RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 A0A1B0GU33 70 aa1.7□□□□□ -2.14
HERC1-203ENST00000558532 SPINK6Q6UWN8 80 aa1.7□□□□□ -2.14
HERC1-203ENST00000558532 USP24Q9UPU5 2620 aa1.7□□□□□ -2.14
HERC1-203ENST00000558532 HECTD4Q9Y4D8 3996 aa1.7□□□□□ -2.14
HERC1-203ENST00000558532 DNAH10Q8IVF4 4471 aa1.7□□□□□ -2.14
HERC1-203ENST00000558532 TEP1Q99973 2627 aaKnown RBP1.69□□□□□ -2.14
HERC1-203ENST00000558532 NBDYA0A0U1RRE5 68 aa1.69□□□□□ -2.14
HERC1-203ENST00000558532 C20orf166-AS1Q96NR2 134 aa1.69□□□□□ -2.14
HERC1-203ENST00000558532 SMR3AQ99954 134 aa1.69□□□□□ -2.14
HERC1-203ENST00000558532 FBN1P35555 2871 aaKnown RBP1.69□□□□□ -2.14
HERC1-203ENST00000558532 VPS13DQ5THJ4 4388 aa1.68□□□□□ -2.14
HERC1-203ENST00000558532 PRKDCP78527 4128 aaKnown RBP1.68□□□□□ -2.14
HERC1-203ENST00000558532 K7ERS5 55 aa1.68□□□□□ -2.14
HERC1-203ENST00000558532 RPS29P62273 56 aaKnown RBP1.68□□□□□ -2.14
HERC1-203ENST00000558532 KRTAP13-2Q52LG2 175 aa1.68□□□□□ -2.14
HERC1-203ENST00000558532 COX6B2Q6YFQ2 88 aa1.68□□□□□ -2.14
HERC1-203ENST00000558532 CIRBP-AS1Q8TBR5 109 aa1.68□□□□□ -2.14
HERC1-203ENST00000558532 HELZ2Q9BYK8 2649 aaKnown RBP1.68□□□□□ -2.14
HERC1-203ENST00000558532 TPRXLQ17RH7 258 aa1.67□□□□□ -2.14
HERC1-203ENST00000558532 DNAH8Q96JB1 4490 aa1.67□□□□□ -2.14
HERC1-203ENST00000558532 FRAS1Q86XX4 4008 aa1.67□□□□□ -2.14
HERC1-203ENST00000558532 DNAH9Q9NYC9 4486 aa1.67□□□□□ -2.14
HERC1-203ENST00000558532 MAST4O15021 2626 aa1.67□□□□□ -2.14
HERC1-203ENST00000558532 HUWE1Q7Z6Z7 4374 aaKnown RBP1.66□□□□□ -2.14
HERC1-203ENST00000558532 DNAH17Q9UFH2 4485 aa1.66□□□□□ -2.14
HERC1-203ENST00000558532 ATRQ13535 2644 aa1.66□□□□□ -2.14
HERC1-203ENST00000558532 CSMD3Q7Z407 3707 aa1.66□□□□□ -2.14
HERC1-203ENST00000558532 PP632Q6XCG6 107 aa1.66□□□□□ -2.14
HERC1-203ENST00000558532 UBE2DNLQ8IWF7 75 aa1.66□□□□□ -2.14
HERC1-203ENST00000558532 SPINK1P00995 79 aa1.65□□□□□ -2.15
HERC1-203ENST00000558532 RPL37P61927 97 aaKnown RBP1.65□□□□□ -2.15
HERC1-203ENST00000558532 DNAH6Q9C0G6 4158 aa1.65□□□□□ -2.15
HERC1-203ENST00000558532 MEGF8Q7Z7M0 2845 aa1.64□□□□□ -2.15
HERC1-203ENST00000558532 FLNBO75369 2602 aaKnown RBP1.64□□□□□ -2.15
HERC1-203ENST00000558532 ITPR2Q14571 2701 aa1.63□□□□□ -2.15
HERC1-203ENST00000558532 FASNP49327 2511 aaKnown RBP1.63□□□□□ -2.15
HERC1-203ENST00000558532 SPINT4Q6UDR6 99 aa1.63□□□□□ -2.15
HERC1-203ENST00000558532 NOTCH1P46531 2555 aa1.62□□□□□ -2.15
HERC1-203ENST00000558532 NBEAL1Q6ZS30 2694 aa1.62□□□□□ -2.15
HERC1-203ENST00000558532 KRTAP13-4Q3LI77 160 aa1.62□□□□□ -2.15
HERC1-203ENST00000558532 STAB2Q8WWQ8 2551 aa1.62□□□□□ -2.15
HERC1-203ENST00000558532 KRTAP10-10P60014 251 aa1.61□□□□□ -2.15
HERC1-203ENST00000558532 CRIPTQ9P021 101 aa1.61□□□□□ -2.15
HERC1-203ENST00000558532 PLECQ15149 4684 aaKnown RBP1.61□□□□□ -2.15
HERC1-203ENST00000558532 SACSQ9NZJ4 4579 aa1.61□□□□□ -2.15
HERC1-203ENST00000558532 TGP01266 2768 aa1.6□□□□□ -2.15
HERC1-203ENST00000558532 J3QKU1 62 aa1.6□□□□□ -2.15
HERC1-203ENST00000558532 FLG2Q5D862 2391 aaPredicted RBP1.6□□□□□ -2.15
HERC1-203ENST00000558532 DNAH2Q9P225 4427 aa1.6□□□□□ -2.15
HERC1-203ENST00000558532 COL7A1Q02388 2944 aa1.6□□□□□ -2.15
HERC1-203ENST00000558532 DNAH11Q96DT5 4516 aa1.59□□□□□ -2.15
HERC1-203ENST00000558532 SPRR5A0A1B0GTR4 108 aa1.59□□□□□ -2.15
HERC1-203ENST00000558532 C10orf95Q9H7T3 257 aa1.59□□□□□ -2.15
HERC1-203ENST00000558532 S4R3F8 94 aa1.59□□□□□ -2.15
HERC1-203ENST00000558532 CAMK2N1Q7Z7J9 78 aa1.58□□□□□ -2.16
HERC1-203ENST00000558532 FBN3Q75N90 2809 aa1.58□□□□□ -2.16
HERC1-203ENST00000558532 KMT2AQ03164 3969 aa1.58□□□□□ -2.16
HERC1-203ENST00000558532 STARD9Q9P2P6 4700 aa1.58□□□□□ -2.16
HERC1-203ENST00000558532 DNAH5Q8TE73 4624 aa1.57□□□□□ -2.16
HERC1-203ENST00000558532 KRTAP12-1P59990 96 aa1.57□□□□□ -2.16
HERC1-203ENST00000558532 COL6A5A8TX70 2615 aa1.57□□□□□ -2.16
HERC1-203ENST00000558532 STAB1Q9NY15 2570 aa1.56□□□□□ -2.16
HERC1-203ENST00000558532 PKHD1L1Q86WI1 4243 aa1.56□□□□□ -2.16
HERC1-203ENST00000558532 LUZP6Q538Z0 58 aa1.55□□□□□ -2.16
HERC1-203ENST00000558532 MGAM2Q2M2H8 2515 aa1.55□□□□□ -2.16
HERC1-203ENST00000558532 PKHD1P08F94 4074 aa1.53□□□□□ -2.16
HERC1-203ENST00000558532 A0A0D9SG42 100 aa1.53□□□□□ -2.16
HERC1-203ENST00000558532 M0QZ58 72 aa1.53□□□□□ -2.16
HERC1-203ENST00000558532 VPS13BQ7Z7G8 4022 aa1.52□□□□□ -2.17
HERC1-203ENST00000558532 PKD1P98161 4303 aa1.52□□□□□ -2.17
HERC1-203ENST00000558532 LRP1BQ9NZR2 4599 aa1.51□□□□□ -2.17
HERC1-203ENST00000558532 C9orf92A6NGG3 77 aa1.51□□□□□ -2.17
HERC1-203ENST00000558532 KRTAP10-4P60372 401 aaPredicted RBP1.51□□□□□ -2.17
HERC1-203ENST00000558532 PLAC4Q8WY50 150 aa1.51□□□□□ -2.17
HERC1-203ENST00000558532 APOBP04114 4563 aaKnown RBP1.5□□□□□ -2.17
HERC1-203ENST00000558532 TNXBP22105 4242 aa1.49□□□□□ -2.17
HERC1-203ENST00000558532 LRP1Q07954 4544 aaKnown RBP1.48□□□□□ -2.17
HERC1-203ENST00000558532 FAT2Q9NYQ8 4349 aa1.48□□□□□ -2.17
HERC1-203ENST00000558532 MYCBP2O75592 4640 aa1.46□□□□□ -2.18
HERC1-203ENST00000558532 HSPG2P98160 4391 aa1.45□□□□□ -2.18
HERC1-203ENST00000558532 DMBT1Q9UGM3 2413 aaPredicted RBP1.45□□□□□ -2.18
HERC1-203ENST00000558532 KRTAP5-7Q6L8G8 165 aa1.44□□□□□ -2.18
HERC1-203ENST00000558532 FAT1Q14517 4588 aa1.44□□□□□ -2.18
HERC1-203ENST00000558532 PRO2289Q9P1D8 64 aa1.43□□□□□ -2.18
HERC1-203ENST00000558532 FAT3Q8TDW7 4589 aa1.43□□□□□ -2.18
HERC1-203ENST00000558532 DYNC1H1Q14204 4646 aaKnown RBP1.42□□□□□ -2.18
HERC1-203ENST00000558532 R4GN34 69 aa1.4□□□□□ -2.19
HERC1-203ENST00000558532 INE1O15225 51 aa1.39□□□□□ -2.19
HERC1-203ENST00000558532 MUC19Q7Z5P9 8384 aa1.38□□□□□ -2.19
HERC1-203ENST00000558532 HYDINQ4G0P3 5121 aa1.37□□□□□ -2.19
HERC1-203ENST00000558532 DNHD1Q96M86 4753 aa1.37□□□□□ -2.19
HERC1-203ENST00000558532 KRTAP5-8O75690 187 aa1.37□□□□□ -2.19
HERC1-203ENST00000558532 SMR3BP02814 79 aaPredicted RBP1.37□□□□□ -2.19
HERC1-203ENST00000558532 Q5VSD8 79 aa1.37□□□□□ -2.19
HERC1-203ENST00000558532 FLGP20930 4061 aaPredicted RBP1.36□□□□□ -2.19
HERC1-203ENST00000558532 TNP1P09430 55 aa1.35□□□□□ -2.19
HERC1-203ENST00000558532 MT1HL1P0DM35 61 aa1.34□□□□□ -2.19
HERC1-203ENST00000558532 KRTAP19-2Q3LHN2 52 aa1.34□□□□□ -2.19
HERC1-203ENST00000558532 KRTAP8-1Q8IUC2 63 aa1.29□□□□□ -2.2
HERC1-203ENST00000558532 RYR2Q92736 4967 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms