RNA–Protein interactions for RNA: ENST00000421069.5

VPS8-202, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-202ENST00000421069 CEP41Q9BYV8 373 aa7.17□□□□□ -1.26
VPS8-202ENST00000421069 ZNF408Q9H9D4 720 aa7.17□□□□□ -1.26
VPS8-202ENST00000421069 USP21Q9UK80 565 aa7.17□□□□□ -1.26
VPS8-202ENST00000421069 CSADQ9Y600 493 aa7.17□□□□□ -1.26
VPS8-202ENST00000421069 PRAMEF27A3QJZ7 478 aa7.16□□□□□ -1.26
VPS8-202ENST00000421069 MEIS3P2A8K0S8 358 aa7.16□□□□□ -1.26
VPS8-202ENST00000421069 PLCG1P19174 1290 aa7.16□□□□□ -1.26
VPS8-202ENST00000421069 ETFBP38117 255 aa7.16□□□□□ -1.26
VPS8-202ENST00000421069 TNNI3KQ59H18 835 aa7.16□□□□□ -1.26
VPS8-202ENST00000421069 PPM1JQ5JR12 505 aa7.16□□□□□ -1.26
VPS8-202ENST00000421069 NBPF6Q5VWK0 638 aa7.16□□□□□ -1.26
VPS8-202ENST00000421069 CCDC81Q6ZN84 652 aa7.16□□□□□ -1.26
VPS8-202ENST00000421069 CKAP2LQ8IYA6 745 aa7.16□□□□□ -1.26
VPS8-202ENST00000421069 ZNF507Q8TCN5 953 aa7.16□□□□□ -1.26
VPS8-202ENST00000421069 NBPF4Q96M43 638 aa7.16□□□□□ -1.26
VPS8-202ENST00000421069 REV1Q9UBZ9 1251 aa7.16□□□□□ -1.26
VPS8-202ENST00000421069 PRKAG3Q9UGI9 489 aa7.16□□□□□ -1.26
VPS8-202ENST00000421069 AP4E1Q9UPM8 1137 aa7.16□□□□□ -1.26
VPS8-202ENST00000421069 CORINQ9Y5Q5 1042 aa7.16□□□□□ -1.26
VPS8-202ENST00000421069 PGRP06401 933 aa7.15□□□□□ -1.26
VPS8-202ENST00000421069 DRD2P14416 443 aa7.15□□□□□ -1.26
VPS8-202ENST00000421069 GRK4P32298 578 aa7.15□□□□□ -1.26
VPS8-202ENST00000421069 ETF1P62495 437 aaKnown RBP7.15□□□□□ -1.26
VPS8-202ENST00000421069 ADGRE1Q14246 886 aa7.15□□□□□ -1.26
VPS8-202ENST00000421069 FBXW10Q5XX13 1052 aa7.15□□□□□ -1.26
VPS8-202ENST00000421069 DYMQ7RTS9 669 aa7.15□□□□□ -1.26
VPS8-202ENST00000421069 AGGF1Q8N302 714 aaeCLIP7.15□□□□□ -1.26
VPS8-202ENST00000421069 KCT2Q8NC54 265 aa7.15□□□□□ -1.26
VPS8-202ENST00000421069 C2CD4AQ8NCU7 369 aaPredicted RBP7.15□□□□□ -1.26
VPS8-202ENST00000421069 WFDC12Q8WWY7 111 aa7.15□□□□□ -1.26
VPS8-202ENST00000421069 ANAPC16Q96DE5 110 aa7.15□□□□□ -1.26
VPS8-202ENST00000421069 DNAJC2Q99543 621 aaKnown RBP7.15□□□□□ -1.26
VPS8-202ENST00000421069 PICK1Q9NRD5 415 aa7.15□□□□□ -1.26
VPS8-202ENST00000421069 GMIPQ9P107 970 aa7.15□□□□□ -1.26
VPS8-202ENST00000421069 MRVI1Q9Y6F6 885 aa7.15□□□□□ -1.26
VPS8-202ENST00000421069 ALX3O95076 343 aa7.14□□□□□ -1.27
VPS8-202ENST00000421069 NOS3P29474 1203 aa7.14□□□□□ -1.27
VPS8-202ENST00000421069 NTF4P34130 210 aa7.14□□□□□ -1.27
VPS8-202ENST00000421069 ASPAP45381 313 aa7.14□□□□□ -1.27
VPS8-202ENST00000421069 HID1Q8IV36 788 aa7.14□□□□□ -1.27
VPS8-202ENST00000421069 TMEM40Q8WWA1 233 aa7.14□□□□□ -1.27
VPS8-202ENST00000421069 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.13□□□□□ -1.27
VPS8-202ENST00000421069 SART1O43290 800 aaKnown RBP7.13□□□□□ -1.27
VPS8-202ENST00000421069 CAP2P40123 477 aa7.13□□□□□ -1.27
VPS8-202ENST00000421069 CASP7P55210 303 aa7.13□□□□□ -1.27
VPS8-202ENST00000421069 TTLL4Q14679 1199 aa7.13□□□□□ -1.27
VPS8-202ENST00000421069 MBTPS1Q14703 1052 aa7.13□□□□□ -1.27
VPS8-202ENST00000421069 LSRQ86X29 649 aaPredicted RBP7.13□□□□□ -1.27
VPS8-202ENST00000421069 MCATQ8IVS2 390 aaKnown RBP7.13□□□□□ -1.27
VPS8-202ENST00000421069 TAB3Q8N5C8 712 aaPredicted RBP7.13□□□□□ -1.27
VPS8-202ENST00000421069 C19orf47Q8N9M1 422 aaKnown RBP7.13□□□□□ -1.27
VPS8-202ENST00000421069 FAM46AQ96IP4 442 aaKnown RBP7.13□□□□□ -1.27
VPS8-202ENST00000421069 TM9SF2Q99805 663 aa7.13□□□□□ -1.27
VPS8-202ENST00000421069 PIDD1Q9HB75 910 aa7.13□□□□□ -1.27
VPS8-202ENST00000421069 ACTL7BQ9Y614 415 aa7.13□□□□□ -1.27
VPS8-202ENST00000421069 SLC22A31A6NKX4 558 aa7.12□□□□□ -1.27
VPS8-202ENST00000421069 RNF225M0QZC1 329 aaPredicted RBP7.12□□□□□ -1.27
VPS8-202ENST00000421069 KLF4O43474 513 aa7.12□□□□□ -1.27
VPS8-202ENST00000421069 NEFMP07197 916 aa7.12□□□□□ -1.27
VPS8-202ENST00000421069 GLB1P16278 677 aa7.12□□□□□ -1.27
VPS8-202ENST00000421069 PREPP48147 710 aa7.12□□□□□ -1.27
VPS8-202ENST00000421069 IREB2P48200 963 aaKnown RBP7.12□□□□□ -1.27
VPS8-202ENST00000421069 UVSSAQ2YD98 709 aa7.12□□□□□ -1.27
VPS8-202ENST00000421069 CDCP2Q5VXM1 449 aa7.12□□□□□ -1.27
VPS8-202ENST00000421069 INTS3Q68E01 1043 aaKnown RBP7.12□□□□□ -1.27
VPS8-202ENST00000421069 SLC6A19Q695T7 634 aa7.12□□□□□ -1.27
VPS8-202ENST00000421069 ANKS3Q6ZW76 656 aa7.12□□□□□ -1.27
VPS8-202ENST00000421069 CDC37L1Q7L3B6 337 aa7.12□□□□□ -1.27
VPS8-202ENST00000421069 TXNRD3Q86VQ6 643 aa7.12□□□□□ -1.27
VPS8-202ENST00000421069 MRPL41Q8IXM3 137 aaKnown RBP7.12□□□□□ -1.27
VPS8-202ENST00000421069 FAM169BQ8N8A8 192 aa7.12□□□□□ -1.27
VPS8-202ENST00000421069 ACSF2Q96CM8 615 aaPredicted RBP7.12□□□□□ -1.27
VPS8-202ENST00000421069 LNPKQ9C0E8 428 aa7.12□□□□□ -1.27
VPS8-202ENST00000421069 FAM105AQ9NUU6 356 aa7.12□□□□□ -1.27
VPS8-202ENST00000421069 TJP2Q9UDY2 1190 aa7.12□□□□□ -1.27
VPS8-202ENST00000421069 SMAD7O15105 426 aaKnown RBP7.11□□□□□ -1.27
VPS8-202ENST00000421069 YARSP54577 528 aaKnown RBP7.11□□□□□ -1.27
VPS8-202ENST00000421069 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.11□□□□□ -1.27
VPS8-202ENST00000421069 DPH6Q7L8W6 267 aa7.11□□□□□ -1.27
VPS8-202ENST00000421069 SMYD4Q8IYR2 804 aaPredicted RBP7.11□□□□□ -1.27
VPS8-202ENST00000421069 DZIP1LQ8IYY4 767 aaKnown RBP7.11□□□□□ -1.27
VPS8-202ENST00000421069 ISL2Q96A47 359 aa7.11□□□□□ -1.27
VPS8-202ENST00000421069 ATG4CQ96DT6 458 aa7.11□□□□□ -1.27
VPS8-202ENST00000421069 TMEM87BQ96K49 555 aa7.11□□□□□ -1.27
VPS8-202ENST00000421069 UBL7Q96S82 380 aaPredicted RBP7.11□□□□□ -1.27
VPS8-202ENST00000421069 ACSS3Q9H6R3 686 aa7.11□□□□□ -1.27
VPS8-202ENST00000421069 ANTXR1Q9H6X2 564 aa7.11□□□□□ -1.27
VPS8-202ENST00000421069 CNNM2Q9H8M5 875 aa7.11□□□□□ -1.27
VPS8-202ENST00000421069 PCOLCE2Q9UKZ9 415 aa7.11□□□□□ -1.27
VPS8-202ENST00000421069 R3HCC1Q9Y3T6 440 aaKnown RBP7.11□□□□□ -1.27
VPS8-202ENST00000421069 TNFRSF10CO14798 259 aa7.1□□□□□ -1.27
VPS8-202ENST00000421069 GAS2O43903 313 aaKnown RBP7.1□□□□□ -1.27
VPS8-202ENST00000421069 DNAJA2O60884 412 aa7.1□□□□□ -1.27
VPS8-202ENST00000421069 RNGTTO60942 597 aaKnown RBP7.1□□□□□ -1.27
VPS8-202ENST00000421069 HCLS1P14317 486 aaPredicted RBP7.1□□□□□ -1.27
VPS8-202ENST00000421069 NME1P15531 152 aaKnown RBP7.1□□□□□ -1.27
VPS8-202ENST00000421069 USP11P51784 963 aa7.1□□□□□ -1.27
VPS8-202ENST00000421069 RAB33AQ14088 237 aa7.1□□□□□ -1.27
VPS8-202ENST00000421069 OVOS1Q6IE37 1185 aa7.1□□□□□ -1.27
VPS8-202ENST00000421069 NLRC3Q7RTR2 1065 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms