RNA–Protein interactions for RNA: ENST00000394990.8

SMIM29-202, Transcript of small integral membrane protein 29, humanhuman

TSL 1 (best) BASIC

Gene SMIM29, Length 792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-202ENST00000394990 PLXNB2O15031 1838 aa17.05■□□□□ 0.32
SMIM29-202ENST00000394990 SLC4A2P04920 1241 aa17.04■□□□□ 0.32
SMIM29-202ENST00000394990 FLIIQ13045 1269 aa17.04■□□□□ 0.32
SMIM29-202ENST00000394990 LHX8Q68G74 356 aa17.04■□□□□ 0.32
SMIM29-202ENST00000394990 VPS37DQ86XT2 251 aa17.04■□□□□ 0.32
SMIM29-202ENST00000394990 PICK1Q9NRD5 415 aa17.04■□□□□ 0.32
SMIM29-202ENST00000394990 TRIM75PA6NK02 468 aa17.03■□□□□ 0.32
SMIM29-202ENST00000394990 VAMP4O75379 141 aa17.03■□□□□ 0.32
SMIM29-202ENST00000394990 MVPQ14764 893 aaKnown RBP17.03■□□□□ 0.32
SMIM29-202ENST00000394990 SHHQ15465 462 aa17.03■□□□□ 0.32
SMIM29-202ENST00000394990 USP38Q8NB14 1042 aa17.03■□□□□ 0.32
SMIM29-202ENST00000394990 PANK1Q8TE04 598 aa17.03■□□□□ 0.32
SMIM29-202ENST00000394990 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.03■□□□□ 0.32
SMIM29-202ENST00000394990 DDX19BQ9UMR2 479 aa17.03■□□□□ 0.32
SMIM29-202ENST00000394990 COG6Q9Y2V7 657 aa17.03■□□□□ 0.32
SMIM29-202ENST00000394990 DAGLAQ9Y4D2 1042 aa17.03■□□□□ 0.32
SMIM29-202ENST00000394990 PHIPQ8WWQ0 1821 aa17.03■□□□□ 0.32
SMIM29-202ENST00000394990 MAST2Q6P0Q8 1798 aa17.02■□□□□ 0.32
SMIM29-202ENST00000394990 TMEM265A0A087WTH1 108 aa17.02■□□□□ 0.32
SMIM29-202ENST00000394990 FRAT2O75474 233 aaPredicted RBP17.02■□□□□ 0.32
SMIM29-202ENST00000394990 C9orf50Q5SZB4 431 aa17.02■□□□□ 0.32
SMIM29-202ENST00000394990 LTBP2Q14767 1821 aa17.01■□□□□ 0.31
SMIM29-202ENST00000394990 SLURP2P0DP57 97 aa17.01■□□□□ 0.31
SMIM29-202ENST00000394990 CYP2B6P20813 491 aa17.01■□□□□ 0.31
SMIM29-202ENST00000394990 SMAD3P84022 425 aaKnown RBP17.01■□□□□ 0.31
SMIM29-202ENST00000394990 MAP3K10Q02779 954 aa17.01■□□□□ 0.31
SMIM29-202ENST00000394990 CACNB2Q08289 660 aaPredicted RBP17.01■□□□□ 0.31
SMIM29-202ENST00000394990 FKBP5Q13451 457 aaPredicted RBP17.01■□□□□ 0.31
SMIM29-202ENST00000394990 CCDC84Q86UT8 332 aaPredicted RBP17.01■□□□□ 0.31
SMIM29-202ENST00000394990 PNMA3Q9UL41 463 aa17.01■□□□□ 0.31
SMIM29-202ENST00000394990 AK9Q5TCS8 1911 aa17■□□□□ 0.31
SMIM29-202ENST00000394990 CCND3P30281 292 aaPredicted RBP17■□□□□ 0.31
SMIM29-202ENST00000394990 GCLCP48506 637 aaPredicted RBP17■□□□□ 0.31
SMIM29-202ENST00000394990 MAP3K12Q12852 859 aa17■□□□□ 0.31
SMIM29-202ENST00000394990 DIXDC1Q155Q3 683 aa17■□□□□ 0.31
SMIM29-202ENST00000394990 CAVIN4Q5BKX8 364 aa17■□□□□ 0.31
SMIM29-202ENST00000394990 API5Q9BZZ5 524 aaKnown RBP17■□□□□ 0.31
SMIM29-202ENST00000394990 NOB1Q9ULX3 412 aaKnown RBP17■□□□□ 0.31
SMIM29-202ENST00000394990 MROH5Q6ZUA9 1318 aa16.99■□□□□ 0.31
SMIM29-202ENST00000394990 BDP1A6H8Y1 2624 aa16.99■□□□□ 0.31
SMIM29-202ENST00000394990 TRIM27P14373 513 aa16.99■□□□□ 0.31
SMIM29-202ENST00000394990 SH3BP5LQ7L8J4 393 aa16.99■□□□□ 0.31
SMIM29-202ENST00000394990 MRPL50Q8N5N7 158 aaKnown RBP16.99■□□□□ 0.31
SMIM29-202ENST00000394990 XIRP2A4UGR9 3374 aa16.98■□□□□ 0.31
SMIM29-202ENST00000394990 NCOR1O75376 2440 aa16.98■□□□□ 0.31
SMIM29-202ENST00000394990 XRCC5P13010 732 aaKnown RBP16.98■□□□□ 0.31
SMIM29-202ENST00000394990 BEND3Q5T5X7 828 aa16.98■□□□□ 0.31
SMIM29-202ENST00000394990 VGLL2Q8N8G2 317 aa16.98■□□□□ 0.31
SMIM29-202ENST00000394990 PROCA1Q8NCQ7 364 aaPredicted RBP16.98■□□□□ 0.31
SMIM29-202ENST00000394990 SENP6Q9GZR1 1112 aaPredicted RBP16.98■□□□□ 0.31
SMIM29-202ENST00000394990 DOCK2Q92608 1830 aa16.98■□□□□ 0.31
SMIM29-202ENST00000394990 DOCK1Q14185 1865 aa16.97■□□□□ 0.31
SMIM29-202ENST00000394990 CTNND1O60716 968 aaKnown RBP16.97■□□□□ 0.31
SMIM29-202ENST00000394990 USP40Q9NVE5 1235 aa16.97■□□□□ 0.31
SMIM29-202ENST00000394990 MORF4L1Q9UBU8 362 aa16.97■□□□□ 0.31
SMIM29-202ENST00000394990 LRRFIP2Q9Y608 721 aaKnown RBP16.97■□□□□ 0.31
SMIM29-202ENST00000394990 F6X3S4 739 aa16.96■□□□□ 0.31
SMIM29-202ENST00000394990 GRM8O00222 908 aa16.96■□□□□ 0.31
SMIM29-202ENST00000394990 RLBP1P12271 317 aa16.96■□□□□ 0.31
SMIM29-202ENST00000394990 ITPRIPQ8IWB1 547 aa16.96■□□□□ 0.31
SMIM29-202ENST00000394990 USP6NLQ92738 828 aa16.96■□□□□ 0.31
SMIM29-202ENST00000394990 NUDT12Q9BQG2 462 aa16.96■□□□□ 0.31
SMIM29-202ENST00000394990 ASCC2Q9H1I8 757 aaPredicted RBP16.96■□□□□ 0.31
SMIM29-202ENST00000394990 RWDD1Q9H446 243 aaPredicted RBP16.96■□□□□ 0.31
SMIM29-202ENST00000394990 LOC285556D6RIA3 1793 aa16.96■□□□□ 0.31
SMIM29-202ENST00000394990 PTPRCP08575 1304 aa16.96■□□□□ 0.3
SMIM29-202ENST00000394990 RFX7Q2KHR2 1363 aa16.95■□□□□ 0.3
SMIM29-202ENST00000394990 PEX10O60683 326 aa16.95■□□□□ 0.3
SMIM29-202ENST00000394990 ZKSCAN1P17029 563 aaPredicted RBP16.95■□□□□ 0.3
SMIM29-202ENST00000394990 RGS3P49796 1198 aa16.95■□□□□ 0.3
SMIM29-202ENST00000394990 ATN1P54259 1190 aaPredicted RBP16.95■□□□□ 0.3
SMIM29-202ENST00000394990 CCL14Q16627 93 aa16.95■□□□□ 0.3
SMIM29-202ENST00000394990 LRRC24Q50LG9 513 aa16.95■□□□□ 0.3
SMIM29-202ENST00000394990 SOCS4Q8WXH5 440 aa16.95■□□□□ 0.3
SMIM29-202ENST00000394990 KAZALD1Q96I82 304 aa16.95■□□□□ 0.3
SMIM29-202ENST00000394990 IDI2Q9BXS1 227 aa16.95■□□□□ 0.3
SMIM29-202ENST00000394990 DDTLA6NHG4 134 aaPredicted RBP16.94■□□□□ 0.3
SMIM29-202ENST00000394990 ENTPD3O75355 529 aa16.94■□□□□ 0.3
SMIM29-202ENST00000394990 PDE8BO95263 885 aa16.94■□□□□ 0.3
SMIM29-202ENST00000394990 PRDX5P30044 214 aa16.94■□□□□ 0.3
SMIM29-202ENST00000394990 RTP1P59025 263 aa16.94■□□□□ 0.3
SMIM29-202ENST00000394990 GRIN2CQ14957 1233 aa16.94■□□□□ 0.3
SMIM29-202ENST00000394990 WDR66Q8TBY9 1149 aa16.94■□□□□ 0.3
SMIM29-202ENST00000394990 PRKAG2Q9UGJ0 569 aa16.94■□□□□ 0.3
SMIM29-202ENST00000394990 FRMPD3Q5JV73 1810 aa16.93■□□□□ 0.3
SMIM29-202ENST00000394990 SPP2Q13103 211 aa16.93■□□□□ 0.3
SMIM29-202ENST00000394990 METTL24Q5JXM2 366 aa16.93■□□□□ 0.3
SMIM29-202ENST00000394990 TRMT44Q8IYL2 757 aaKnown RBP16.93■□□□□ 0.3
SMIM29-202ENST00000394990 SYNGAP1Q96PV0 1343 aa16.93■□□□□ 0.3
SMIM29-202ENST00000394990 FGFR2P21802 821 aa16.92■□□□□ 0.3
SMIM29-202ENST00000394990 HMGCS2P54868 508 aa16.92■□□□□ 0.3
SMIM29-202ENST00000394990 PABPC4Q13310 644 aaKnown RBP eCLIP16.92■□□□□ 0.33e-7■■■□□ 17.8
SMIM29-202ENST00000394990 TMEM57Q8N5G2 664 aa16.92■□□□□ 0.3
SMIM29-202ENST00000394990 ADAMTS19Q8TE59 1207 aa16.92■□□□□ 0.3
SMIM29-202ENST00000394990 BADQ92934 168 aa16.92■□□□□ 0.3
SMIM29-202ENST00000394990 SUCLG2Q96I99 432 aa16.92■□□□□ 0.3
SMIM29-202ENST00000394990 TXNRD2Q9NNW7 524 aa16.92■□□□□ 0.3
SMIM29-202ENST00000394990 MORN1Q5T089 497 aa16.91■□□□□ 0.3
SMIM29-202ENST00000394990 ZNF280CQ8ND82 737 aa16.91■□□□□ 0.3
SMIM29-202ENST00000394990 ATXN2LQ8WWM7 1075 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms