RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 SLAIN2Q9P270 581 aa17.74■□□□□ 0.43
PTPN13-204ENST00000436978 PTPRTO14522 1441 aa17.74■□□□□ 0.43
PTPN13-204ENST00000436978 KRT24Q2M2I5 525 aa17.74■□□□□ 0.43
PTPN13-204ENST00000436978 PIK3AP1Q6ZUJ8 805 aa17.74■□□□□ 0.43
PTPN13-204ENST00000436978 KDM3AQ9Y4C1 1321 aa17.74■□□□□ 0.43
PTPN13-204ENST00000436978 TUBB2AQ13885 445 aa17.74■□□□□ 0.43
PTPN13-204ENST00000436978 TUBB2BQ9BVA1 445 aa17.74■□□□□ 0.43
PTPN13-204ENST00000436978 DNM2P50570 870 aa17.74■□□□□ 0.43
PTPN13-204ENST00000436978 VAV2P52735 878 aa17.74■□□□□ 0.43
PTPN13-204ENST00000436978 PDE4DQ08499 809 aa17.73■□□□□ 0.43
PTPN13-204ENST00000436978 ABCA8O94911 1581 aa17.73■□□□□ 0.43
PTPN13-204ENST00000436978 M0QZ92 97 aa17.73■□□□□ 0.43
PTPN13-204ENST00000436978 NOX5Q96PH1 765 aa17.73■□□□□ 0.43
PTPN13-204ENST00000436978 ATP10DQ9P241 1426 aa17.73■□□□□ 0.43
PTPN13-204ENST00000436978 CYP26C1Q6V0L0 522 aa17.73■□□□□ 0.43
PTPN13-204ENST00000436978 CHMP2AO43633 222 aa17.73■□□□□ 0.43
PTPN13-204ENST00000436978 SLU7O95391 586 aaKnown RBP17.73■□□□□ 0.43
PTPN13-204ENST00000436978 TCIRG1Q13488 830 aa17.73■□□□□ 0.43
PTPN13-204ENST00000436978 AKNAD1Q5T1N1 836 aa17.73■□□□□ 0.43
PTPN13-204ENST00000436978 DDX23Q9BUQ8 820 aaKnown RBP17.73■□□□□ 0.43
PTPN13-204ENST00000436978 FAM169AQ9Y6X4 670 aa17.73■□□□□ 0.43
PTPN13-204ENST00000436978 NLRP1Q9C000 1473 aa17.73■□□□□ 0.43
PTPN13-204ENST00000436978 CALCOCO2Q13137 446 aa17.73■□□□□ 0.43
PTPN13-204ENST00000436978 TTC38Q5R3I4 469 aa17.73■□□□□ 0.43
PTPN13-204ENST00000436978 USP19O94966 1318 aa17.72■□□□□ 0.43
PTPN13-204ENST00000436978 PRIM1P49642 420 aaKnown RBP17.72■□□□□ 0.43
PTPN13-204ENST00000436978 BAG1Q99933 345 aaPredicted RBP17.72■□□□□ 0.43
PTPN13-204ENST00000436978 KCNH3Q9ULD8 1083 aa17.72■□□□□ 0.43
PTPN13-204ENST00000436978 SSH2Q76I76 1423 aa17.72■□□□□ 0.43
PTPN13-204ENST00000436978 STX17P56962 302 aa17.72■□□□□ 0.43
PTPN13-204ENST00000436978 TIMM10P62072 90 aa17.72■□□□□ 0.43
PTPN13-204ENST00000436978 SMC6Q96SB8 1091 aa17.72■□□□□ 0.43
PTPN13-204ENST00000436978 PNMA2Q9UL42 364 aa17.72■□□□□ 0.43
PTPN13-204ENST00000436978 DNM3Q9UQ16 869 aa17.72■□□□□ 0.43
PTPN13-204ENST00000436978 HACE1Q8IYU2 909 aa17.72■□□□□ 0.43
PTPN13-204ENST00000436978 IQCDQ96DY2 449 aa17.72■□□□□ 0.43
PTPN13-204ENST00000436978 MAP7D1Q3KQU3 841 aa17.72■□□□□ 0.43
PTPN13-204ENST00000436978 DSCC1Q9BVC3 393 aa17.72■□□□□ 0.43
PTPN13-204ENST00000436978 ASIC2Q16515 512 aa17.72■□□□□ 0.43
PTPN13-204ENST00000436978 YEATS2Q9ULM3 1422 aa17.71■□□□□ 0.43
PTPN13-204ENST00000436978 KIFC2Q96AC6 838 aa17.71■□□□□ 0.43
PTPN13-204ENST00000436978 PLIN2Q99541 437 aa17.71■□□□□ 0.43
PTPN13-204ENST00000436978 PKD2L1Q9P0L9 805 aa17.71■□□□□ 0.43
PTPN13-204ENST00000436978 QRICH2Q9H0J4 1663 aa17.71■□□□□ 0.43
PTPN13-204ENST00000436978 TTC16Q8NEE8 873 aa17.71■□□□□ 0.43
PTPN13-204ENST00000436978 FBF1Q8TES7 1133 aa17.71■□□□□ 0.43
PTPN13-204ENST00000436978 FCHSD1Q86WN1 690 aa17.71■□□□□ 0.43
PTPN13-204ENST00000436978 ZNF532Q9HCE3 1301 aa17.71■□□□□ 0.42
PTPN13-204ENST00000436978 PAK1Q13153 545 aa17.71■□□□□ 0.42
PTPN13-204ENST00000436978 ORAI2Q96SN7 254 aa17.71■□□□□ 0.42
PTPN13-204ENST00000436978 ZNF569Q5MCW4 686 aa17.7■□□□□ 0.42
PTPN13-204ENST00000436978 TEKT1Q969V4 418 aa17.7■□□□□ 0.42
PTPN13-204ENST00000436978 CAPZA3Q96KX2 299 aa17.7■□□□□ 0.42
PTPN13-204ENST00000436978 A0A1B0GVL5 298 aa17.7■□□□□ 0.42
PTPN13-204ENST00000436978 GNA14O95837 355 aa17.7■□□□□ 0.42
PTPN13-204ENST00000436978 MYCLP12524 364 aaPredicted RBP17.7■□□□□ 0.42
PTPN13-204ENST00000436978 OTUD6AQ7L8S5 288 aa17.7■□□□□ 0.42
PTPN13-204ENST00000436978 ZNF594Q96JF6 807 aaPredicted RBP17.7■□□□□ 0.42
PTPN13-204ENST00000436978 NEURL1BA8MQ27 555 aa17.7■□□□□ 0.42
PTPN13-204ENST00000436978 E7EVH7 732 aa17.7■□□□□ 0.42
PTPN13-204ENST00000436978 BCRP11274 1271 aa17.7■□□□□ 0.42
PTPN13-204ENST00000436978 P4HA1P13674 534 aa17.7■□□□□ 0.42
PTPN13-204ENST00000436978 TNFAIP3P21580 790 aa17.7■□□□□ 0.42
PTPN13-204ENST00000436978 NONOQ15233 471 aaKnown RBP eCLIP17.7■□□□□ 0.42
PTPN13-204ENST00000436978 G2E3Q7L622 706 aa17.7■□□□□ 0.42
PTPN13-204ENST00000436978 MAGI2Q86UL8 1455 aa17.7■□□□□ 0.42
PTPN13-204ENST00000436978 H7C1D1 291 aa17.7■□□□□ 0.42
PTPN13-204ENST00000436978 POLR2DO15514 142 aaKnown RBP17.7■□□□□ 0.42
PTPN13-204ENST00000436978 CCDC122Q5T0U0 273 aa17.7■□□□□ 0.42
PTPN13-204ENST00000436978 NT5C3AQ9H0P0 336 aa17.69■□□□□ 0.42
PTPN13-204ENST00000436978 CETN3O15182 167 aa17.69■□□□□ 0.42
PTPN13-204ENST00000436978 GTF2F1P35269 517 aaKnown RBP eCLIP17.69■□□□□ 0.42
PTPN13-204ENST00000436978 UTP11Q9Y3A2 253 aaKnown RBP17.69■□□□□ 0.42
PTPN13-204ENST00000436978 INF2Q27J81 1249 aa17.69■□□□□ 0.42
PTPN13-204ENST00000436978 MSL1Q68DK7 614 aa17.69■□□□□ 0.42
PTPN13-204ENST00000436978 NCAPH2Q6IBW4 605 aa17.69■□□□□ 0.42
PTPN13-204ENST00000436978 SUCLG2Q96I99 432 aa17.69■□□□□ 0.42
PTPN13-204ENST00000436978 BEGAINQ9BUH8 593 aa17.69■□□□□ 0.42
PTPN13-204ENST00000436978 ZBTB16Q05516 673 aa17.69■□□□□ 0.42
PTPN13-204ENST00000436978 DBNDD2Q9BQY9 259 aa17.69■□□□□ 0.42
PTPN13-204ENST00000436978 YWHAEP62258 255 aaKnown RBP17.69■□□□□ 0.42
PTPN13-204ENST00000436978 LZTFL1Q9NQ48 299 aa17.69■□□□□ 0.42
PTPN13-204ENST00000436978 V9GY48 417 aaPredicted RBP17.69■□□□□ 0.42
PTPN13-204ENST00000436978 TAF5LO75529 589 aa17.69■□□□□ 0.42
PTPN13-204ENST00000436978 DLGAP5Q15398 846 aa17.69■□□□□ 0.42
PTPN13-204ENST00000436978 CFAP157Q5JU67 520 aa17.69■□□□□ 0.42
PTPN13-204ENST00000436978 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.69■□□□□ 0.42
PTPN13-204ENST00000436978 TTF2Q9UNY4 1162 aaKnown RBP17.69■□□□□ 0.42
PTPN13-204ENST00000436978 V9GYY5 206 aaPredicted RBP17.69■□□□□ 0.42
PTPN13-204ENST00000436978 ANAPC4Q9UJX5 808 aa17.68■□□□□ 0.42
PTPN13-204ENST00000436978 IRX3P78415 501 aaPredicted RBP17.68■□□□□ 0.42
PTPN13-204ENST00000436978 REXO1Q8N1G1 1221 aaKnown RBP17.68■□□□□ 0.42
PTPN13-204ENST00000436978 TRIM7Q9C029 511 aa17.68■□□□□ 0.42
PTPN13-204ENST00000436978 ZKSCAN5Q9Y2L8 839 aa17.68■□□□□ 0.42
PTPN13-204ENST00000436978 SGSM2O43147 1006 aa17.68■□□□□ 0.42
PTPN13-204ENST00000436978 ERCC5P28715 1186 aaPredicted RBP17.68■□□□□ 0.42
PTPN13-204ENST00000436978 SELENOSQ9BQE4 189 aa17.68■□□□□ 0.42
PTPN13-204ENST00000436978 TRIM35Q9UPQ4 493 aa17.68■□□□□ 0.42
PTPN13-204ENST00000436978 BAG6P46379 1132 aa17.68■□□□□ 0.42
PTPN13-204ENST00000436978 MCM6Q14566 821 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms