33Q9C0J8 1336 aaKnown RBP16.68■□□□□ 0.26
PCIF1-202ENST00000479348 FAM196BA6NMK8 535 aa16.68■□□□□ 0.26
PCIF1-202ENST00000479348 SGSM2O43147 1006 aa16.68■□□□□ 0.26
PCIF1-202ENST00000479348 CDC45O75419 566 aa16.68■□□□□ 0.26
PCIF1-202ENST00000479348 SLC10A3P09131 477 aa16.68■□□□□ 0.26
PCIF1-202ENST00000479348 CAP2P40123 477 aa16.68■□□□□ 0.26
PCIF1-202ENST00000479348 NOGQ13253 232 aa16.68■□□□□ 0.26
PCIF1-202ENST00000479348 SLC4A8Q2Y0W8 1093 aa16.68■□□□□ 0.26
PCIF1-202ENST00000479348 VPS53Q5VIR6 699 aa16.68■□□□□ 0.26
PCIF1-202ENST00000479348 CYP4F22Q6NT55 531 aa16.68■□□□□ 0.26
PCIF1-202ENST00000479348 TATDN1Q6P1N9 297 aa16.68■□□□□ 0.26
PCIF1-202ENST00000479348 ERO1BQ86YB8 467 aa16.68■□□□□ 0.26
PCIF1-202ENST00000479348 RASAL3Q86YV0 1011 aa16.68■□□□□ 0.26
PCIF1-202ENST00000479348 SCYL3Q8IZE3 742 aa16.68■□□□□ 0.26
PCIF1-202ENST00000479348 ZKSCAN4Q969J2 545 aaPredicted RBP16.68■□□□□ 0.26
PCIF1-202ENST00000479348 CLMNQ96JQ2 1002 aa16.68■□□□□ 0.26
PCIF1-202ENST00000479348 DNAJC18Q9H819 358 aa16.68■□□□□ 0.26
PCIF1-202ENST00000479348 SPDYE5A6NIY4 337 aa16.67■□□□□ 0.26
PCIF1-202ENST00000479348 FAM155AB1AL88 458 aaPredicted RBP16.67■□□□□ 0.26
PCIF1-202ENST00000479348 ZBTB48P10074 688 aaPredicted RBP16.67■□□□□ 0.26
PCIF1-202ENST00000479348 CYP2D6P10635 497 aa16.67■□□□□ 0.26
PCIF1-202ENST00000479348 MAP2K2P36507 400 aa16.67■□□□□ 0.26
PCIF1-202ENST00000479348 VEGFBP49765 207 aa16.67■□□□□ 0.26
PCIF1-202ENST00000479348 C16orf86Q6ZW13 317 aa16.67■□□□□ 0.26
PCIF1-202ENST00000479348 ZNF287Q9HBT7 754 aa16.67■□□□□ 0.26
PCIF1-202ENST00000479348 PICK1Q9NRD5 415 aa16.67■□□□□ 0.26
PCIF1-202ENST00000479348 SNCAIPQ9Y6H5 919 aa16.67■□□□□ 0.26
PCIF1-202ENST00000479348 SIPA1L1O43166 1804 aa16.67■□□□□ 0.26
PCIF1-202ENST00000479348 BAZ2AQ9UIF9 1905 aaKnown RBP16.66■□□□□ 0.26
PCIF1-202ENST00000479348 ROBO3Q96MS0 1386 aa16.66■□□□□ 0.26
PCIF1-202ENST00000479348 CYP2D7A0A087X1C5 515 aa16.66■□□□□ 0.26
PCIF1-202ENST00000479348 MINDY4BA8MYZ0 360 aa16.66■□□□□ 0.26
PCIF1-202ENST00000479348 FGAP02671 866 aa16.66■□□□□ 0.26
PCIF1-202ENST00000479348 SLC3A2P08195 630 aaKnown RBP16.66■□□□□ 0.26
PCIF1-202ENST00000479348 SLURP2P0DP57 97 aa16.66■□□□□ 0.26
PCIF1-202ENST00000479348 CERKLQ49MI3 558 aaPredicted RBP16.66■□□□□ 0.26
PCIF1-202ENST00000479348 IFFO2Q5TF58 517 aa16.66■□□□□ 0.26
PCIF1-202ENST00000479348 SPRYD7Q5W111 196 aa16.66■□□□□ 0.26
PCIF1-202ENST00000479348 REM2Q8IYK8 340 aaPredicted RBP16.66■□□□□ 0.26
PCIF1-202ENST00000479348 CCDC17Q96LX7 622 aa16.66■□□□□ 0.26
PCIF1-202ENST00000479348 TBC1D2Q9BYX2 928 aa16.66■□□□□ 0.26
PCIF1-202ENST00000479348 ELP3Q9H9T3 547 aa16.66■□□□□ 0.26
PCIF1-202ENST00000479348 ANAPC4Q9UJX5 808 aa16.66■□□□□ 0.26
PCIF1-202ENST00000479348 ASNSP08243 561 aa16.65■□□□□ 0.26
PCIF1-202ENST00000479348 SHMT1P34896 483 aa16.65■□□□□ 0.26
PCIF1-202ENST00000479348 CDK8P49336 464 aa16.65■□□□□ 0.26
PCIF1-202ENST00000479348 PPATQ06203 517 aa16.65■□□□□ 0.26
PCIF1-202ENST00000479348 PPARAQ07869 468 aa16.65■□□□□ 0.26
PCIF1-202ENST00000479348 OPTNQ96CV9 577 aa16.65■□□□□ 0.26
PCIF1-202ENST00000479348 WNK4Q96J92 1243 aa16.65■□□□□ 0.26
PCIF1-202ENST00000479348 ESYT1Q9BSJ8 1104 aa16.65■□□□□ 0.26
PCIF1-202ENST00000479348 CTNNA3Q9UI47 895 aa16.65■□□□□ 0.26
PCIF1-202ENST00000479348 GTF3C3Q9Y5Q9 886 aa16.65■□□□□ 0.26
PCIF1-202ENST00000479348 CEP350Q5VT06 3117 aa16.64■□□□□ 0.25
PCIF1-202ENST00000479348 OTOFQ9HC10 1997 aa16.64■□□□□ 0.25
PCIF1-202ENST00000479348 PTPRAP18433 802 aa16.64■□□□□ 0.25
PCIF1-202ENST00000479348 PDE4BQ07343 736 aa16.64■□□□□ 0.25
PCIF1-202ENST00000479348 PPIL2Q13356 520 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms