RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 C12orf60Q5U649 245 aa22.05■■□□□ 1.12
RFTN1-202ENST00000431547 CTR9Q6PD62 1173 aa22.05■■□□□ 1.12
RFTN1-202ENST00000431547 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.05■■□□□ 1.12
RFTN1-202ENST00000431547 AMOTL1Q8IY63 956 aa22.05■■□□□ 1.12
RFTN1-202ENST00000431547 WRNIP1Q96S55 665 aa22.05■■□□□ 1.12
RFTN1-202ENST00000431547 EPB41L4AQ9HCS5 686 aaPredicted RBP22.05■■□□□ 1.12
RFTN1-202ENST00000431547 ARPP21Q9UBL0 812 aaPredicted RBP22.05■■□□□ 1.12
RFTN1-202ENST00000431547 SERPINB13Q9UIV8 391 aa22.05■■□□□ 1.12
RFTN1-202ENST00000431547 TAOK2Q9UL54 1235 aa22.05■■□□□ 1.12
RFTN1-202ENST00000431547 FOXP2O15409 715 aa22.04■■□□□ 1.12
RFTN1-202ENST00000431547 SLURP2P0DP57 97 aa22.04■■□□□ 1.12
RFTN1-202ENST00000431547 SLC4A8Q2Y0W8 1093 aa22.04■■□□□ 1.12
RFTN1-202ENST00000431547 VPS53Q5VIR6 699 aa22.04■■□□□ 1.12
RFTN1-202ENST00000431547 RGMBQ6NW40 437 aa22.04■■□□□ 1.12
RFTN1-202ENST00000431547 CRACR2BQ8N4Y2 399 aaPredicted RBP22.04■■□□□ 1.12
RFTN1-202ENST00000431547 GTF3C3Q9Y5Q9 886 aa22.04■■□□□ 1.12
RFTN1-202ENST00000431547 RAD50Q92878 1312 aa22.04■■□□□ 1.12
RFTN1-202ENST00000431547 CYP2D6P10635 497 aa22.03■■□□□ 1.12
RFTN1-202ENST00000431547 HSPD1P10809 573 aaKnown RBP22.03■■□□□ 1.12
RFTN1-202ENST00000431547 TDO2P48775 406 aa22.03■■□□□ 1.12
RFTN1-202ENST00000431547 GABPAQ06546 454 aa22.03■■□□□ 1.12
RFTN1-202ENST00000431547 ALX1Q15699 326 aa22.03■■□□□ 1.12
RFTN1-202ENST00000431547 TRIM34Q9BYJ4 488 aa22.03■■□□□ 1.12
RFTN1-202ENST00000431547 DNAJC18Q9H819 358 aa22.03■■□□□ 1.12
RFTN1-202ENST00000431547 FOCADQ5VW36 1801 aa22.02■■□□□ 1.12
RFTN1-202ENST00000431547 FAM196BA6NMK8 535 aa22.02■■□□□ 1.12
RFTN1-202ENST00000431547 ZNF157P51786 506 aaPredicted RBP22.02■■□□□ 1.12
RFTN1-202ENST00000431547 CCDC102AQ96A19 550 aa22.02■■□□□ 1.12
RFTN1-202ENST00000431547 SLC10A4Q96EP9 437 aa22.02■■□□□ 1.12
RFTN1-202ENST00000431547 CLMNQ96JQ2 1002 aa22.02■■□□□ 1.12
RFTN1-202ENST00000431547 NAPBQ9H115 298 aa22.02■■□□□ 1.12
RFTN1-202ENST00000431547 CSADQ9Y600 493 aa22.02■■□□□ 1.12
RFTN1-202ENST00000431547 CYP2D7A0A087X1C5 515 aa22.01■■□□□ 1.11
RFTN1-202ENST00000431547 SGSM2O43147 1006 aa22.01■■□□□ 1.11
RFTN1-202ENST00000431547 CTNND1O60716 968 aaKnown RBP22.01■■□□□ 1.11
RFTN1-202ENST00000431547 INPP5BP32019 993 aa22.01■■□□□ 1.11
RFTN1-202ENST00000431547 VGLL4Q14135 290 aa22.01■■□□□ 1.11
RFTN1-202ENST00000431547 DNAJC5GQ8N7S2 189 aa22.01■■□□□ 1.11
RFTN1-202ENST00000431547 ZKSCAN4Q969J2 545 aaPredicted RBP22.01■■□□□ 1.11
RFTN1-202ENST00000431547 IL25Q9H293 177 aa22.01■■□□□ 1.11
RFTN1-202ENST00000431547 CDK5RAP2Q96SN8 1893 aa22■■□□□ 1.11
RFTN1-202ENST00000431547 CDC45O75419 566 aa22■■□□□ 1.11
RFTN1-202ENST00000431547 ECE1P42892 770 aa22■■□□□ 1.11
RFTN1-202ENST00000431547 EVX2Q03828 476 aa22■■□□□ 1.11
RFTN1-202ENST00000431547 NOL9Q5SY16 702 aaKnown RBP22■■□□□ 1.11
RFTN1-202ENST00000431547 TATDN1Q6P1N9 297 aa22■■□□□ 1.11
RFTN1-202ENST00000431547 MINDY4BA8MYZ0 360 aa21.99■■□□□ 1.11
RFTN1-202ENST00000431547 FGAP02671 866 aa21.99■■□□□ 1.11
RFTN1-202ENST00000431547 CYP4F22Q6NT55 531 aa21.99■■□□□ 1.11
RFTN1-202ENST00000431547 CAPNS2Q96L46 248 aa21.99■■□□□ 1.11
RFTN1-202ENST00000431547 DSCC1Q9BVC3 393 aa21.99■■□□□ 1.11
RFTN1-202ENST00000431547 SWAP70Q9UH65 585 aa21.99■■□□□ 1.11
RFTN1-202ENST00000431547 SNCAIPQ9Y6H5 919 aa21.99■■□□□ 1.11
RFTN1-202ENST00000431547 DDX60LQ5H9U9 1706 aaKnown RBP21.99■■□□□ 1.11
RFTN1-202ENST00000431547 ZMYM6O95789 1325 aa21.99■■□□□ 1.11
RFTN1-202ENST00000431547 FAM155AB1AL88 458 aaPredicted RBP21.98■■□□□ 1.11
RFTN1-202ENST00000431547 SMIM22K7EJ46 135 aa21.98■■□□□ 1.11
RFTN1-202ENST00000431547 SLC10A3P09131 477 aa21.98■■□□□ 1.11
RFTN1-202ENST00000431547 SHMT1P34896 483 aa21.98■■□□□ 1.11
RFTN1-202ENST00000431547 CAP2P40123 477 aa21.98■■□□□ 1.11
RFTN1-202ENST00000431547 VEGFBP49765 207 aa21.98■■□□□ 1.11
RFTN1-202ENST00000431547 RRP1BQ14684 758 aaKnown RBP21.98■■□□□ 1.11
RFTN1-202ENST00000431547 CASC1Q6TDU7 716 aa21.98■■□□□ 1.11
RFTN1-202ENST00000431547 PAXIP1Q6ZW49 1069 aaPredicted RBP21.98■■□□□ 1.11
RFTN1-202ENST00000431547 RASAL3Q86YV0 1011 aa21.98■■□□□ 1.11
RFTN1-202ENST00000431547 SCYL3Q8IZE3 742 aa21.98■■□□□ 1.11
RFTN1-202ENST00000431547 DYNLL2Q96FJ2 89 aa21.98■■□□□ 1.11
RFTN1-202ENST00000431547 ELP3Q9H9T3 547 aa21.98■■□□□ 1.11
RFTN1-202ENST00000431547 C16orf86Q6ZW13 317 aa21.97■■□□□ 1.11
RFTN1-202ENST00000431547 ESYT1Q9BSJ8 1104 aa21.97■■□□□ 1.11
RFTN1-202ENST00000431547 GINM1Q9NU53 330 aa21.97■■□□□ 1.11
RFTN1-202ENST00000431547 WDR33Q9C0J8 1336 aaKnown RBP21.97■■□□□ 1.11
RFTN1-202ENST00000431547 SPDYE5A6NIY4 337 aa21.96■■□□□ 1.11
RFTN1-202ENST00000431547 CDK8P49336 464 aa21.96■■□□□ 1.11
RFTN1-202ENST00000431547 PPARAQ07869 468 aa21.96■■□□□ 1.11
RFTN1-202ENST00000431547 SPRYD7Q5W111 196 aa21.96■■□□□ 1.11
RFTN1-202ENST00000431547 ERO1BQ86YB8 467 aa21.96■■□□□ 1.11
RFTN1-202ENST00000431547 PICK1Q9NRD5 415 aa21.96■■□□□ 1.11
RFTN1-202ENST00000431547 ANAPC4Q9UJX5 808 aa21.96■■□□□ 1.11
RFTN1-202ENST00000431547 ROBO3Q96MS0 1386 aa21.96■■□□□ 1.11
RFTN1-202ENST00000431547 NAV1Q8NEY1 1877 aa21.96■■□□□ 1.11
RFTN1-202ENST00000431547 AK9Q5TCS8 1911 aa21.96■■□□□ 1.11
RFTN1-202ENST00000431547 ZBTB48P10074 688 aaPredicted RBP21.95■■□□□ 1.1
RFTN1-202ENST00000431547 NOGQ13253 232 aa21.95■■□□□ 1.1
RFTN1-202ENST00000431547 CERKLQ49MI3 558 aaPredicted RBP21.95■■□□□ 1.1
RFTN1-202ENST00000431547 SLC44A5Q8NCS7 719 aa21.95■■□□□ 1.1
RFTN1-202ENST00000431547 OPTNQ96CV9 577 aa21.95■■□□□ 1.1
RFTN1-202ENST00000431547 WNK4Q96J92 1243 aa21.95■■□□□ 1.1
RFTN1-202ENST00000431547 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.95■■□□□ 1.1
RFTN1-202ENST00000431547 SIPA1L1O43166 1804 aa21.94■■□□□ 1.1
RFTN1-202ENST00000431547 SLC3A2P08195 630 aaKnown RBP21.94■■□□□ 1.1
RFTN1-202ENST00000431547 PPATQ06203 517 aa21.94■■□□□ 1.1
RFTN1-202ENST00000431547 GRM1Q13255 1194 aa21.94■■□□□ 1.1
RFTN1-202ENST00000431547 ZNF287Q9HBT7 754 aa21.94■■□□□ 1.1
RFTN1-202ENST00000431547 CTNNA3Q9UI47 895 aa21.94■■□□□ 1.1
RFTN1-202ENST00000431547 MYH1P12882 1939 aa21.94■■□□□ 1.1
RFTN1-202ENST00000431547 ASNSP08243 561 aa21.93■■□□□ 1.1
RFTN1-202ENST00000431547 PTPRAP18433 802 aa21.93■■□□□ 1.1
RFTN1-202ENST00000431547 MAP2K2P36507 400 aa21.93■■□□□ 1.1
RFTN1-202ENST00000431547 JAG1P78504 1218 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms