RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 AFG3L2Q9Y4W6 797 aa24.93■■□□□ 1.58
PTPRU-203ENST00000415600 C17orf99Q6UX52 265 aa24.92■■□□□ 1.58
PTPRU-203ENST00000415600 SH3RF3Q8TEJ3 882 aaPredicted RBP24.92■■□□□ 1.58
PTPRU-203ENST00000415600 TMEM106CQ9BVX2 250 aa24.92■■□□□ 1.58
PTPRU-203ENST00000415600 GADL1Q6ZQY3 521 aa24.91■■□□□ 1.58
PTPRU-203ENST00000415600 CPA4Q9UI42 421 aa24.91■■□□□ 1.58
PTPRU-203ENST00000415600 IDH1O75874 414 aaKnown RBP24.9■■□□□ 1.58
PTPRU-203ENST00000415600 MAP3K12Q12852 859 aa24.9■■□□□ 1.58
PTPRU-203ENST00000415600 CLASRPQ8N2M8 674 aaKnown RBP24.9■■□□□ 1.58
PTPRU-203ENST00000415600 MAST2Q6P0Q8 1798 aa24.9■■□□□ 1.58
PTPRU-203ENST00000415600 TRIM75PA6NK02 468 aa24.89■■□□□ 1.58
PTPRU-203ENST00000415600 KIF1BPQ96EK5 621 aa24.89■■□□□ 1.58
PTPRU-203ENST00000415600 MOGSQ13724 837 aa24.88■■□□□ 1.57
PTPRU-203ENST00000415600 TGFBRAP1Q8WUH2 860 aa24.88■■□□□ 1.57
PTPRU-203ENST00000415600 AS3MTQ9HBK9 375 aa24.88■■□□□ 1.57
PTPRU-203ENST00000415600 TLR7Q9NYK1 1049 aaKnown RBP24.88■■□□□ 1.57
PTPRU-203ENST00000415600 PNMA3Q9UL41 463 aa24.88■■□□□ 1.57
PTPRU-203ENST00000415600 COG6Q9Y2V7 657 aa24.88■■□□□ 1.57
PTPRU-203ENST00000415600 PTCH2Q9Y6C5 1203 aa24.88■■□□□ 1.57
PTPRU-203ENST00000415600 FMNL1O95466 1100 aaPredicted RBP24.88■■□□□ 1.57
PTPRU-203ENST00000415600 HLA-DOAP06340 250 aa24.88■■□□□ 1.57
PTPRU-203ENST00000415600 CYP7A1P22680 504 aa24.88■■□□□ 1.57
PTPRU-203ENST00000415600 TTF1Q15361 905 aaPredicted RBP24.88■■□□□ 1.57
PTPRU-203ENST00000415600 FOXP4Q8IVH2 680 aaPredicted RBP24.88■■□□□ 1.57
PTPRU-203ENST00000415600 CRACR2BQ8N4Y2 399 aaPredicted RBP24.88■■□□□ 1.57
PTPRU-203ENST00000415600 RHPN1Q8TCX5 695 aa24.88■■□□□ 1.57
PTPRU-203ENST00000415600 SMCR8Q8TEV9 937 aaPredicted RBP24.88■■□□□ 1.57
PTPRU-203ENST00000415600 PIH1D3Q9NQM4 214 aaKnown RBP24.88■■□□□ 1.57
PTPRU-203ENST00000415600 DOCK1Q14185 1865 aa24.88■■□□□ 1.57
PTPRU-203ENST00000415600 RAB11FIP3O75154 756 aa24.87■■□□□ 1.57
PTPRU-203ENST00000415600 PSMC4P43686 418 aa24.87■■□□□ 1.57
PTPRU-203ENST00000415600 PABPC4Q13310 644 aaKnown RBP eCLIP24.87■■□□□ 1.57
PTPRU-203ENST00000415600 GPAT2Q6NUI2 795 aa24.87■■□□□ 1.57
PTPRU-203ENST00000415600 IFIT2P09913 472 aaKnown RBP24.86■■□□□ 1.57
PTPRU-203ENST00000415600 CAP2P40123 477 aa24.86■■□□□ 1.57
PTPRU-203ENST00000415600 MAPKAPK5Q8IW41 473 aa24.86■■□□□ 1.57
PTPRU-203ENST00000415600 ZNF280CQ8ND82 737 aa24.86■■□□□ 1.57
PTPRU-203ENST00000415600 GINM1Q9NU53 330 aa24.86■■□□□ 1.57
PTPRU-203ENST00000415600 ZBTB40Q9NUA8 1239 aa24.86■■□□□ 1.57
PTPRU-203ENST00000415600 FLT1P17948 1338 aa24.86■■□□□ 1.57
PTPRU-203ENST00000415600 USP17L5A8MUK1 530 aa24.85■■□□□ 1.57
PTPRU-203ENST00000415600 FCGRTP55899 365 aa24.85■■□□□ 1.57
PTPRU-203ENST00000415600 PROCA1Q8NCQ7 364 aaPredicted RBP24.85■■□□□ 1.57
PTPRU-203ENST00000415600 ZNF333Q96JL9 665 aa24.85■■□□□ 1.57
PTPRU-203ENST00000415600 AGTPBP1Q9UPW5 1226 aa24.85■■□□□ 1.57
PTPRU-203ENST00000415600 ADGRA2Q96PE1 1338 aa24.85■■□□□ 1.57
PTPRU-203ENST00000415600 FAM196BA6NMK8 535 aa24.84■■□□□ 1.57
PTPRU-203ENST00000415600 ASNSP08243 561 aa24.84■■□□□ 1.57
PTPRU-203ENST00000415600 CYP2C8P10632 490 aa24.84■■□□□ 1.57
PTPRU-203ENST00000415600 MAGEB6Q8N7X4 407 aa24.84■■□□□ 1.57
PTPRU-203ENST00000415600 ARHGAP39Q9C0H5 1083 aa24.84■■□□□ 1.57
PTPRU-203ENST00000415600 IL1RAPL2Q9NP60 686 aa24.84■■□□□ 1.57
PTPRU-203ENST00000415600 SRRDQ9UH36 339 aa24.84■■□□□ 1.57
PTPRU-203ENST00000415600 ADGRA1Q86SQ6 560 aa24.84■■□□□ 1.57
PTPRU-203ENST00000415600 RAET1EQ8TD07 263 aa24.84■■□□□ 1.57
PTPRU-203ENST00000415600 KIAA0100Q14667 2235 aaKnown RBP24.83■■□□□ 1.57
PTPRU-203ENST00000415600 USP5P45974 858 aa24.83■■□□□ 1.57
PTPRU-203ENST00000415600 CAP1Q01518 475 aa24.83■■□□□ 1.57
PTPRU-203ENST00000415600 SPP2Q13103 211 aa24.83■■□□□ 1.57
PTPRU-203ENST00000415600 SLC4A8Q2Y0W8 1093 aa24.83■■□□□ 1.57
PTPRU-203ENST00000415600 APBB1O00213 710 aa24.82■■□□□ 1.56
PTPRU-203ENST00000415600 BCRP11274 1271 aa24.82■■□□□ 1.56
PTPRU-203ENST00000415600 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.82■■□□□ 1.56
PTPRU-203ENST00000415600 TRIM47Q96LD4 638 aa24.82■■□□□ 1.56
PTPRU-203ENST00000415600 SLURP2P0DP57 97 aa24.81■■□□□ 1.56
PTPRU-203ENST00000415600 PRPF38BQ5VTL8 546 aaKnown RBP24.81■■□□□ 1.56
PTPRU-203ENST00000415600 PALD1Q9ULE6 856 aa24.81■■□□□ 1.56
PTPRU-203ENST00000415600 MYPNQ86TC9 1320 aa24.8■■□□□ 1.56
PTPRU-203ENST00000415600 POTEFA5A3E0 1075 aa24.8■■□□□ 1.56
PTPRU-203ENST00000415600 OSBPP22059 807 aa24.8■■□□□ 1.56
PTPRU-203ENST00000415600 METTL16Q86W50 562 aaKnown RBP24.8■■□□□ 1.56
PTPRU-203ENST00000415600 MIGA1Q8NAN2 632 aa24.8■■□□□ 1.56
PTPRU-203ENST00000415600 TMOD4Q9NZQ9 345 aa24.8■■□□□ 1.56
PTPRU-203ENST00000415600 HTTP42858 3142 aa24.79■■□□□ 1.56
PTPRU-203ENST00000415600 ECM2O94769 699 aaPredicted RBP24.79■■□□□ 1.56
PTPRU-203ENST00000415600 GCLCP48506 637 aaPredicted RBP24.79■■□□□ 1.56
PTPRU-203ENST00000415600 DYNLL1P63167 89 aaKnown RBP24.79■■□□□ 1.56
PTPRU-203ENST00000415600 TTC6Q86TZ1 520 aa24.79■■□□□ 1.56
PTPRU-203ENST00000415600 WDR18Q9BV38 432 aa24.79■■□□□ 1.56
PTPRU-203ENST00000415600 SAP30BPQ9UHR5 308 aaKnown RBP24.79■■□□□ 1.56
PTPRU-203ENST00000415600 HMGCS2P54868 508 aa24.78■■□□□ 1.56
PTPRU-203ENST00000415600 CCDC84Q86UT8 332 aaPredicted RBP24.78■■□□□ 1.56
PTPRU-203ENST00000415600 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.78■■□□□ 1.56
PTPRU-203ENST00000415600 C19orf81C9J6K1 198 aa24.77■■□□□ 1.56
PTPRU-203ENST00000415600 AAMPQ13685 434 aa24.77■■□□□ 1.56
PTPRU-203ENST00000415600 SH3TC2Q8TF17 1288 aa24.77■■□□□ 1.56
PTPRU-203ENST00000415600 BCL11AQ9H165 835 aa24.77■■□□□ 1.56
PTPRU-203ENST00000415600 ANTXR1Q9H6X2 564 aa24.77■■□□□ 1.56
PTPRU-203ENST00000415600 BIN2Q9UBW5 565 aaPredicted RBP24.77■■□□□ 1.56
PTPRU-203ENST00000415600 GRK4P32298 578 aa24.76■■□□□ 1.55
PTPRU-203ENST00000415600 UBXN2AP68543 259 aa24.76■■□□□ 1.55
PTPRU-203ENST00000415600 SH3D19Q5HYK7 790 aa24.76■■□□□ 1.55
PTPRU-203ENST00000415600 SLC9C2Q5TAH2 1124 aa24.76■■□□□ 1.55
PTPRU-203ENST00000415600 DNAJC2Q99543 621 aaKnown RBP24.76■■□□□ 1.55
PTPRU-203ENST00000415600 NDUFB9Q9Y6M9 179 aa24.76■■□□□ 1.55
PTPRU-203ENST00000415600 PTPRFP10586 1907 aa24.76■■□□□ 1.55
PTPRU-203ENST00000415600 RBBP6Q7Z6E9 1792 aaKnown RBP24.76■■□□□ 1.55
PTPRU-203ENST00000415600 MAGEB6P1A0A0J9YX57 407 aa24.76■■□□□ 1.55
PTPRU-203ENST00000415600 TNPO2O14787 897 aaKnown RBP24.76■■□□□ 1.55
PTPRU-203ENST00000415600 BACE1P56817 501 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms