RNA–Protein interactions for RNA: ENST00000417709.5

TTC38-202, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-202ENST00000417709 ZNF280CQ8ND82 737 aa17.61■□□□□ 0.41
TTC38-202ENST00000417709 NBPF3Q9H094 633 aa17.61■□□□□ 0.41
TTC38-202ENST00000417709 DOCK1Q14185 1865 aa17.61■□□□□ 0.41
TTC38-202ENST00000417709 GPR75-ASB3A0A0A6YYF3 556 aa17.6■□□□□ 0.41
TTC38-202ENST00000417709 HMGCRP04035 888 aa17.6■□□□□ 0.41
TTC38-202ENST00000417709 BMP8BP34820 402 aa17.6■□□□□ 0.41
TTC38-202ENST00000417709 RHBDL3P58872 404 aa17.6■□□□□ 0.41
TTC38-202ENST00000417709 TBC1D9Q6ZT07 1266 aa17.6■□□□□ 0.41
TTC38-202ENST00000417709 PROCA1Q8NCQ7 364 aaPredicted RBP17.6■□□□□ 0.41
TTC38-202ENST00000417709 XAGE2Q96GT9 111 aa17.6■□□□□ 0.41
TTC38-202ENST00000417709 NEUROD6Q96NK8 337 aa17.6■□□□□ 0.41
TTC38-202ENST00000417709 ASCC2Q9H1I8 757 aaPredicted RBP17.6■□□□□ 0.41
TTC38-202ENST00000417709 SMC4Q9NTJ3 1288 aa17.6■□□□□ 0.41
TTC38-202ENST00000417709 MROH7-TTC4A0A0A0MT08 1334 aa17.6■□□□□ 0.41
TTC38-202ENST00000417709 RPTORQ8N122 1335 aa17.6■□□□□ 0.41
TTC38-202ENST00000417709 ZNF521Q96K83 1311 aa17.6■□□□□ 0.41
TTC38-202ENST00000417709 E9PSI1 815 aa17.59■□□□□ 0.41
TTC38-202ENST00000417709 PABPC4Q13310 644 aaKnown RBP eCLIP17.59■□□□□ 0.41
TTC38-202ENST00000417709 RRP1BQ14684 758 aaKnown RBP17.59■□□□□ 0.41
TTC38-202ENST00000417709 Q7L0L9 218 aa17.59■□□□□ 0.41
TTC38-202ENST00000417709 ANKLE1Q8NAG6 615 aa17.59■□□□□ 0.41
TTC38-202ENST00000417709 ZNF384Q8TF68 577 aa17.59■□□□□ 0.41
TTC38-202ENST00000417709 COPRSQ9NQ92 184 aa17.59■□□□□ 0.41
TTC38-202ENST00000417709 USP17L5A8MUK1 530 aa17.58■□□□□ 0.4
TTC38-202ENST00000417709 PEX10O60683 326 aa17.58■□□□□ 0.4
TTC38-202ENST00000417709 LDHCP07864 332 aa17.58■□□□□ 0.4
TTC38-202ENST00000417709 CYP2B6P20813 491 aa17.58■□□□□ 0.4
TTC38-202ENST00000417709 TFCP2Q12800 502 aa17.58■□□□□ 0.4
TTC38-202ENST00000417709 P2RX7Q99572 595 aaKnown RBP17.58■□□□□ 0.4
TTC38-202ENST00000417709 OSBPL5Q9H0X9 879 aaPredicted RBP17.58■□□□□ 0.4
TTC38-202ENST00000417709 NOB1Q9ULX3 412 aaKnown RBP17.58■□□□□ 0.4
TTC38-202ENST00000417709 RFX7Q2KHR2 1363 aa17.57■□□□□ 0.4
TTC38-202ENST00000417709 A0A1B0GUL7 405 aa17.57■□□□□ 0.4
TTC38-202ENST00000417709 CAP2P40123 477 aa17.57■□□□□ 0.4
TTC38-202ENST00000417709 MAGEA10P43363 369 aaPredicted RBP17.57■□□□□ 0.4
TTC38-202ENST00000417709 MNX1P50219 401 aaPredicted RBP17.57■□□□□ 0.4
TTC38-202ENST00000417709 SLFN5Q08AF3 891 aa17.57■□□□□ 0.4
TTC38-202ENST00000417709 ALDH1L2Q3SY69 923 aa17.57■□□□□ 0.4
TTC38-202ENST00000417709 GORABQ5T7V8 394 aa17.57■□□□□ 0.4
TTC38-202ENST00000417709 C11orf49Q9H6J7 331 aa17.57■□□□□ 0.4
TTC38-202ENST00000417709 RAI14Q9P0K7 980 aa17.57■□□□□ 0.4
TTC38-202ENST00000417709 HDAC5Q9UQL6 1122 aa17.57■□□□□ 0.4
TTC38-202ENST00000417709 GSTO1P78417 241 aa17.56■□□□□ 0.4
TTC38-202ENST00000417709 CDCA7LQ96GN5 454 aa17.56■□□□□ 0.4
TTC38-202ENST00000417709 HMG20BQ9P0W2 317 aa17.56■□□□□ 0.4
TTC38-202ENST00000417709 AKAP2Q9Y2D5 859 aa17.56■□□□□ 0.4
TTC38-202ENST00000417709 NPM3O75607 178 aaKnown RBP17.55■□□□□ 0.4
TTC38-202ENST00000417709 MVPQ14764 893 aaKnown RBP17.55■□□□□ 0.4
TTC38-202ENST00000417709 PI16Q6UXB8 463 aa17.55■□□□□ 0.4
TTC38-202ENST00000417709 TEX11Q8IYF3 940 aa17.55■□□□□ 0.4
TTC38-202ENST00000417709 TRIB2Q92519 343 aa17.55■□□□□ 0.4
TTC38-202ENST00000417709 NSUN4Q96CB9 384 aaKnown RBP17.55■□□□□ 0.4
TTC38-202ENST00000417709 UBE2OQ9C0C9 1292 aaKnown RBP17.55■□□□□ 0.4
TTC38-202ENST00000417709 OGDHLQ9ULD0 1010 aa17.55■□□□□ 0.4
TTC38-202ENST00000417709 PDS5AQ29RF7 1337 aaKnown RBP17.54■□□□□ 0.4
TTC38-202ENST00000417709 ZBTB22O15209 634 aa17.54■□□□□ 0.4
TTC38-202ENST00000417709 PRKAR2AP13861 404 aaKnown RBP17.54■□□□□ 0.4
TTC38-202ENST00000417709 IRX3P78415 501 aaPredicted RBP17.54■□□□□ 0.4
TTC38-202ENST00000417709 GPR153Q6NV75 609 aa17.54■□□□□ 0.4
TTC38-202ENST00000417709 SPATA5Q8NB90 893 aa17.54■□□□□ 0.4
TTC38-202ENST00000417709 MEIS3Q99687 375 aa17.54■□□□□ 0.4
TTC38-202ENST00000417709 AS3MTQ9HBK9 375 aa17.54■□□□□ 0.4
TTC38-202ENST00000417709 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.54■□□□□ 0.4
TTC38-202ENST00000417709 ATAD5Q96QE3 1844 aa17.54■□□□□ 0.4
TTC38-202ENST00000417709 SRGAP3O43295 1099 aa17.53■□□□□ 0.4
TTC38-202ENST00000417709 MTMR2Q13614 643 aa17.53■□□□□ 0.4
TTC38-202ENST00000417709 SH3D19Q5HYK7 790 aa17.53■□□□□ 0.4
TTC38-202ENST00000417709 CCAR1Q8IX12 1150 aaKnown RBP17.53■□□□□ 0.4
TTC38-202ENST00000417709 TDHQ8IZJ6 230 aa17.53■□□□□ 0.4
TTC38-202ENST00000417709 GPRC5AQ8NFJ5 357 aa17.53■□□□□ 0.4
TTC38-202ENST00000417709 SH3RF3Q8TEJ3 882 aaPredicted RBP17.53■□□□□ 0.4
TTC38-202ENST00000417709 NUDT12Q9BQG2 462 aa17.53■□□□□ 0.4
TTC38-202ENST00000417709 TBC1D2Q9BYX2 928 aa17.53■□□□□ 0.4
TTC38-202ENST00000417709 MTMR10Q9NXD2 777 aa17.53■□□□□ 0.4
TTC38-202ENST00000417709 TMOD4Q9NZQ9 345 aa17.53■□□□□ 0.4
TTC38-202ENST00000417709 LRP2BPQ9P2M1 347 aa17.53■□□□□ 0.4
TTC38-202ENST00000417709 MORF4L1Q9UBU8 362 aa17.53■□□□□ 0.4
TTC38-202ENST00000417709 PLXNB2O15031 1838 aa17.52■□□□□ 0.4
TTC38-202ENST00000417709 MAP4K4O95819 1239 aaPredicted RBP17.52■□□□□ 0.4
TTC38-202ENST00000417709 BACE1P56817 501 aa17.52■□□□□ 0.4
TTC38-202ENST00000417709 JAG1P78504 1218 aa17.52■□□□□ 0.4
TTC38-202ENST00000417709 Q3C1V9 767 aa17.52■□□□□ 0.4
TTC38-202ENST00000417709 LRIT3Q3SXY7 679 aa17.52■□□□□ 0.4
TTC38-202ENST00000417709 WDR18Q9BV38 432 aa17.52■□□□□ 0.4
TTC38-202ENST00000417709 TXNRD2Q9NNW7 524 aa17.52■□□□□ 0.4
TTC38-202ENST00000417709 PI4KBQ9UBF8 816 aa17.52■□□□□ 0.4
TTC38-202ENST00000417709 RBPJLQ9UBG7 517 aa17.52■□□□□ 0.4
TTC38-202ENST00000417709 DDX60LQ5H9U9 1706 aaKnown RBP17.52■□□□□ 0.39
TTC38-202ENST00000417709 CACNB2Q08289 660 aaPredicted RBP17.51■□□□□ 0.39
TTC38-202ENST00000417709 NOL10Q9BSC4 688 aaKnown RBP17.51■□□□□ 0.39
TTC38-202ENST00000417709 API5Q9BZZ5 524 aaKnown RBP17.51■□□□□ 0.39
TTC38-202ENST00000417709 HERC5Q9UII4 1024 aaKnown RBP17.51■□□□□ 0.39
TTC38-202ENST00000417709 STXBP5LQ9Y2K9 1186 aa17.51■□□□□ 0.39
TTC38-202ENST00000417709 XRCC5P13010 732 aaKnown RBP17.5■□□□□ 0.39
TTC38-202ENST00000417709 CCND3P30281 292 aaPredicted RBP17.5■□□□□ 0.39
TTC38-202ENST00000417709 HOXA7P31268 230 aaPredicted RBP17.5■□□□□ 0.39
TTC38-202ENST00000417709 HERVK_113P62684 666 aa17.5■□□□□ 0.39
TTC38-202ENST00000417709 MDM2Q00987 491 aaPredicted RBP17.5■□□□□ 0.39
TTC38-202ENST00000417709 CCL14Q16627 93 aa17.5■□□□□ 0.39
TTC38-202ENST00000417709 SHROOM1Q2M3G4 852 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms