RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 IARSP41252 1262 aaKnown RBP8.59□□□□□ -1.03
RGPD1-201ENST00000398193 GZF1Q9H116 711 aaPredicted RBP8.59□□□□□ -1.03
RGPD1-201ENST00000398193 PRPF3O43395 683 aaKnown RBP8.59□□□□□ -1.04
RGPD1-201ENST00000398193 GADD45BO75293 160 aaPredicted RBP8.59□□□□□ -1.04
RGPD1-201ENST00000398193 KLRK1P26718 216 aa8.59□□□□□ -1.04
RGPD1-201ENST00000398193 FOXP1Q9H334 677 aaPredicted RBP8.59□□□□□ -1.04
RGPD1-201ENST00000398193 CCT2P78371 535 aaKnown RBP8.58□□□□□ -1.04
RGPD1-201ENST00000398193 HDLBPQ00341 1268 aaKnown RBP8.58□□□□□ -1.04
RGPD1-201ENST00000398193 MIGA1Q8NAN2 632 aa8.58□□□□□ -1.04
RGPD1-201ENST00000398193 GOLGA6L4A6NEF3 574 aa8.58□□□□□ -1.04
RGPD1-201ENST00000398193 NPM3O75607 178 aaKnown RBP8.58□□□□□ -1.04
RGPD1-201ENST00000398193 MMP14P50281 582 aa8.58□□□□□ -1.04
RGPD1-201ENST00000398193 FOXD4L5Q5VV16 416 aaPredicted RBP8.58□□□□□ -1.04
RGPD1-201ENST00000398193 DGKHQ86XP1 1220 aa8.58□□□□□ -1.04
RGPD1-201ENST00000398193 JMYQ8N9B5 988 aa8.58□□□□□ -1.04
RGPD1-201ENST00000398193 FOXD4L4Q8WXT5 416 aaPredicted RBP8.58□□□□□ -1.04
RGPD1-201ENST00000398193 GNAQP50148 359 aa8.58□□□□□ -1.04
RGPD1-201ENST00000398193 KIF23Q02241 960 aaPredicted RBP8.58□□□□□ -1.04
RGPD1-201ENST00000398193 C12orf60Q5U649 245 aa8.58□□□□□ -1.04
RGPD1-201ENST00000398193 NBPF11Q86T75 865 aa8.58□□□□□ -1.04
RGPD1-201ENST00000398193 BMP15O95972 392 aa8.58□□□□□ -1.04
RGPD1-201ENST00000398193 ALG1Q9BT22 464 aa8.58□□□□□ -1.04
RGPD1-201ENST00000398193 STK32BQ9NY57 414 aa8.58□□□□□ -1.04
RGPD1-201ENST00000398193 FAM237AA0A1B0GTK4 181 aa8.57□□□□□ -1.04
RGPD1-201ENST00000398193 FIBPO43427 364 aa8.57□□□□□ -1.04
RGPD1-201ENST00000398193 KIF5BP33176 963 aa8.57□□□□□ -1.04
RGPD1-201ENST00000398193 TTC6Q86TZ1 520 aa8.57□□□□□ -1.04
RGPD1-201ENST00000398193 ZNF654Q8IZM8 581 aa8.57□□□□□ -1.04
RGPD1-201ENST00000398193 TACC3Q9Y6A5 838 aa8.57□□□□□ -1.04
RGPD1-201ENST00000398193 DYNLL1P63167 89 aaKnown RBP8.57□□□□□ -1.04
RGPD1-201ENST00000398193 SAFBQ15424 915 aaKnown RBP eCLIP8.57□□□□□ -1.04
RGPD1-201ENST00000398193 HHIPL2Q6UWX4 724 aa8.57□□□□□ -1.04
RGPD1-201ENST00000398193 CRACR2BQ8N4Y2 399 aaPredicted RBP8.57□□□□□ -1.04
RGPD1-201ENST00000398193 TIGD1Q96MW7 591 aa8.57□□□□□ -1.04
RGPD1-201ENST00000398193 FAM217BQ9NTX9 383 aaPredicted RBP8.57□□□□□ -1.04
RGPD1-201ENST00000398193 CEP131Q9UPN4 1083 aa8.57□□□□□ -1.04
RGPD1-201ENST00000398193 SNAP23O00161 211 aa8.57□□□□□ -1.04
RGPD1-201ENST00000398193 IFIT1BQ5T764 474 aaKnown RBP8.57□□□□□ -1.04
RGPD1-201ENST00000398193 ADALQ6DHV7 355 aa8.57□□□□□ -1.04
RGPD1-201ENST00000398193 GALNT17Q6IS24 598 aa8.57□□□□□ -1.04
RGPD1-201ENST00000398193 MPNDQ8N594 471 aa8.57□□□□□ -1.04
RGPD1-201ENST00000398193 FANCBQ8NB91 859 aa8.57□□□□□ -1.04
RGPD1-201ENST00000398193 CNKSR1Q969H4 720 aa8.57□□□□□ -1.04
RGPD1-201ENST00000398193 FUCA2Q9BTY2 467 aa8.57□□□□□ -1.04
RGPD1-201ENST00000398193 NUP62CLQ9H1M0 184 aa8.57□□□□□ -1.04
RGPD1-201ENST00000398193 SWAP70Q9UH65 585 aa8.57□□□□□ -1.04
RGPD1-201ENST00000398193 CCDC192P0DO97 292 aa8.57□□□□□ -1.04
RGPD1-201ENST00000398193 NOVP48745 357 aa8.57□□□□□ -1.04
RGPD1-201ENST00000398193 DDX11Q96FC9 970 aa8.57□□□□□ -1.04
RGPD1-201ENST00000398193 CAMKK2Q96RR4 588 aa8.57□□□□□ -1.04
RGPD1-201ENST00000398193 SNED1Q8TER0 1413 aa8.56□□□□□ -1.04
RGPD1-201ENST00000398193 MYH2Q9UKX2 1941 aa8.56□□□□□ -1.04
RGPD1-201ENST00000398193 TNKSO95271 1327 aa8.56□□□□□ -1.04
RGPD1-201ENST00000398193 hCG_1984214I3L0E3 225 aa8.56□□□□□ -1.04
RGPD1-201ENST00000398193 MAP3K11Q16584 847 aa8.56□□□□□ -1.04
RGPD1-201ENST00000398193 C16orf86Q6ZW13 317 aa8.56□□□□□ -1.04
RGPD1-201ENST00000398193 ZNF713Q8N859 430 aaPredicted RBP8.56□□□□□ -1.04
RGPD1-201ENST00000398193 NCOA5Q9HCD5 579 aaKnown RBP8.56□□□□□ -1.04
RGPD1-201ENST00000398193 CHAF1AQ13111 956 aaPredicted RBP8.56□□□□□ -1.04
RGPD1-201ENST00000398193 GAS2L3Q86XJ1 694 aa8.56□□□□□ -1.04
RGPD1-201ENST00000398193 FAM43AQ8N2R8 423 aa8.56□□□□□ -1.04
RGPD1-201ENST00000398193 POLLQ9UGP5 575 aa8.56□□□□□ -1.04
RGPD1-201ENST00000398193 GREB1LQ9C091 1923 aaPredicted RBP8.56□□□□□ -1.04
RGPD1-201ENST00000398193 MMP1P03956 469 aa8.56□□□□□ -1.04
RGPD1-201ENST00000398193 CDC27P30260 824 aa8.56□□□□□ -1.04
RGPD1-201ENST00000398193 USP5P45974 858 aa8.56□□□□□ -1.04
RGPD1-201ENST00000398193 CHST3Q7LGC8 479 aa8.56□□□□□ -1.04
RGPD1-201ENST00000398193 ILDR1Q86SU0 546 aaPredicted RBP8.56□□□□□ -1.04
RGPD1-201ENST00000398193 SLC16A10Q8TF71 515 aa8.56□□□□□ -1.04
RGPD1-201ENST00000398193 BRMS1Q9HCU9 246 aa8.56□□□□□ -1.04
RGPD1-201ENST00000398193 AATFQ9NY61 560 aaKnown RBP eCLIP8.56□□□□□ -1.04
RGPD1-201ENST00000398193 NAP1L2Q9ULW6 460 aaPredicted RBP8.56□□□□□ -1.04
RGPD1-201ENST00000398193 MYSM1Q5VVJ2 828 aa8.56□□□□□ -1.04
RGPD1-201ENST00000398193 PODNQ7Z5L7 613 aa8.56□□□□□ -1.04
RGPD1-201ENST00000398193 SDR42E1Q8WUS8 393 aa8.56□□□□□ -1.04
RGPD1-201ENST00000398193 NSFL1CQ9UNZ2 370 aaKnown RBP8.56□□□□□ -1.04
RGPD1-201ENST00000398193 SYCE3A1L190 88 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 PRDX5P30044 214 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 SLC15A2Q16348 729 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.55□□□□□ -1.04
RGPD1-201ENST00000398193 RANBP6O60518 1105 aaKnown RBP8.55□□□□□ -1.04
RGPD1-201ENST00000398193 FAM160A1Q05DH4 1040 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 GRM4Q14833 912 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 KRT40Q6A162 431 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 SMIM5Q71RC9 77 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 ENAHQ8N8S7 591 aaPredicted RBP8.55□□□□□ -1.04
RGPD1-201ENST00000398193 PDLIM2Q96JY6 352 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 H0YIN7 160 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 AKAP17AQ02040 695 aaKnown RBP8.55□□□□□ -1.04
RGPD1-201ENST00000398193 SOGA3Q5TF21 947 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 CCDC73Q6ZRK6 1079 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 ZNF579Q8NAF0 562 aaKnown RBP8.55□□□□□ -1.04
RGPD1-201ENST00000398193 LINC00301Q8NCQ3 95 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 EHD4Q9H223 541 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 MINDY4BA8MYZ0 360 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 USP17L12C9JPN9 530 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 USP17L21D6R901 530 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 TPM3P06753 285 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 BTDP43251 543 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 RILPL1Q5EBL4 403 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms