RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 SHC4Q6S5L8 630 aa21.48■■□□□ 1.03
CLK1-205ENST00000434813 ADGRA1Q86SQ6 560 aa21.48■■□□□ 1.03
CLK1-205ENST00000434813 BCL11BQ9C0K0 894 aaPredicted RBP21.48■■□□□ 1.03
CLK1-205ENST00000434813 ZPR1O75312 459 aa21.47■■□□□ 1.03
CLK1-205ENST00000434813 MMP1P03956 469 aa21.47■■□□□ 1.03
CLK1-205ENST00000434813 SYKP43405 635 aa21.47■■□□□ 1.03
CLK1-205ENST00000434813 RBM10P98175 930 aaKnown RBP21.47■■□□□ 1.03
CLK1-205ENST00000434813 RESP18Q5W5W9 173 aa21.47■■□□□ 1.03
CLK1-205ENST00000434813 TRIM22Q8IYM9 498 aa21.47■■□□□ 1.03
CLK1-205ENST00000434813 TOMM22Q9NS69 142 aa21.47■■□□□ 1.03
CLK1-205ENST00000434813 BSDC1Q9NW68 430 aaPredicted RBP21.47■■□□□ 1.03
CLK1-205ENST00000434813 FAM13BQ9NYF5 915 aa21.47■■□□□ 1.03
CLK1-205ENST00000434813 DUOX1Q9NRD9 1551 aa21.47■■□□□ 1.03
CLK1-205ENST00000434813 CCDC196A0A1B0GTZ2 297 aa21.46■■□□□ 1.03
CLK1-205ENST00000434813 C3orf67Q6ZVT6 689 aa21.46■■□□□ 1.03
CLK1-205ENST00000434813 NOSTRINQ8IVI9 506 aa21.46■■□□□ 1.03
CLK1-205ENST00000434813 LRRC8AQ8IWT6 810 aa21.46■■□□□ 1.03
CLK1-205ENST00000434813 MAGEB6P1A0A0J9YX57 407 aa21.46■■□□□ 1.03
CLK1-205ENST00000434813 UBE2Q2LH0YL09 131 aa21.46■■□□□ 1.03
CLK1-205ENST00000434813 CUTAO60888 179 aa21.46■■□□□ 1.03
CLK1-205ENST00000434813 GYG1P46976 350 aa21.46■■□□□ 1.03
CLK1-205ENST00000434813 NBPF11Q86T75 865 aa21.46■■□□□ 1.03
CLK1-205ENST00000434813 FBXW7Q969H0 707 aa21.46■■□□□ 1.03
CLK1-205ENST00000434813 ZKSCAN3Q9BRR0 538 aa21.46■■□□□ 1.03
CLK1-205ENST00000434813 NARFQ9UHQ1 456 aa21.46■■□□□ 1.03
CLK1-205ENST00000434813 MTERF4Q7Z6M4 381 aaKnown RBP21.45■■□□□ 1.02
CLK1-205ENST00000434813 RIOK1Q9BRS2 568 aaKnown RBP21.45■■□□□ 1.02
CLK1-205ENST00000434813 RAI14Q9P0K7 980 aa21.45■■□□□ 1.02
CLK1-205ENST00000434813 ABCF2Q9UG63 623 aa21.45■■□□□ 1.02
CLK1-205ENST00000434813 TUBE1Q9UJT0 475 aa21.45■■□□□ 1.02
CLK1-205ENST00000434813 IQSEC3Q9UPP2 1182 aaPredicted RBP21.45■■□□□ 1.02
CLK1-205ENST00000434813 DEXIO95424 95 aa21.45■■□□□ 1.02
CLK1-205ENST00000434813 SAFBQ15424 915 aaKnown RBP eCLIP21.45■■□□□ 1.02
CLK1-205ENST00000434813 BICDL1Q6ZP65 573 aa21.45■■□□□ 1.02
CLK1-205ENST00000434813 FAM196AQ6ZSG2 479 aa21.45■■□□□ 1.02
CLK1-205ENST00000434813 ZNF654Q8IZM8 581 aa21.45■■□□□ 1.02
CLK1-205ENST00000434813 UBAC1Q9BSL1 405 aa21.45■■□□□ 1.02
CLK1-205ENST00000434813 COL24A1Q17RW2 1714 aa21.44■■□□□ 1.02
CLK1-205ENST00000434813 GTF2E1P29083 439 aaPredicted RBP21.44■■□□□ 1.02
CLK1-205ENST00000434813 GUCY1A2P33402 732 aa21.44■■□□□ 1.02
CLK1-205ENST00000434813 KRT27Q7Z3Y8 459 aa21.44■■□□□ 1.02
CLK1-205ENST00000434813 DIS3L2Q8IYB7 885 aaKnown RBP21.44■■□□□ 1.02
CLK1-205ENST00000434813 SDR42E1Q8WUS8 393 aa21.44■■□□□ 1.02
CLK1-205ENST00000434813 ESR2Q92731 530 aa21.44■■□□□ 1.02
CLK1-205ENST00000434813 FOXP1Q9H334 677 aaPredicted RBP21.44■■□□□ 1.02
CLK1-205ENST00000434813 TAF1P21675 1872 aa21.44■■□□□ 1.02
CLK1-205ENST00000434813 SBF2Q86WG5 1849 aa21.44■■□□□ 1.02
CLK1-205ENST00000434813 CAVIN4Q5BKX8 364 aa21.43■■□□□ 1.02
CLK1-205ENST00000434813 SMIM5Q71RC9 77 aa21.43■■□□□ 1.02
CLK1-205ENST00000434813 CRACR2BQ8N4Y2 399 aaPredicted RBP21.43■■□□□ 1.02
CLK1-205ENST00000434813 BIN1O00499 593 aa21.43■■□□□ 1.02
CLK1-205ENST00000434813 TPM4P67936 248 aa21.43■■□□□ 1.02
CLK1-205ENST00000434813 PPP2R5BQ15173 497 aa21.43■■□□□ 1.02
CLK1-205ENST00000434813 SEC23AQ15436 765 aa21.43■■□□□ 1.02
CLK1-205ENST00000434813 FANCBQ8NB91 859 aa21.43■■□□□ 1.02
CLK1-205ENST00000434813 SETDB2Q96T68 719 aa21.43■■□□□ 1.02
CLK1-205ENST00000434813 MINPP1Q9UNW1 487 aa21.43■■□□□ 1.02
CLK1-205ENST00000434813 TNKSO95271 1327 aa21.42■■□□□ 1.02
CLK1-205ENST00000434813 SMTNL1A8MU46 457 aa21.42■■□□□ 1.02
CLK1-205ENST00000434813 IKBKBO14920 756 aa21.42■■□□□ 1.02
CLK1-205ENST00000434813 GSDMDP57764 484 aa21.42■■□□□ 1.02
CLK1-205ENST00000434813 NCAPHQ15003 741 aa21.42■■□□□ 1.02
CLK1-205ENST00000434813 SLC10A5Q5PT55 438 aa21.42■■□□□ 1.02
CLK1-205ENST00000434813 TBC1D9BQ66K14 1250 aa21.42■■□□□ 1.02
CLK1-205ENST00000434813 BRIP1Q9BX63 1249 aa21.42■■□□□ 1.02
CLK1-205ENST00000434813 NYXQ9GZU5 481 aa21.42■■□□□ 1.02
CLK1-205ENST00000434813 TAOK2Q9UL54 1235 aa21.42■■□□□ 1.02
CLK1-205ENST00000434813 DLEC1Q9Y238 1755 aa21.42■■□□□ 1.02
CLK1-205ENST00000434813 LY75O60449 1722 aa21.42■■□□□ 1.02
CLK1-205ENST00000434813 BTBD18B2RXH4 712 aa21.41■■□□□ 1.02
CLK1-205ENST00000434813 SEMA3EO15041 775 aa21.41■■□□□ 1.02
CLK1-205ENST00000434813 RILPL1Q5EBL4 403 aa21.41■■□□□ 1.02
CLK1-205ENST00000434813 KRI1Q8N9T8 703 aaKnown RBP21.41■■□□□ 1.02
CLK1-205ENST00000434813 CLIC6Q96NY7 704 aa21.41■■□□□ 1.02
CLK1-205ENST00000434813 OSBPL5Q9H0X9 879 aaPredicted RBP21.41■■□□□ 1.02
CLK1-205ENST00000434813 IMPACTQ9P2X3 320 aa21.41■■□□□ 1.02
CLK1-205ENST00000434813 SRP68Q9UHB9 627 aaKnown RBP21.41■■□□□ 1.02
CLK1-205ENST00000434813 EP400Q96L91 3159 aa21.41■■□□□ 1.02
CLK1-205ENST00000434813 MINDY4BA8MYZ0 360 aa21.41■■□□□ 1.02
CLK1-205ENST00000434813 FILIP1Q7Z7B0 1213 aa21.41■■□□□ 1.02
CLK1-205ENST00000434813 BCL2L12Q9HB09 334 aa21.41■■□□□ 1.02
CLK1-205ENST00000434813 MAST2Q6P0Q8 1798 aa21.41■■□□□ 1.02
CLK1-205ENST00000434813 PDS5AQ29RF7 1337 aaKnown RBP21.41■■□□□ 1.02
CLK1-205ENST00000434813 MYH13Q9UKX3 1938 aa21.4■■□□□ 1.02
CLK1-205ENST00000434813 RFC4P35249 363 aa21.4■■□□□ 1.02
CLK1-205ENST00000434813 TOB1P50616 345 aaPredicted RBP21.4■■□□□ 1.02
CLK1-205ENST00000434813 CCZ1BP86790 482 aa21.4■■□□□ 1.02
CLK1-205ENST00000434813 CCZ1P86791 482 aaPredicted RBP21.4■■□□□ 1.02
CLK1-205ENST00000434813 ARID5BQ14865 1188 aa21.4■■□□□ 1.02
CLK1-205ENST00000434813 ELOA2Q8IYF1 753 aaPredicted RBP21.4■■□□□ 1.02
CLK1-205ENST00000434813 STK11IPQ8N1F8 1099 aa21.4■■□□□ 1.02
CLK1-205ENST00000434813 ARHGEF1Q92888 912 aaKnown RBP21.4■■□□□ 1.02
CLK1-205ENST00000434813 FAM84BQ96KN1 310 aaPredicted RBP21.4■■□□□ 1.02
CLK1-205ENST00000434813 RNF26Q9BY78 433 aaPredicted RBP21.4■■□□□ 1.02
CLK1-205ENST00000434813 KCNJ14Q9UNX9 436 aa21.4■■□□□ 1.02
CLK1-205ENST00000434813 RIOK3O14730 519 aaKnown RBP21.39■■□□□ 1.02
CLK1-205ENST00000434813 PCP11498 1178 aaKnown RBP21.39■■□□□ 1.02
CLK1-205ENST00000434813 TRAPPC3LQ5T215 181 aa21.39■■□□□ 1.02
CLK1-205ENST00000434813 NUP133Q8WUM0 1156 aa21.39■■□□□ 1.02
CLK1-205ENST00000434813 CELF1Q92879 486 aaKnown RBP21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms