RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 SDR42E1Q8WUS8 393 aa14.76□□□□□ -0.05
SPG11-202ENST00000427534 SUCLG2Q96I99 432 aa14.76□□□□□ -0.05
SPG11-202ENST00000427534 TIGD1Q96MW7 591 aa14.76□□□□□ -0.05
SPG11-202ENST00000427534 TTC12Q9H892 705 aaPredicted RBP14.76□□□□□ -0.05
SPG11-202ENST00000427534 IFT74Q96LB3 600 aa14.76□□□□□ -0.05
SPG11-202ENST00000427534 CCDC42Q96M95 316 aa14.76□□□□□ -0.05
SPG11-202ENST00000427534 M0QZ92 97 aa14.76□□□□□ -0.05
SPG11-202ENST00000427534 PDE8AO60658 829 aa14.76□□□□□ -0.05
SPG11-202ENST00000427534 RASAL2Q9UJF2 1139 aa14.76□□□□□ -0.05
SPG11-202ENST00000427534 PZPP20742 1482 aa14.76□□□□□ -0.05
SPG11-202ENST00000427534 COL17A1Q9UMD9 1497 aaPredicted RBP14.76□□□□□ -0.05
SPG11-202ENST00000427534 GTF3C6Q969F1 213 aa14.76□□□□□ -0.05
SPG11-202ENST00000427534 EPB41P11171 864 aaKnown RBP14.76□□□□□ -0.05
SPG11-202ENST00000427534 KCNA4P22459 653 aa14.76□□□□□ -0.05
SPG11-202ENST00000427534 TNNI3KQ59H18 835 aa14.76□□□□□ -0.05
SPG11-202ENST00000427534 TTC30BQ8N4P2 665 aa14.76□□□□□ -0.05
SPG11-202ENST00000427534 ATRIPQ8WXE1 791 aa14.76□□□□□ -0.05
SPG11-202ENST00000427534 FPGT-TNNI3KV9GXZ4 949 aa14.76□□□□□ -0.05
SPG11-202ENST00000427534 ARHGEF16Q5VV41 709 aa14.75□□□□□ -0.05
SPG11-202ENST00000427534 TRPM2O94759 1503 aa14.75□□□□□ -0.05
SPG11-202ENST00000427534 GPAA1O43292 621 aa14.75□□□□□ -0.05
SPG11-202ENST00000427534 TTC30AQ86WT1 665 aa14.75□□□□□ -0.05
SPG11-202ENST00000427534 NOC4LQ9BVI4 516 aaKnown RBP14.75□□□□□ -0.05
SPG11-202ENST00000427534 CSADQ9Y600 493 aa14.75□□□□□ -0.05
SPG11-202ENST00000427534 MCM3P25205 808 aa14.75□□□□□ -0.05
SPG11-202ENST00000427534 ARHGAP44Q17R89 818 aa14.75□□□□□ -0.05
SPG11-202ENST00000427534 IP6K1Q92551 441 aa14.75□□□□□ -0.05
SPG11-202ENST00000427534 SOS1Q07889 1333 aaPredicted RBP14.75□□□□□ -0.05
SPG11-202ENST00000427534 ZMYM3Q14202 1370 aa14.75□□□□□ -0.05
SPG11-202ENST00000427534 ZEB2O60315 1214 aa14.75□□□□□ -0.05
SPG11-202ENST00000427534 MAGED2Q9UNF1 606 aaPredicted RBP14.75□□□□□ -0.05
SPG11-202ENST00000427534 SPDYE16A6NNV3 312 aaPredicted RBP14.75□□□□□ -0.05
SPG11-202ENST00000427534 TPD52P55327 224 aaPredicted RBP14.75□□□□□ -0.05
SPG11-202ENST00000427534 SPDYE2Q495Y8 402 aa14.75□□□□□ -0.05
SPG11-202ENST00000427534 SREK1Q8WXA9 508 aaKnown RBP14.75□□□□□ -0.05
SPG11-202ENST00000427534 ZNF532Q9HCE3 1301 aa14.75□□□□□ -0.05
SPG11-202ENST00000427534 SPOPO43791 374 aa14.74□□□□□ -0.05
SPG11-202ENST00000427534 STX10O60499 249 aa14.74□□□□□ -0.05
SPG11-202ENST00000427534 GPR101Q96P66 508 aaPredicted RBP14.74□□□□□ -0.05
SPG11-202ENST00000427534 NKX1-1Q15270 411 aaPredicted RBP14.74□□□□□ -0.05
SPG11-202ENST00000427534 MAP7D1Q3KQU3 841 aa14.74□□□□□ -0.05
SPG11-202ENST00000427534 BRDTQ58F21 947 aaPredicted RBP14.74□□□□□ -0.05
SPG11-202ENST00000427534 CFAP43Q8NDM7 1665 aa14.74□□□□□ -0.05
SPG11-202ENST00000427534 ZHX1Q9UKY1 873 aaPredicted RBP14.74□□□□□ -0.05
SPG11-202ENST00000427534 SH3TC1Q8TE82 1336 aa14.74□□□□□ -0.05
SPG11-202ENST00000427534 CD19P15391 556 aa14.74□□□□□ -0.05
SPG11-202ENST00000427534 TSTA3Q13630 321 aaPredicted RBP14.74□□□□□ -0.05
SPG11-202ENST00000427534 MLXIPQ9HAP2 919 aa14.74□□□□□ -0.05
SPG11-202ENST00000427534 ZBTB7BO15156 539 aaPredicted RBP14.74□□□□□ -0.05
SPG11-202ENST00000427534 PRPF6O94906 941 aaKnown RBP14.74□□□□□ -0.05
SPG11-202ENST00000427534 BMP15O95972 392 aa14.74□□□□□ -0.05
SPG11-202ENST00000427534 SMTNP53814 917 aa14.74□□□□□ -0.05
SPG11-202ENST00000427534 SPATA5Q8NB90 893 aa14.74□□□□□ -0.05
SPG11-202ENST00000427534 GOLGA1Q92805 767 aa14.74□□□□□ -0.05
SPG11-202ENST00000427534 SUGCTQ9HAC7 445 aa14.74□□□□□ -0.05
SPG11-202ENST00000427534 ST7Q9NRC1 585 aa14.74□□□□□ -0.05
SPG11-202ENST00000427534 ABT1Q9ULW3 272 aaKnown RBP14.74□□□□□ -0.05
SPG11-202ENST00000427534 POLR2DO15514 142 aaKnown RBP14.73□□□□□ -0.05
SPG11-202ENST00000427534 CFAP157Q5JU67 520 aa14.73□□□□□ -0.05
SPG11-202ENST00000427534 DCPSQ96C86 337 aaKnown RBP14.73□□□□□ -0.05
SPG11-202ENST00000427534 SH2D4AQ9H788 454 aa14.73□□□□□ -0.05
SPG11-202ENST00000427534 VPS54Q9P1Q0 977 aa14.73□□□□□ -0.05
SPG11-202ENST00000427534 CHMLP26374 656 aa14.73□□□□□ -0.05
SPG11-202ENST00000427534 MFSD14BQ5SR56 506 aa14.73□□□□□ -0.05
SPG11-202ENST00000427534 CASC4Q6P4E1 433 aa14.73□□□□□ -0.05
SPG11-202ENST00000427534 TACC1O75410 805 aa14.73□□□□□ -0.05
SPG11-202ENST00000427534 EEPD1Q7L9B9 569 aa14.73□□□□□ -0.05
SPG11-202ENST00000427534 CTAGE1Q96RT6 745 aa14.73□□□□□ -0.05
SPG11-202ENST00000427534 BCAMP50895 628 aa14.73□□□□□ -0.05
SPG11-202ENST00000427534 MRPL44Q9H9J2 332 aaKnown RBP14.73□□□□□ -0.05
SPG11-202ENST00000427534 PLBD2Q8NHP8 589 aa14.73□□□□□ -0.05
SPG11-202ENST00000427534 SEPT10Q9P0V9 454 aa14.73□□□□□ -0.05
SPG11-202ENST00000427534 ITKQ08881 620 aa14.73□□□□□ -0.05
SPG11-202ENST00000427534 DPY19L2Q6NUT2 758 aa14.73□□□□□ -0.05
SPG11-202ENST00000427534 MMS19Q96T76 1030 aa14.73□□□□□ -0.05
SPG11-202ENST00000427534 CGNQ9P2M7 1197 aaKnown RBP14.73□□□□□ -0.05
SPG11-202ENST00000427534 CTAGE15A4D2H0 777 aa14.72□□□□□ -0.05
SPG11-202ENST00000427534 CTAGE8P0CG41 777 aa14.72□□□□□ -0.05
SPG11-202ENST00000427534 TNFAIP3P21580 790 aa14.72□□□□□ -0.05
SPG11-202ENST00000427534 KIF5AQ12840 1032 aa14.72□□□□□ -0.05
SPG11-202ENST00000427534 CTAGE6Q86UF2 777 aa14.72□□□□□ -0.05
SPG11-202ENST00000427534 CTAGE4Q8IX94 777 aa14.72□□□□□ -0.05
SPG11-202ENST00000427534 BBXQ8WY36 941 aaPredicted RBP14.72□□□□□ -0.05
SPG11-202ENST00000427534 PLVAPQ9BX97 442 aa14.72□□□□□ -0.05
SPG11-202ENST00000427534 IL13P35225 146 aa14.72□□□□□ -0.05
SPG11-202ENST00000427534 BMS1Q14692 1282 aaKnown RBP14.72□□□□□ -0.05
SPG11-202ENST00000427534 DHX32Q7L7V1 743 aaKnown RBP14.72□□□□□ -0.05
SPG11-202ENST00000427534 CCT6BQ92526 530 aa14.72□□□□□ -0.05
SPG11-202ENST00000427534 DBNDD1Q9H9R9 158 aa14.72□□□□□ -0.05
SPG11-202ENST00000427534 SLAIN2Q9P270 581 aa14.72□□□□□ -0.05
SPG11-202ENST00000427534 EIF4G3O43432 1585 aaKnown RBP14.72□□□□□ -0.05
SPG11-202ENST00000427534 ARPP19P56211 112 aa14.72□□□□□ -0.05
SPG11-202ENST00000427534 UHRF1BP1Q6BDS2 1440 aa14.72□□□□□ -0.05
SPG11-202ENST00000427534 GOLGA6L9A6NEM1 432 aa14.72□□□□□ -0.05
SPG11-202ENST00000427534 TFAP4Q01664 338 aa14.72□□□□□ -0.05
SPG11-202ENST00000427534 SNX29Q8TEQ0 813 aa14.72□□□□□ -0.05
SPG11-202ENST00000427534 SLC52A2Q9HAB3 445 aa14.72□□□□□ -0.05
SPG11-202ENST00000427534 RBM28Q9NW13 759 aaKnown RBP14.72□□□□□ -0.05
SPG11-202ENST00000427534 CTAGE9A4FU28 777 aa14.72□□□□□ -0.05
SPG11-202ENST00000427534 IGSF3O75054 1194 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms