RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 UTP14CQ5TAP6 766 aaKnown RBP13.4□□□□□ -0.26
PCDHA9-201ENST00000378122 SV2BQ7L1I2 683 aa13.4□□□□□ -0.26
PCDHA9-201ENST00000378122 GPIHBP1Q8IV16 184 aa13.4□□□□□ -0.26
PCDHA9-201ENST00000378122 KCNA6P17658 529 aa13.4□□□□□ -0.26
PCDHA9-201ENST00000378122 IRS4O14654 1257 aaPredicted RBP13.4□□□□□ -0.26
PCDHA9-201ENST00000378122 GGA1Q9UJY5 639 aa13.4□□□□□ -0.26
PCDHA9-201ENST00000378122 NPATQ14207 1427 aa13.39□□□□□ -0.27
PCDHA9-201ENST00000378122 PDE4DQ08499 809 aa13.39□□□□□ -0.27
PCDHA9-201ENST00000378122 TTF2Q9UNY4 1162 aaKnown RBP13.39□□□□□ -0.27
PCDHA9-201ENST00000378122 DDX39AO00148 427 aaKnown RBP13.39□□□□□ -0.27
PCDHA9-201ENST00000378122 PIK3AP1Q6ZUJ8 805 aa13.39□□□□□ -0.27
PCDHA9-201ENST00000378122 KRT27Q7Z3Y8 459 aa13.39□□□□□ -0.27
PCDHA9-201ENST00000378122 C8orf74Q6P047 294 aa13.39□□□□□ -0.27
PCDHA9-201ENST00000378122 POTEDQ86YR6 584 aa13.39□□□□□ -0.27
PCDHA9-201ENST00000378122 IMPACTQ9P2X3 320 aa13.39□□□□□ -0.27
PCDHA9-201ENST00000378122 ATP6V0A2Q9Y487 856 aa13.39□□□□□ -0.27
PCDHA9-201ENST00000378122 FLT4P35916 1363 aa13.39□□□□□ -0.27
PCDHA9-201ENST00000378122 TRIM14Q14142 442 aa13.39□□□□□ -0.27
PCDHA9-201ENST00000378122 NAP1L3Q99457 506 aaPredicted RBP13.39□□□□□ -0.27
PCDHA9-201ENST00000378122 SPDYE3A6NKU9 549 aa13.39□□□□□ -0.27
PCDHA9-201ENST00000378122 PPP2R5DQ14738 602 aa13.39□□□□□ -0.27
PCDHA9-201ENST00000378122 LETM2Q2VYF4 491 aa13.39□□□□□ -0.27
PCDHA9-201ENST00000378122 TNNI3KQ59H18 835 aa13.39□□□□□ -0.27
PCDHA9-201ENST00000378122 INTS8Q75QN2 995 aaKnown RBP13.39□□□□□ -0.27
PCDHA9-201ENST00000378122 FPGT-TNNI3KV9GXZ4 949 aa13.39□□□□□ -0.27
PCDHA9-201ENST00000378122 NDUFAB1O14561 156 aa13.39□□□□□ -0.27
PCDHA9-201ENST00000378122 CCNT1O60563 726 aaKnown RBP13.39□□□□□ -0.27
PCDHA9-201ENST00000378122 CLNS1AP54105 237 aaKnown RBP13.39□□□□□ -0.27
PCDHA9-201ENST00000378122 DOK7Q18PE1 504 aa13.39□□□□□ -0.27
PCDHA9-201ENST00000378122 CCDC26Q8TAB7 109 aa13.39□□□□□ -0.27
PCDHA9-201ENST00000378122 MTX1Q13505 466 aa13.38□□□□□ -0.27
PCDHA9-201ENST00000378122 KLHDC4Q8TBB5 520 aa13.38□□□□□ -0.27
PCDHA9-201ENST00000378122 ARMT1Q9H993 441 aa13.38□□□□□ -0.27
PCDHA9-201ENST00000378122 ASXL2Q76L83 1435 aa13.38□□□□□ -0.27
PCDHA9-201ENST00000378122 TMEM63CQ9P1W3 806 aa13.38□□□□□ -0.27
PCDHA9-201ENST00000378122 RNMTO43148 476 aaKnown RBP13.38□□□□□ -0.27
PCDHA9-201ENST00000378122 HAUS7Q99871 368 aa13.38□□□□□ -0.27
PCDHA9-201ENST00000378122 TCP10L2B9ZVM9 353 aa13.38□□□□□ -0.27
PCDHA9-201ENST00000378122 ZNF202O95125 648 aa13.38□□□□□ -0.27
PCDHA9-201ENST00000378122 TUBB2AQ13885 445 aa13.38□□□□□ -0.27
PCDHA9-201ENST00000378122 ASIC2Q16515 512 aa13.38□□□□□ -0.27
PCDHA9-201ENST00000378122 PPP4R4Q6NUP7 873 aa13.38□□□□□ -0.27
PCDHA9-201ENST00000378122 TUBB2BQ9BVA1 445 aa13.38□□□□□ -0.27
PCDHA9-201ENST00000378122 IRX5P78411 483 aaPredicted RBP13.38□□□□□ -0.27
PCDHA9-201ENST00000378122 IFRD2Q12894 506 aaPredicted RBP13.38□□□□□ -0.27
PCDHA9-201ENST00000378122 UAP1Q16222 522 aaPredicted RBP13.38□□□□□ -0.27
PCDHA9-201ENST00000378122 MRRFQ96E11 262 aaKnown RBP13.38□□□□□ -0.27
PCDHA9-201ENST00000378122 EYA1Q99502 592 aa13.38□□□□□ -0.27
PCDHA9-201ENST00000378122 TRIM7Q9C029 511 aa13.38□□□□□ -0.27
PCDHA9-201ENST00000378122 PPP1R12AO14974 1030 aaPredicted RBP13.37□□□□□ -0.27
PCDHA9-201ENST00000378122 KRT5P13647 590 aa13.37□□□□□ -0.27
PCDHA9-201ENST00000378122 DLGAP5Q15398 846 aa13.37□□□□□ -0.27
PCDHA9-201ENST00000378122 LLPHQ9BRT6 129 aaKnown RBP13.37□□□□□ -0.27
PCDHA9-201ENST00000378122 SWAP70Q9UH65 585 aa13.37□□□□□ -0.27
PCDHA9-201ENST00000378122 TBC1D8BQ0IIM8 1120 aa13.37□□□□□ -0.27
PCDHA9-201ENST00000378122 TRAF5O00463 557 aa13.37□□□□□ -0.27
PCDHA9-201ENST00000378122 PARP1P09874 1014 aaKnown RBP13.37□□□□□ -0.27
PCDHA9-201ENST00000378122 CEP85LQ5SZL2 805 aa13.37□□□□□ -0.27
PCDHA9-201ENST00000378122 SUPT20HQ8NEM7 779 aa13.37□□□□□ -0.27
PCDHA9-201ENST00000378122 NDUFB9Q9Y6M9 179 aa13.37□□□□□ -0.27
PCDHA9-201ENST00000378122 BLMP54132 1417 aaPredicted RBP13.37□□□□□ -0.27
PCDHA9-201ENST00000378122 ARHGEF12Q9NZN5 1544 aa13.37□□□□□ -0.27
PCDHA9-201ENST00000378122 KCNQ4P56696 695 aa13.37□□□□□ -0.27
PCDHA9-201ENST00000378122 PAK1Q13153 545 aa13.37□□□□□ -0.27
PCDHA9-201ENST00000378122 PSMC4P43686 418 aa13.37□□□□□ -0.27
PCDHA9-201ENST00000378122 CTDSPL2Q05D32 466 aa13.37□□□□□ -0.27
PCDHA9-201ENST00000378122 SECISBP2LQ93073 1101 aaKnown RBP13.37□□□□□ -0.27
PCDHA9-201ENST00000378122 UTP11Q9Y3A2 253 aaKnown RBP13.37□□□□□ -0.27
PCDHA9-201ENST00000378122 JAK2O60674 1132 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 DEXIO95424 95 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 GBP1P32455 592 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 PNOCQ13519 176 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 TAB2Q9NYJ8 693 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 MTUS1Q9ULD2 1270 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 CHMP2AO43633 222 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 EPB41P11171 864 aaKnown RBP13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 GNA11P29992 359 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 CALCOCO2Q13137 446 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 CCDC65Q8IXS2 484 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 TRIM35Q9UPQ4 493 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 AOX1Q06278 1338 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 CUTAO60888 179 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 Q3C1V9 767 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 GABPAQ06546 454 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 RASA3Q14644 834 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 RNF34Q969K3 372 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 GOLGA6BA6NDN3 693 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 CIB2O75838 187 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 TIMM10P62072 90 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 STMN2Q93045 179 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 MYL10Q9BUA6 226 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 IMPG2Q9BZV3 1241 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 ZNF608Q9ULD9 1512 aaPredicted RBP13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 PNMA6EA0A0J9YXQ4 647 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 HOXC9P31274 260 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 GPCPD1Q9NPB8 672 aa13.36□□□□□ -0.27
PCDHA9-201ENST00000378122 SGSM2O43147 1006 aa13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 BEND3Q5T5X7 828 aa13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 MICAL1Q8TDZ2 1067 aa13.35□□□□□ -0.27
PCDHA9-201ENST00000378122 CPSF2Q9P2I0 782 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms