RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 SPTY2D1Q68D10 685 aaPredicted RBP18.38■□□□□ 0.53
HDAC8-213ENST00000436675 PROCA1Q8NCQ7 364 aaPredicted RBP18.38■□□□□ 0.53
HDAC8-213ENST00000436675 NBPF3Q9H094 633 aa18.38■□□□□ 0.53
HDAC8-213ENST00000436675 ASCC2Q9H1I8 757 aaPredicted RBP18.38■□□□□ 0.53
HDAC8-213ENST00000436675 FBXO3Q9UK99 471 aa18.38■□□□□ 0.53
HDAC8-213ENST00000436675 GJD2Q9UKL4 321 aa18.38■□□□□ 0.53
HDAC8-213ENST00000436675 ZNF521Q96K83 1311 aa18.38■□□□□ 0.53
HDAC8-213ENST00000436675 PEX10O60683 326 aa18.37■□□□□ 0.53
HDAC8-213ENST00000436675 CYP2B6P20813 491 aa18.37■□□□□ 0.53
HDAC8-213ENST00000436675 MAGEA10P43363 369 aaPredicted RBP18.37■□□□□ 0.53
HDAC8-213ENST00000436675 GCLCP48506 637 aaPredicted RBP18.37■□□□□ 0.53
HDAC8-213ENST00000436675 MNX1P50219 401 aaPredicted RBP18.37■□□□□ 0.53
HDAC8-213ENST00000436675 RHBDL3P58872 404 aa18.37■□□□□ 0.53
HDAC8-213ENST00000436675 RRP1BQ14684 758 aaKnown RBP18.37■□□□□ 0.53
HDAC8-213ENST00000436675 ERICH6Q7L0X2 663 aa18.37■□□□□ 0.53
HDAC8-213ENST00000436675 ANKLE1Q8NAG6 615 aa18.37■□□□□ 0.53
HDAC8-213ENST00000436675 ZNF280CQ8ND82 737 aa18.37■□□□□ 0.53
HDAC8-213ENST00000436675 FAM163AQ96GL9 167 aaPredicted RBP18.37■□□□□ 0.53
HDAC8-213ENST00000436675 C11orf49Q9H6J7 331 aa18.37■□□□□ 0.53
HDAC8-213ENST00000436675 RPTORQ8N122 1335 aa18.37■□□□□ 0.53
HDAC8-213ENST00000436675 GPR75-ASB3A0A0A6YYF3 556 aa18.36■□□□□ 0.53
HDAC8-213ENST00000436675 TBC1D12O60347 775 aa18.36■□□□□ 0.53
HDAC8-213ENST00000436675 ZNF384Q8TF68 577 aa18.36■□□□□ 0.53
HDAC8-213ENST00000436675 TRIB2Q92519 343 aa18.36■□□□□ 0.53
HDAC8-213ENST00000436675 OSBPL5Q9H0X9 879 aaPredicted RBP18.36■□□□□ 0.53
HDAC8-213ENST00000436675 SMC4Q9NTJ3 1288 aa18.36■□□□□ 0.53
HDAC8-213ENST00000436675 PABPC4Q13310 644 aaKnown RBP eCLIP18.35■□□□□ 0.53
HDAC8-213ENST00000436675 XAGE2Q96GT9 111 aa18.35■□□□□ 0.53
HDAC8-213ENST00000436675 A0A1B0GUL7 405 aa18.34■□□□□ 0.53
HDAC8-213ENST00000436675 USP17L5A8MUK1 530 aa18.34■□□□□ 0.53
HDAC8-213ENST00000436675 TFCP2Q12800 502 aa18.34■□□□□ 0.53
HDAC8-213ENST00000436675 PI16Q6UXB8 463 aa18.34■□□□□ 0.53
HDAC8-213ENST00000436675 TBC1D9Q6ZT07 1266 aa18.34■□□□□ 0.53
HDAC8-213ENST00000436675 NEUROD6Q96NK8 337 aa18.34■□□□□ 0.53
HDAC8-213ENST00000436675 UBE2OQ9C0C9 1292 aaKnown RBP18.34■□□□□ 0.53
HDAC8-213ENST00000436675 COPRSQ9NQ92 184 aa18.34■□□□□ 0.53
HDAC8-213ENST00000436675 E9PSI1 815 aa18.33■□□□□ 0.52
HDAC8-213ENST00000436675 PRKAR2AP13861 404 aaKnown RBP18.33■□□□□ 0.52
HDAC8-213ENST00000436675 CAP2P40123 477 aa18.33■□□□□ 0.52
HDAC8-213ENST00000436675 IRX3P78415 501 aaPredicted RBP18.33■□□□□ 0.52
HDAC8-213ENST00000436675 TDHQ8IZJ6 230 aa18.33■□□□□ 0.52
HDAC8-213ENST00000436675 RAI14Q9P0K7 980 aa18.33■□□□□ 0.52
HDAC8-213ENST00000436675 DNAH12Q6ZR08 3092 aa18.33■□□□□ 0.52
HDAC8-213ENST00000436675 PDS5AQ29RF7 1337 aaKnown RBP18.32■□□□□ 0.52
HDAC8-213ENST00000436675 UNC80Q8N2C7 3258 aa18.32■□□□□ 0.52
HDAC8-213ENST00000436675 MTMR2Q13614 643 aa18.32■□□□□ 0.52
HDAC8-213ENST00000436675 TEX11Q8IYF3 940 aa18.32■□□□□ 0.52
HDAC8-213ENST00000436675 P2RX7Q99572 595 aaKnown RBP18.32■□□□□ 0.52
HDAC8-213ENST00000436675 MTMR10Q9NXD2 777 aa18.32■□□□□ 0.52
HDAC8-213ENST00000436675 HMG20BQ9P0W2 317 aa18.32■□□□□ 0.52
HDAC8-213ENST00000436675 OGDHLQ9ULD0 1010 aa18.32■□□□□ 0.52
HDAC8-213ENST00000436675 NOB1Q9ULX3 412 aaKnown RBP18.32■□□□□ 0.52
HDAC8-213ENST00000436675 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.32■□□□□ 0.52
HDAC8-213ENST00000436675 PFASO15067 1338 aa18.31■□□□□ 0.52
HDAC8-213ENST00000436675 LDHCP07864 332 aa18.31■□□□□ 0.52
HDAC8-213ENST00000436675 GSTO1P78417 241 aa18.31■□□□□ 0.52
HDAC8-213ENST00000436675 MVPQ14764 893 aaKnown RBP18.31■□□□□ 0.52
HDAC8-213ENST00000436675 LRIT3Q3SXY7 679 aa18.31■□□□□ 0.52
HDAC8-213ENST00000436675 ALDH1L2Q3SY69 923 aa18.31■□□□□ 0.52
HDAC8-213ENST00000436675 GPR153Q6NV75 609 aa18.31■□□□□ 0.52
HDAC8-213ENST00000436675 MEIS3Q99687 375 aa18.31■□□□□ 0.52
HDAC8-213ENST00000436675 AS3MTQ9HBK9 375 aa18.31■□□□□ 0.52
HDAC8-213ENST00000436675 MORF4L1Q9UBU8 362 aa18.31■□□□□ 0.52
HDAC8-213ENST00000436675 STXBP5LQ9Y2K9 1186 aa18.31■□□□□ 0.52
HDAC8-213ENST00000436675 LAMA2P24043 3122 aaKnown RBP18.31■□□□□ 0.52
HDAC8-213ENST00000436675 SIPA1L1O43166 1804 aa18.3■□□□□ 0.52
HDAC8-213ENST00000436675 NPM3O75607 178 aaKnown RBP18.3■□□□□ 0.52
HDAC8-213ENST00000436675 MDM2Q00987 491 aaPredicted RBP18.3■□□□□ 0.52
HDAC8-213ENST00000436675 SLFN5Q08AF3 891 aa18.3■□□□□ 0.52
HDAC8-213ENST00000436675 SHROOM1Q2M3G4 852 aaPredicted RBP18.3■□□□□ 0.52
HDAC8-213ENST00000436675 SH3D19Q5HYK7 790 aa18.3■□□□□ 0.52
HDAC8-213ENST00000436675 GORABQ5T7V8 394 aa18.3■□□□□ 0.52
HDAC8-213ENST00000436675 SH3RF3Q8TEJ3 882 aaPredicted RBP18.3■□□□□ 0.52
HDAC8-213ENST00000436675 NSUN4Q96CB9 384 aaKnown RBP18.3■□□□□ 0.52
HDAC8-213ENST00000436675 CDCA7LQ96GN5 454 aa18.3■□□□□ 0.52
HDAC8-213ENST00000436675 NUDT12Q9BQG2 462 aa18.3■□□□□ 0.52
HDAC8-213ENST00000436675 TBC1D2Q9BYX2 928 aa18.3■□□□□ 0.52
HDAC8-213ENST00000436675 TXNRD2Q9NNW7 524 aa18.3■□□□□ 0.52
HDAC8-213ENST00000436675 TMOD4Q9NZQ9 345 aa18.3■□□□□ 0.52
HDAC8-213ENST00000436675 AKAP2Q9Y2D5 859 aa18.3■□□□□ 0.52
HDAC8-213ENST00000436675 ZBTB22O15209 634 aa18.29■□□□□ 0.52
HDAC8-213ENST00000436675 JAG1P78504 1218 aa18.29■□□□□ 0.52
HDAC8-213ENST00000436675 CACNB2Q08289 660 aaPredicted RBP18.29■□□□□ 0.52
HDAC8-213ENST00000436675 MAP3K21Q5TCX8 1036 aa18.29■□□□□ 0.52
HDAC8-213ENST00000436675 SPATA5Q8NB90 893 aa18.29■□□□□ 0.52
HDAC8-213ENST00000436675 GPRC5AQ8NFJ5 357 aa18.29■□□□□ 0.52
HDAC8-213ENST00000436675 SRGAP3O43295 1099 aa18.28■□□□□ 0.52
HDAC8-213ENST00000436675 ZKSCAN1P17029 563 aaPredicted RBP18.28■□□□□ 0.52
HDAC8-213ENST00000436675 CCND3P30281 292 aaPredicted RBP18.28■□□□□ 0.52
HDAC8-213ENST00000436675 HERVK_113P62684 666 aa18.28■□□□□ 0.52
HDAC8-213ENST00000436675 CCL14Q16627 93 aa18.28■□□□□ 0.52
HDAC8-213ENST00000436675 LRRC26Q2I0M4 334 aa18.28■□□□□ 0.52
HDAC8-213ENST00000436675 CCAR1Q8IX12 1150 aaKnown RBP18.28■□□□□ 0.52
HDAC8-213ENST00000436675 PAGR1Q9BTK6 254 aa18.28■□□□□ 0.52
HDAC8-213ENST00000436675 HDAC5Q9UQL6 1122 aa18.28■□□□□ 0.52
HDAC8-213ENST00000436675 CDK5RAP2Q96SN8 1893 aa18.28■□□□□ 0.52
HDAC8-213ENST00000436675 COL2A1P02458 1487 aaPredicted RBP18.27■□□□□ 0.52
HDAC8-213ENST00000436675 GDF11O95390 407 aa18.27■□□□□ 0.52
HDAC8-213ENST00000436675 BACE1P56817 501 aa18.27■□□□□ 0.52
HDAC8-213ENST00000436675 PDE3AQ14432 1141 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms